Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007367 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 16249097 ~ 16266529 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005215 | transporter activity | molecular_function |
| id | description |
|---|---|
| K08214 | SLC22A18; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 18 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007367 | True | 729 | mRNA | 0.49 | 6 | 16249097 | 16266529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007369 | NA | coding | upstream | 21074 | 16225938 ~ 16228023 (+) |
| AMCG00007368 | LOC103371360 | coding | upstream | 27061 | 16190187 ~ 16222036 (+) |
| AMCG00007370 | NA | coding | upstream | 148728 | 16081123 ~ 16100369 (+) |
| AMCG00007360 | NA | coding | upstream | 333448 | 15894764 ~ 15915649 (+) |
| AMCG00007357 | brsk2b,LOC102314217,LOC102209371,LOC101068155,LOC107696635 | coding | upstream | 557421 | 15679322 ~ 15691676 (+) |
| AMCG00007371 | nap1l4,LOC100702699,LOC106905261,LOC108237555,LOC106959919,LOC103466161 | coding | downstream | 35339 | 16301868 ~ 16303118 (+) |
| AMCG00007372 | NA | coding | downstream | 80982 | 16347511 ~ 16381216 (+) |
| AMCG00007377 | NA | coding | downstream | 417147 | 16683676 ~ 16692219 (+) |
| AMCG00007378 | NA | coding | downstream | 430743 | 16697272 ~ 16709296 (+) |
| AMCG00007381 | NA | coding | downstream | 495188 | 16761717 ~ 16765628 (+) |
| G23263 | NA | non-coding | upstream | 91750 | 16152460 ~ 16157347 (+) |
| G23189 | NA | non-coding | upstream | 182015 | 16030764 ~ 16067082 (+) |
| G23154 | mob2,LOC108411394 | non-coding | upstream | 495337 | 15669942 ~ 15753760 (+) |
| G23130 | NA | non-coding | upstream | 939346 | 15217176 ~ 15309751 (+) |
| G23100 | NA | non-coding | upstream | 1224409 | 15024226 ~ 15024688 (+) |
| G23294 | NA | non-coding | downstream | 26575 | 16293104 ~ 16296008 (+) |
| G23322 | NA | non-coding | downstream | 90161 | 16356690 ~ 16411211 (+) |
| G23432 | NA | non-coding | downstream | 701333 | 16967862 ~ 16968068 (+) |
| G23433 | igf2b,igf2,LOC105904486 | non-coding | downstream | 703276 | 16969805 ~ 16973419 (+) |
| G23449 | NA | non-coding | downstream | 781401 | 17047930 ~ 17048318 (+) |
| AMCG00007350 | tsg101 | other | upstream | 869132 | 15366661 ~ 15379965 (+) |
| AMCG00007352 | NA | other | upstream | 961137 | 15276711 ~ 15287960 (+) |
| AMCG00007337 | NA | other | upstream | 1759405 | 14478673 ~ 14489692 (+) |
| AMCG00007307 | clg19h11orf96 | other | upstream | 5635993 | 10611196 ~ 10613104 (+) |
| AMCG00007278 | NA | other | upstream | 6283830 | 9936920 ~ 9965267 (+) |
| AMCG00007379 | NA | other | downstream | 357861 | 16624390 ~ 16662700 (+) |
| AMCG00007417 | NA | other | downstream | 1932089 | 18198618 ~ 18201960 (+) |
| G23698 | fem1b | other | downstream | 1940549 | 18207078 ~ 18208308 (+) |
| AMCG00007414 | NA | other | downstream | 1951201 | 18217730 ~ 18224936 (+) |
| G23724 | NA | other | downstream | 2023579 | 18290108 ~ 18292338 (+) |
