AMCG00007349


Basic Information

Item Value
gene id AMCG00007349
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15288340 ~ 15313433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007349
CTCCCATGAAGCATTGCGTGCCCCAGTCTCCAGGAAGTCAAATCCCGTTGCTAACCAAACGAGTATAGCCACACATCTCATACTGATATGACAATAAAATGCGTTAGCTTGACTTTGAATTTGTAAGGTACTGCAGTAGTGTGATGCAGGATTGTCTGTCCACTATGCGGCCTGTCACAGCACGGATGAGGGTGACAGAGTTCACGGGATCAGACCAGCTGAACCCCAGCCCTCTGGTTTACGAAGACACCGACCTGCTAGTGGAGCAGTATCTGACTCCAGACAAACTGCAAGCCTTGACAGGGACAGAAGATCTACAACAAGTAAAAGTCCTGGACATGTGTGTGGACACCCGAGAAAACACTCTGGGCAACTTTGGTATCTATTTGCCCAGCCTTATCCAACTGAAGATGAACAACAGTCTGATAGTGTCTGTGAGGGACCTCGGAACAACCCTCTCCCACCTGCAGGTCTTATGGATGGCCCGCTGTGGCCTGGCTGACTTGGATGGGATACCCTCGTTCTCTTCTCTGAAGGAACTGTACCTGGCCTACAATGACATTTCGGATCTGAGTCAGGTGAGCTTACTGGACAACCTGGAGATTCTGGATCTGGAGGGGAACAACATCGATGACATCACCCAGGTTCAGTATCTGGGACTGTGCTGCCAGCTGAACACATTAACCTTGGAAGGCAATCCAATCTGCTCACGACCACATCCAGATTCCCCTGAGTCCCAGCAATACAGCTACCGGGTCGCTGTCAGAGAGCTGGTTCCACAGCTGCAGTATCTGGATGATGTCCCTGCTGATCGCATGGACCTTCTATCCAGGTGCACCACCAGCCAGGACTGGGTTATAGTCAAAGAGTCCATCAAGGACAGCATCTGGCCAGACGGTCTGGATGTACAGGAAGAAGCTGAAGCCACCATCTCTGGCAGGCCCTCCACCGGTCTGCGACCAGGCACCGGTCGCCCCAGCTCGGCCTGCAGGGTTTTGGCGACTTCCAGGCCTCTCAGTGCCAGCCGCCCCAGCAGTGCCAGGCCCCTCTCCTCCCCCAGCTCTCGCCCAGGCTCCTCTGAATCCGACACGGCATCTCTCGAGCAGGATGCCAGCAGTCTAACCCATGGTGTCGGAAGGGTAATTTGTGGCAATCCTGTAAAAGCTCTTTGCGCGCGGAGGCAGAAACTGAACCTTTCTTCCAGACTTCACTCAGACCCACTGGCACCGCACAAGTATATTCCAGAGCACACCTATAGCATCGAAGACCTGGAAATCAAGAACAGAGAGGATTTGTTTGCCGAACTTAGGACGTGGAGAAAAGAACACATCaaACGTCTAGAAGCCATTCAAAAGGAGCGAGAGCCCCAGATTCTGAAGATCTCCCACAGTCCTGAGGAAGAGGGGGCCGGCAGTCTCAGTGACTGCAGTGAGGAAGGGGAGATCAGCGGAGCCTGTGGCAGTGACTGGTCCAGCAGGGCCTCGCCAGACTCCGCTTTCCAGTCCCCTGAGTGCCAATCCGCTTACCCAGAGAGAGTGGTCACATCCCCTGAAGTCCTGCGCCAGTCTGTATCGCCGGTGTCCCCAGTgtctccgtctccccctcccccccgctcAGCGCCCCCTGCAGTCCGTAGGGTCTCAGAGACCGGGGCGAGACGTCTGCGGATCCCCGTCTCACAGCAGGAGCAGAAGAGCCCCCAGTACAGAGACTCTGCTGTGGCCCTGTGCCCAGATGAGGAGGTTACTTTGCTGGAGCCACAGAGAGTAAGCCCAGAGCACAAGACAGAGTGGTACAAAGCTCAGCAGGGCCGGAGAGTGGGGCCTGGCAGCGGCGCTGACTCCCTCAGACCAGAGTCTGGACCAGCAGCTATAGGGGTCAGCAATCACAGtgctcaGGCGGAGAGATCGTCTGTAAAACACAGTGACCGCCACCAGCCCATTATCCGCTCCTCGGTGAAGACCCCAGAGGGAGCTTTGCCACTGTCCCCGGCCCGTCCTCTCACAGCCAGGGCAGTCCTGCAGAGACTGCCCAACAGAGCGCCACTGCTGCCCAGCCGGGGCAGCACCACCTCCAGCTGAGAGCAGGGGGTCGCCACTCTCTGAGACTGGCCTCAGTCCCCAGGGCTGGGGTACAATACAGAagtggtctccagccctggtcttgGGGAGCTGCAGTCCAGTACGTTTTCCAGATCACCCCTAAACCATCAGCTTCCAAAGACGGGCAACACTTGTTAGTTATTCATCAGTTAAGCAAAGGGGTTGCTCTATAAAGGACACCCTGGTCCCTGAGGGCTGAAGGCACAAATGCAGGTGATCTCTGAGTTATTGAGGTGACCAGTCTTcccattaacattttcatttttcggTCCATTCAGATATTTGAAGTTTGAAACTCATGAATTGACCCAGTGTGCGTTTCTTTAGATTAGACAGCTGAGCTCTGGTTGTTAACAGCACTCAAATGTACCTCAGTAcctcaaatatatttattaaagttgCCAAATTTCAGTGATCTGTAACATCTCAGTAAAGGTAACAAACCAAGACAATAGCCTGGATTTAGCTCATCTTGGACCCATTTGTCAGATGATTTACCCAGTACTTggacagctggtttcacagacccagattagctcTAGTCATGGACTATCTATCCGATGTTATTACAGTAGTTCTTGAATTGTGCTCGTTGAGCTCTGTGTAACCAACCAAAAGACTTCTAACCCATGGCGATCCTCCATCAAGTACTGGTTAGTCAATGTTTAATTGGCAAATAGGTCCAAATCAGatgattttatttctgcagcATAATGGTTCATCCCAAGactttttatttgtcttatttaagGGTGCGTCATCAGTTCAGAAGCAAACCCTGCCATGGAAAGCTTAAACACATCTGGAGTGTGCAGGGTGACAGGGATTGCAGTCACAGTACTGCTAAAACATTACTTGTCTGTTGGTTCCAATTTATTTAATCGATGATTTTTCGGATTACTTTTACTAatggtatttttatatttattgttgtgaCTCATGTTAGTGCACGCTATGTAATTGCTCTGTCATGACCCTGGTAATAAATTTGTAATTTGTCTCATAGAAGTGTGAGAGATTAACTAAAGGATAAGATGTTATTGTTTGTCTTTCATCATGTCTGGCACACTAGTGGTATAAACTGCATACACCTCTCACTTCTGTctcttggaaaataaatatagaacaaCATCTTCAACAAATGTGATGGATCACCTGTCTATAAATGTTATGActaaaatgatttgtattttctgaagaagagtattgatttatatatagatataaatattgtatacatattgttgttGGGATAGCTGTGTTAATCCTTTTGAAGGAATTTTAGCATCATTCTAACTgttaaagtttttaaattgatctGAATCGaatactttttgtttgtgaatgtttttgCCCTAACCTGGGTCCAGTGCAtgatttatttagaaaacaaaagtcc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007349 True 3501 mRNA 0.49 13 15288340 15313433

