AMCG00007333


Basic Information

Item Value
gene id AMCG00007333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 14407144 ~ 14425504 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007333
ATGTACAAATCAGAGACAtTCTGGACCATGGTCCGACACAACAGCAGTATAATGAGCATTCCATCAATTGCAAGTATAGAGAGCCAGTTGCCTGCTGCTTGGAGCCCACACTACACCAGCACAGATGTGTCCACTACAGTCCCAGGTTACCCTGGCCGACTGTTGCAGCAGGAGATCCACCCTCAGTTCTGGTCCAAGTTCCAAGTGTGGGAGTGGTTGCAGCAGACACTGGATGTGAACCAAATAGATGCCACAAGCATTCCTTTCCAGAACTTTGATATTGATGGCAGGCAGTTGTGTACCATGAGTTATCAGGATTTCACCAGGGCCGCGGGCAGTGTGGGCCCACTGCTCTTCCAGAGTCTCACAGACATCAAGTGGAATGGTCAGTATGGCAGTGAGCTCTTTGCACCGCTGGACGTTAAGACAGAAGTTGATGAGTTTTCATGTTCCATCCTCCCATTCAAGGAGGAGAGTTGCTACTACAACTGTTCAAATGCagATTTTTTTGACATCAAGACACCCTTTCAGCCTTCAATTGCTATAACAACAGTTCCTTCTAGTCCAGAGGCTAAGAGGCAGCACAGTCGACCTCAGTCTGCACAGGTGAAAAAACACAATCCTCGAGGGACACACCTGTGGGAGTTCATCAGAGATATCTTGTTGAATCCAGAGAGAAATCCTGGTCTGATTAAGTGGGAGGACAGGTCTGAGGGTGTGTTCCGCTTCCTCAAATCAGAAGCTGTGGCCCAGCTCTggggcaagaaaaaaaacaacagcagcatgaCCTATGAGAAACTGAGTCGTGCTATGAGATACTATTATAAACGGGAGATCTTAGAACGTGTGGATGGAAGGAGACTTGTCTACAAATTTGGGAGAAATGCCCGGGGCTGGAAGGAATCAGAAAAGTGATTGGAAACTTTTGAATTCAGCACCATGAAGGGAAGACTTTAATTTATAAGACCATTTCTATGCAGCTATCTTTTACTATtaagtcttttttgttttaatttgctgttgtagtattttgtgtagtttgtgcttcatgtaaaatatatacttttttatcaGATAAAAGCTTTTGGTGTGATGAAATTTCATGGTGGATATTCAAATAGTTTGAATGTGCTGATAACTATCTAACACACAATGGAAATAAGGACCAATAGAAGTCACATATGGACCTGTCTTACCAATGTACCATTTCTCAAAGTTTTCACTGTTGTGTATTTTCATTGACAACTAGATTTTCTGGTCTGCTATGCTGTCTGCTAACAGAAGCAGCAAACCTGCAAACCTGCTCACAAAGGAAATGCGTGTGTTTCAGTTTGTAGACTGATTGAAACAAGACACACCTAAGCTATGTCAAAAAGATAGAATGCAATGTCTATGGGATCCCATTGAAATTAAGCTTTCAATGATGGAGTGATGTCTACATAGGCTTCAAtgataatacaaacaataataaaaataggaGGTGCTGCGTTTGAAAATGTGCTAAcgtacatataataataataataataataataataataataataataataatgattatcaACTCCAGtcaaaactgtttaaatgaCAGATTTAAGACAATATCCAAACAGATTACGTGAATTATCTGAAGAGGTATATTTACCAACTGAAAACGATCTACACGACCTTCCAGACCCTTCAGCTATCCTGTGCACCTCTAGATAGTAGACGTGCAGTCAAGAAGACTGTTTCAAAGTTTCTTATATGAATTGTGAGAAGAGAAGAATTGAGTGgatcatttgtttttgaaatcaattaatcTACATTCCTAATAATCTGGTTGCtttgtagtttaatttaaatcaggtGGGAACTTTTATGTACCAATATATGCTGAACAAGTCAGCACACTGAACTGGAGGAGGTTTCACCATGTCTGCTAATTCCTGTGGAGTCAGTCAATAGAAAAATCCAGTTTTCTAGTAACTCcaggagagaaacagaaagtaCGTGTATAAATAGGGTAGACAGTGGAGGTATATAGCGTGAATCCTCAATAGTGATGCACCTGTTACCATCACCTTTGTAACCAATTGAGAATAATCTTTGGGCATGATTATTTGCataaattcagaaataaaatgatcagTAACATCATATTTTCTAGTAACATTACATACAAGCAATATGTCTCCCATTATCAATACAACACCCTTGGTTCAGCATAGCATACCATATCCTACCAGGACAAACGCCAGGGAGTTGTCTCTTCCACCTATGGGAGTTGCAATGTCATACCTTAATAAAGAAGTTAATGAGACAGGTAAAGGTAAACaattagaacattttaatttcacgCATTTCACCCATCCATCTAGTTTAACCAATATCATCTAAAttccagaaaacacaaaaacatttggtATTTCTTGTAATTGCTTGAGACATattcaaaatgtgcaaaataatcattaaatgcATTGCACATTGCAGTTATGCATCATTACACCTTCCATACCAAAATATTTGTCAATACCCACAGGATTAAGTTGCATTACACATTGCATTACACGATAGTGTTCTTGAATGTCACAATTTTCAGTTTGGACAGCGTCACTATATGTACTCCCTTCCTTGACTGGGACCCCTGGAAGTTCAGTATGTGCAGCTGTTAGCACTCCCAGGGTCGCAGTCATTAGACATAAGAAAGTCAGGCGCTCCATCTGAAATGACCAAGTGCAGTATTTATTCTTTgttgacacacacactgggccTTCTTAAACTAATCAATGTGAAACCATTTTACCTACTGCTTTCTCACTTTGAAGATCTTAAGTGTATACATGTGGCACCGACATTTGTCCTCTCCAATGACCACTCCAGCAAGAGAGAGCCCCTTGAAGTTGCACCCCCCACAAATGGCACAGACAGTGAATTATATCTAATGTatttgtgctacgtttgtgccAGTTTATGccattgaaataaacatttg

