AMCG00007355 (LOC105029471,LOC102789834,LOC107090945,LOC106925402)


Basic Information

Item Value
gene id AMCG00007355
gene name LOC105029471,LOC102789834,LOC107090945,LOC106925402
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15613795 ~ 15623775 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007355
gtGGAGCGGGAGATCGCCATTCTGAAGCTCATAGAACACCCTCACGTTTTAAAGTTGCACGACGTCTacgaaaataaaaaatatttGTATTTGGTTTTAGAGCACGTGTCTGGTGGGGAACTTTTCGACTACCTGGTAAAAAAGGGGAGGTTAACGCCTAAAGAAGCCAGAAAATTCTTCCGACAGATCATCTCCGCGCTCGATTTTTGCCACAGCCATTCAATA

Function

NR:

description
PREDICTED: serine/threonine-protein kinase BRSK2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007355 True 225 mRNA 0.44 2 15613795 15623775

Neighbor

gene id symbol gene type direction distance location
AMCG00007354 NA coding upstream 34564 15492041 ~ 15579231 (+)
AMCG00007351 hras,LOC107675296,LOC103357265 coding upstream 264253 15332608 ~ 15349542 (+)
AMCG00007345 NA coding upstream 441318 15166463 ~ 15172477 (+)
AMCG00007342 ptdss2 coding upstream 597260 14977530 ~ 15016535 (+)
AMCG00007343 NA coding upstream 641558 14945229 ~ 14972237 (+)
AMCG00007356 LOC108275078,LOC108439244,LOC106560719 coding downstream 18120 15641895 ~ 15667423 (+)
AMCG00007357 brsk2b,LOC102314217,LOC102209371,LOC101068155,LOC107696635 coding downstream 55547 15679322 ~ 15691676 (+)
AMCG00007360 NA coding downstream 270989 15894764 ~ 15915649 (+)
AMCG00007370 NA coding downstream 457348 16081123 ~ 16100369 (+)
AMCG00007368 LOC103371360 coding downstream 566412 16190187 ~ 16222036 (+)
G23130 NA non-coding upstream 304044 15217176 ~ 15309751 (+)
G23100 NA non-coding upstream 589107 15024226 ~ 15024688 (+)
G22979 NA non-coding upstream 1323170 14286133 ~ 14290625 (+)
G22962 NA non-coding upstream 1398739 14176735 ~ 14215056 (+)
G22944 NA non-coding upstream 1548151 14065371 ~ 14065644 (+)
G23154 mob2,LOC108411394 non-coding downstream 46167 15669942 ~ 15753760 (+)
G23189 NA non-coding downstream 406989 16030764 ~ 16067082 (+)
G23263 NA non-coding downstream 528685 16152460 ~ 16157347 (+)
G23294 NA non-coding downstream 669329 16293104 ~ 16296008 (+)
G23322 NA non-coding downstream 732915 16356690 ~ 16411211 (+)
AMCG00007350 tsg101 other upstream 233830 15366661 ~ 15379965 (+)
AMCG00007352 NA other upstream 325835 15276711 ~ 15287960 (+)
AMCG00007337 NA other upstream 1124103 14478673 ~ 14489692 (+)
AMCG00007307 clg19h11orf96 other upstream 5000691 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 5648528 9936920 ~ 9965267 (+)
AMCG00007379 NA other downstream 1000615 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 2574843 18198618 ~ 18201960 (+)
G23698 fem1b other downstream 2583303 18207078 ~ 18208308 (+)
AMCG00007414 NA other downstream 2593955 18217730 ~ 18224936 (+)
G23724 NA other downstream 2666333 18290108 ~ 18292338 (+)

Expression


Co-expression Network