Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007325 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 13894885 ~ 13911848 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K12020 | TRIM44; tripartite motif-containing protein 44 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007325 | True | 753 | mRNA | 0.55 | 2 | 13894885 | 13911848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007323 | NA | coding | downstream | 38488 | 13743970 ~ 13856397 (-) |
| AMCG00007318 | NA | coding | downstream | 207821 | 13677981 ~ 13687064 (-) |
| AMCG00007319 | NA | coding | downstream | 280440 | 13576675 ~ 13614445 (-) |
| AMCG00007320 | NA | coding | downstream | 500459 | 13392900 ~ 13394426 (-) |
| AMCG00007316 | NA | coding | downstream | 629923 | 13062794 ~ 13264962 (-) |
| AMCG00007324 | NA | coding | upstream | 27492 | 13939340 ~ 13940671 (-) |
| AMCG00007330 | NA | coding | upstream | 362212 | 14274060 ~ 14274434 (-) |
| AMCG00007331 | NA | coding | upstream | 374767 | 14286615 ~ 14326500 (-) |
| AMCG00007333 | NA | coding | upstream | 495296 | 14407144 ~ 14425504 (-) |
| AMCG00007340 | NA | coding | upstream | 1023751 | 14935599 ~ 14937527 (-) |
| G22902 | NA | non-coding | downstream | 245108 | 13646531 ~ 13649777 (-) |
| G22901 | NA | non-coding | downstream | 263594 | 13630245 ~ 13631291 (-) |
| G22819 | NA | non-coding | downstream | 900949 | 12993677 ~ 12993936 (-) |
| G22794 | NA | non-coding | downstream | 1801409 | 12081746 ~ 12093476 (-) |
| G22785 | NA | non-coding | downstream | 1987391 | 11907274 ~ 11907494 (-) |
| G22941 | NA | non-coding | upstream | 148922 | 14060770 ~ 14061129 (-) |
| G22942 | NA | non-coding | upstream | 149886 | 14061734 ~ 14062135 (-) |
| G22943 | NA | non-coding | upstream | 151647 | 14063495 ~ 14065298 (-) |
| G22971 | NA | non-coding | upstream | 272854 | 14184702 ~ 14189688 (-) |
| G23011 | NA | non-coding | upstream | 566748 | 14478596 ~ 14480199 (-) |
| G22838 | NA | other | downstream | 542812 | 13351517 ~ 13352073 (-) |
| AMCG00007298 | NA | other | downstream | 3622190 | 10265045 ~ 10272695 (-) |
| AMCG00007299 | NA | other | downstream | 3648139 | 10152480 ~ 10246746 (-) |
| AMCG00007289 | bet1l,LOC107740886 | other | downstream | 3704681 | 10187308 ~ 10190204 (-) |
| AMCG00007282 | NA | other | downstream | 3893720 | 9960062 ~ 10001165 (-) |
| G22931 | LOC100846954 | other | upstream | 33795 | 13945643 ~ 13946065 (-) |
| AMCG00007326 | pamr1,LOC107570358,LOC107710987,LOC107685072 | other | upstream | 69526 | 13981374 ~ 14033212 (-) |
| AMCG00007366 | NA | other | upstream | 2325613 | 16237461 ~ 16314032 (-) |
| AMCG00007365 | cars,LOC107578099,LOC102789774 | other | upstream | 2409149 | 16320997 ~ 16345580 (-) |
| AMCG00007375 | NA | other | upstream | 2557619 | 16469467 ~ 16621905 (-) |
