AMCG00007347


Basic Information

Item Value
gene id AMCG00007347
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15176186 ~ 15184980 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007347
ATGTGCAgTCTTCTACAGGCCAAAATAGCCGATTGgtcaaaaagaaaattgaaagtACTGCCCCAGGAAGTCTTGGAAGACATCAACATTTTCAGCCTTAACCTAGAAAGGAACCGATTTAAAGATGTGAGTGGCATCTCTAAACTGATCAATCTAAAGGAACTCACTTTATCACGCAATGAATTTGTTGAGTTTCCCTCGGAAATCCAGTTTCTGGTCAACCTGGAGAAGCTTTACTTGAACCAGAATAAGATCCAAAGCATCCCTGAAGAAATCTTCCCCAAGCTGCAGAAGTTAGAGCTGCTGAAGCTCAGCACCAACCGCTTGAGCAAACTGCCCACTGACCTCCGCTGCTGCAAGAACCTCCTACACCTCGGACTCTCCCACAACTACCTGAAGGAGCTGACCGAGGCTGTGGTGGGGCTGCCCAGCCTGCGGGAGCTCTATGTGGACAATAACCGTCTTTCCGAGCTTCCTGCCGAGCTTTTCAACAACAAGAGCCTGGTGACTTTCAGGGCAGCCTCCAACCGCCTTCGGGAGCCCCCGGATGAGGTCTGCATCGGGGGGCTGAAGCAGATCCGGAGCTACTTCAAGCAGCTAAAGTTATCCCAGCCGGATTTTGTGCGCAGGGTGAAGACCATGTTCCTGGGCTCCTCCATGGCGGGCAAGTCAACCCTGTGCCGCAGCCTGAAGGACAGACAGCCAGTGATGGTGGACGTCAAGGACCGCACTGTGGGGATTGAGATCAGCGAGGTGCAAATAGAGGGCTTCCGCTTCCTCTTCTGGGACTTTGCTGGCCAGGAAGAGTACTACCTTACCCACCATGTCTTCATCACCCCTCAGGCCCTGGTAATCCTGGTGATCGACCTAGCCAGCTACAATATTGATGACCCGCAGTCATTCAAAGAGAAAGTCAGCTTCTGGATTAATAACGTGATGATGAGAGTTCCTGATTCCGTCATCCTGCCGGTGGGAACTCACATTGACAAGTGTAGAGATGACAGGGAGGTGCAAGAGAAGAAATGCGACATTGGGGACAAAATCAAAGACATGCTGGCGAAGAGGGAACTCATGTTGGATCAACGCAGAAAGAACATCGATGACAAAATCGAGCCAAAGCTGTTTTCTGATCAGTCAAACAAACTTGATCAGGTGGCCAGCTATAGCTTAAAGTGCCTCGACCTTGTTCCCATTGACTGCACAAATTACAAGGATATCGAACAGCTCCAAGAGAAGATTCTGGACTTCGTGCAAGATATTGAGACATTTCCGAATGTAGTGAAAAAGCTCCCTCATATCTACCAAGCAGTGGAGTCCGCAATCGAGGACCTCATTAAAGACAACCAATTTCCTAAGCATGGCATTGTTTCCCTGACCCAACTCTTGACAGACATAAAACAGAAAGTTGGGAAGCTTGATGAAGACGACCTTAAGGGAATCTTGCGCTACCTTCATTACATCGGCATCATAATCATTGTCCGGCTTGACCTGAAGGAGCAGCTGGAGTGCATTCCCCGGGAGCTGCTGTTGACCGAGAACTCCCTGGTCAAGGACAGGAATATGTGGGCGGAGGATTTCCACAGCAAAGCCACTCTCCACAGCACGGCTATGCGGTTGCTGGTAAAAATGACTCTCCAGAAGGGCAACATCTCCGAGGATGAGGACTTTGTGGAGGAGATCGCTGGCACCAGGCACGAGAAAAGCAAGCTCCTCAGCCTCTTAGAGCACTTTGAGATCTGCCTGCCTGCCACACCCACGAAAGCCCTCAATCCACAGGCCAGAGAGTTTGTTCCACATCAGCAGTGGCGCAAGTCTGGAACCGAAGCCCCGACAAAAGCCTGTCTCTTTCCCAGCCTGTTAAAACACAACTCGACAGTCTCCAGAATGTGGGGCGAAGACAAACTGACCGATGTCAGAGTGCGCATCTACTTCCTTCCAGAAATTCCTCATGGTTTCTTCCATAGGCTCATCATCAAGGCATGCTCCCTGTATGCACCTTACTGGGTAGGACAAGAGCAGTGCCTGGTCATGTGCAACGCAAAGCCCCTGCTGTTTAAACAAAACTGCGAAGAAGATCAGTTCATTGAGATTCGCTACAGGAGACCTGAAGATAACAAATTCCAGCAGATGTGGGACATGATTCAGGCCATTATCCAGAAGATAAAGACTCTGATGGAGCAGTGGCCTGGCCTGTGTCAACACATATGCAGCCCTTGCACAGTGCCAAACTGTTCTGCAGACTACGAATGGACAGATCTGAGCGGATCAGATGACATCTATGACATGTACGTACCCAGTGCATCAGACTCTGAAGCGAAGAATGCACAAAATAACACCTTCTATATGACTGGGAATATCTCCATGGGCTCGGGAACTCAGAGTGTCAATAATCAGGTAattcatttgtgtttcagtACTATAAAGCAACACATCCCTTTATCATTCTTtctctaattaaaatgtgatcatATTCagtaaaatcaaactaaatctataaatattgtaaatccTTAAAGATGAGCAACgcttgagattttttttttttagaattcaTATCAGAATGCGTATTTGTAATCCAcaatttttatttcagtctgtATTTTTGTCAGTATATCAGTAAAGAATTGCACtcagacatttgcatttttcaaaaggTGTGTTGATTGTAAACTTCGAGAAAACGGACTGGTTTGAATCACCTcccttcctttttaaaatagattGTATAATACTGTTTAAATGAAGAACACAGCTATTGAAAATGTTCACTTCTGTAAAGCAAGGAAATGtagtaaataacatttttccTGCTAGAACTTTATAATACACTCTTGACTGTCATTATATTCAGCACTGGGTTGGGCTCTCCTAAACACTTAGAGCAGCAGGTTTTGAAAACACTCAGGGGCTAATGGAAGATTTAAAAGCACTGAGGTATTAAGTAACCTATCTGCCAGTTCTGACAGATGACTCTAATATAAATCCTAGGTGTTATATAAAACCAATATACAGTTATCAGCGTGTTGCTGCTTCCTATCAGACTGCCAATATTGCGGTCAAATCACCTGACTTACTTTATGGATATATGCCTGTTGTTTGCGTaatgatttacatttaacatatgttttatttgttttgcttttccttcaGAGTTTTCAAGATCATCAAAGTAATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007347 True 3176 mRNA 0.45 9 15176186 15184980