Function

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K17102 EHF; ETS homologous factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007333 True 2977 mRNA 0.39 9 14407144 14425504

Neighbor

gene id symbol gene type direction distance location
AMCG00007331 NA coding downstream 80644 14286615 ~ 14326500 (-)
AMCG00007330 NA coding downstream 132710 14274060 ~ 14274434 (-)
AMCG00007324 NA coding downstream 466473 13939340 ~ 13940671 (-)
AMCG00007325 NA coding downstream 495296 13894885 ~ 13911848 (-)
AMCG00007323 NA coding downstream 550747 13743970 ~ 13856397 (-)
AMCG00007340 NA coding upstream 510095 14935599 ~ 14937527 (-)
AMCG00007344 LOC105018338,LOC107562830,LOC107675263,LOC107707530,LOC107085412,LOC103380394,LOC101069290 coding upstream 726924 15152428 ~ 15153708 (-)
AMCG00007347 NA coding upstream 750682 15176186 ~ 15184980 (-)
AMCG00007346 phrf1 coding upstream 763784 15189288 ~ 15210018 (-)
AMCG00007348 NA coding upstream 795593 15221097 ~ 15277958 (-)
G22971 NA non-coding downstream 217456 14184702 ~ 14189688 (-)
G22943 NA non-coding downstream 341846 14063495 ~ 14065298 (-)
G22942 NA non-coding downstream 345009 14061734 ~ 14062135 (-)
G22941 NA non-coding downstream 346015 14060770 ~ 14061129 (-)
G22902 NA non-coding downstream 757367 13646531 ~ 13649777 (-)
G23011 NA non-coding upstream 53092 14478596 ~ 14480199 (-)
G23101 LOC101154678 non-coding upstream 598737 15024241 ~ 15024745 (-)
G23105 NA non-coding upstream 705884 15131388 ~ 15131598 (-)
G23225 LOC103376870 non-coding upstream 1309121 15734625 ~ 15800952 (-)
G23250 NA non-coding upstream 1642579 16068083 ~ 16069464 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 373932 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 461079 13945643 ~ 13946065 (-)
G22838 NA other downstream 1055071 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 4134449 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 4216940 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 1811957 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 1895493 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 2043963 16469467 ~ 16621905 (-)
G23661 NA other upstream 3629966 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 3776955 18202459 ~ 18208020 (-)

Expression


Co-expression Network