Neighbor

gene id symbol gene type direction distance location
AMCG00007348 NA coding downstream 10382 15221097 ~ 15277958 (-)
AMCG00007346 phrf1 coding downstream 78322 15189288 ~ 15210018 (-)
AMCG00007347 NA coding downstream 103360 15176186 ~ 15184980 (-)
AMCG00007344 LOC105018338,LOC107562830,LOC107675263,LOC107707530,LOC107085412,LOC103380394,LOC101069290 coding downstream 134632 15152428 ~ 15153708 (-)
AMCG00007340 NA coding downstream 350813 14935599 ~ 14937527 (-)
AMCG00007353 LOC107707550,LOC106953705,LOC103466147,LOC101079446,LOC106515651,LOC108239988 coding upstream 64185 15377618 ~ 15385002 (-)
AMCG00007359 mob2,LOC108411394 coding upstream 436675 15750108 ~ 15756250 (-)
AMCG00007358 mob2,LOC102782240,LOC108411394,LOC106561048 coding upstream 442860 15756293 ~ 15775512 (-)
AMCG00007361 NA coding upstream 561534 15874967 ~ 15890365 (-)
AMCG00007363 LOC108428835 coding upstream 620714 15934147 ~ 15938530 (-)
G23105 NA non-coding downstream 156742 15131388 ~ 15131598 (-)
G23101 LOC101154678 non-coding downstream 263595 15024241 ~ 15024745 (-)
G23011 NA non-coding downstream 808141 14478596 ~ 14480199 (-)
G22971 NA non-coding downstream 1098652 14184702 ~ 14189688 (-)
G22943 NA non-coding downstream 1223042 14063495 ~ 14065298 (-)
G23225 LOC103376870 non-coding upstream 421192 15734625 ~ 15800952 (-)
G23250 NA non-coding upstream 754650 16068083 ~ 16069464 (-)
G23344 NA non-coding upstream 1065085 16378518 ~ 16380291 (-)
G23379 NA non-coding upstream 1347448 16660881 ~ 16662665 (-)
G23397 NA non-coding upstream 1392856 16706289 ~ 16709180 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 1255128 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 1342275 13945643 ~ 13946065 (-)
G22838 NA other downstream 1936267 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 5015645 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 5098136 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 924028 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 1007564 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 1156034 16469467 ~ 16621905 (-)
G23661 NA other upstream 2742037 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 2889026 18202459 ~ 18208020 (-)

Expression


Co-expression Network