Neighbor

gene id symbol gene type direction distance location
AMCG00007344 LOC105018338,LOC107562830,LOC107675263,LOC107707530,LOC107085412,LOC103380394,LOC101069290 coding downstream 22478 15152428 ~ 15153708 (-)
AMCG00007340 NA coding downstream 238659 14935599 ~ 14937527 (-)
AMCG00007333 NA coding downstream 750682 14407144 ~ 14425504 (-)
AMCG00007331 NA coding downstream 849686 14286615 ~ 14326500 (-)
AMCG00007330 NA coding downstream 901752 14274060 ~ 14274434 (-)
AMCG00007346 phrf1 coding upstream 4308 15189288 ~ 15210018 (-)
AMCG00007348 NA coding upstream 36117 15221097 ~ 15277958 (-)
AMCG00007349 NA coding upstream 103360 15288340 ~ 15313433 (-)
AMCG00007353 LOC107707550,LOC106953705,LOC103466147,LOC101079446,LOC106515651,LOC108239988 coding upstream 192638 15377618 ~ 15385002 (-)
AMCG00007359 mob2,LOC108411394 coding upstream 565128 15750108 ~ 15756250 (-)
G23105 NA non-coding downstream 44588 15131388 ~ 15131598 (-)
G23101 LOC101154678 non-coding downstream 151441 15024241 ~ 15024745 (-)
G23011 NA non-coding downstream 695987 14478596 ~ 14480199 (-)
G22971 NA non-coding downstream 986498 14184702 ~ 14189688 (-)
G22943 NA non-coding downstream 1110888 14063495 ~ 14065298 (-)
G23225 LOC103376870 non-coding upstream 549645 15734625 ~ 15800952 (-)
G23250 NA non-coding upstream 883103 16068083 ~ 16069464 (-)
G23344 NA non-coding upstream 1193538 16378518 ~ 16380291 (-)
G23379 NA non-coding upstream 1475901 16660881 ~ 16662665 (-)
G23397 NA non-coding upstream 1521309 16706289 ~ 16709180 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 1142974 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 1230121 13945643 ~ 13946065 (-)
G22838 NA other downstream 1824113 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 4903491 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 4985982 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 1052481 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 1136017 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 1284487 16469467 ~ 16621905 (-)
G23661 NA other upstream 2870490 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 3017479 18202459 ~ 18208020 (-)

Expression


Co-expression Network