Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007337 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 14478673 ~ 14489692 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007337 | False | 360 | mRNA | 0.46 | 2 | 14478763 | 14479838 |
| TU28829 | True | 372 | TUCP | 0.50 | 3 | 14478673 | 14489692 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007335 | cat,LOC102293936 | coding | upstream | 4980 | 14439326 ~ 14473693 (+) |
| AMCG00007332 | apip | coding | upstream | 94754 | 14365708 ~ 14383919 (+) |
| AMCG00007329 | slc1a2,LOC107570361 | coding | upstream | 293099 | 14158184 ~ 14185574 (+) |
| AMCG00007327 | NA | coding | upstream | 414591 | 14049393 ~ 14064082 (+) |
| AMCG00007328 | NA | coding | upstream | 496820 | 13975305 ~ 13981853 (+) |
| AMCG00007336 | NA | coding | downstream | 10163 | 14499855 ~ 14503459 (+) |
| AMCG00007334 | NA | coding | downstream | 28162 | 14517854 ~ 14522839 (+) |
| AMCG00007339 | NA | coding | downstream | 55203 | 14544895 ~ 14572261 (+) |
| AMCG00007338 | kcnq1,LOC106562471,LOC104956027,LOC101161541 | coding | downstream | 141070 | 14630762 ~ 14660061 (+) |
| AMCG00007341 | kcnq1,LOC106562821,LOC105889017,LOC102797067,LOC102292488 | coding | downstream | 171986 | 14661678 ~ 14893147 (+) |
| G22979 | NA | non-coding | upstream | 188048 | 14286133 ~ 14290625 (+) |
| G22962 | NA | non-coding | upstream | 263617 | 14176735 ~ 14215056 (+) |
| G22944 | NA | non-coding | upstream | 413029 | 14065371 ~ 14065644 (+) |
| G22940 | NA | non-coding | upstream | 413465 | 14064950 ~ 14065208 (+) |
| G22935 | NA | non-coding | upstream | 437613 | 14040792 ~ 14041060 (+) |
| G23100 | NA | non-coding | downstream | 534534 | 15024226 ~ 15024688 (+) |
| G23130 | NA | non-coding | downstream | 727484 | 15217176 ~ 15309751 (+) |
| G23154 | mob2,LOC108411394 | non-coding | downstream | 1180250 | 15669942 ~ 15753760 (+) |
| G23189 | NA | non-coding | downstream | 1541072 | 16030764 ~ 16067082 (+) |
| G23263 | NA | non-coding | downstream | 1662768 | 16152460 ~ 16157347 (+) |
| AMCG00007307 | clg19h11orf96 | other | upstream | 3865569 | 10611196 ~ 10613104 (+) |
| AMCG00007278 | NA | other | upstream | 4513406 | 9936920 ~ 9965267 (+) |
| G22372 | NA | other | upstream | 4978945 | 9436524 ~ 9499728 (+) |
| AMCG00007253 | calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 | other | upstream | 5767362 | 8697983 ~ 8711311 (+) |
| AMCG00007242 | NA | other | upstream | 6027091 | 8431102 ~ 8451582 (+) |
| AMCG00007352 | NA | other | downstream | 787019 | 15276711 ~ 15287960 (+) |
| AMCG00007350 | tsg101 | other | downstream | 876969 | 15366661 ~ 15379965 (+) |
| AMCG00007379 | NA | other | downstream | 2134698 | 16624390 ~ 16662700 (+) |
| AMCG00007417 | NA | other | downstream | 3708926 | 18198618 ~ 18201960 (+) |
| G23698 | fem1b | other | downstream | 3717386 | 18207078 ~ 18208308 (+) |
