Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007369 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 16225938 ~ 16228023 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005215 | transporter activity | molecular_function |
| id | description |
|---|---|
| K08214 | SLC22A18; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 18 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007369 | True | 462 | mRNA | 0.53 | 4 | 16225938 | 16228023 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007368 | LOC103371360 | coding | upstream | 3902 | 16190187 ~ 16222036 (+) |
| AMCG00007370 | NA | coding | upstream | 125569 | 16081123 ~ 16100369 (+) |
| AMCG00007360 | NA | coding | upstream | 310289 | 15894764 ~ 15915649 (+) |
| AMCG00007357 | brsk2b,LOC102314217,LOC102209371,LOC101068155,LOC107696635 | coding | upstream | 534262 | 15679322 ~ 15691676 (+) |
| AMCG00007356 | LOC108275078,LOC108439244,LOC106560719 | coding | upstream | 558515 | 15641895 ~ 15667423 (+) |
| AMCG00007367 | NA | coding | downstream | 21074 | 16249097 ~ 16266529 (+) |
| AMCG00007371 | nap1l4,LOC100702699,LOC106905261,LOC108237555,LOC106959919,LOC103466161 | coding | downstream | 73845 | 16301868 ~ 16303118 (+) |
| AMCG00007372 | NA | coding | downstream | 119488 | 16347511 ~ 16381216 (+) |
| AMCG00007377 | NA | coding | downstream | 455653 | 16683676 ~ 16692219 (+) |
| AMCG00007378 | NA | coding | downstream | 469249 | 16697272 ~ 16709296 (+) |
| G23263 | NA | non-coding | upstream | 68591 | 16152460 ~ 16157347 (+) |
| G23189 | NA | non-coding | upstream | 158856 | 16030764 ~ 16067082 (+) |
| G23154 | mob2,LOC108411394 | non-coding | upstream | 472178 | 15669942 ~ 15753760 (+) |
| G23130 | NA | non-coding | upstream | 916187 | 15217176 ~ 15309751 (+) |
| G23100 | NA | non-coding | upstream | 1201250 | 15024226 ~ 15024688 (+) |
| G23294 | NA | non-coding | downstream | 65081 | 16293104 ~ 16296008 (+) |
| G23322 | NA | non-coding | downstream | 128667 | 16356690 ~ 16411211 (+) |
| G23432 | NA | non-coding | downstream | 739839 | 16967862 ~ 16968068 (+) |
| G23433 | igf2b,igf2,LOC105904486 | non-coding | downstream | 741782 | 16969805 ~ 16973419 (+) |
| G23449 | NA | non-coding | downstream | 819907 | 17047930 ~ 17048318 (+) |
| AMCG00007350 | tsg101 | other | upstream | 845973 | 15366661 ~ 15379965 (+) |
| AMCG00007352 | NA | other | upstream | 937978 | 15276711 ~ 15287960 (+) |
| AMCG00007337 | NA | other | upstream | 1736246 | 14478673 ~ 14489692 (+) |
| AMCG00007307 | clg19h11orf96 | other | upstream | 5612834 | 10611196 ~ 10613104 (+) |
| AMCG00007278 | NA | other | upstream | 6260671 | 9936920 ~ 9965267 (+) |
| AMCG00007379 | NA | other | downstream | 396367 | 16624390 ~ 16662700 (+) |
| AMCG00007417 | NA | other | downstream | 1970595 | 18198618 ~ 18201960 (+) |
| G23698 | fem1b | other | downstream | 1979055 | 18207078 ~ 18208308 (+) |
| AMCG00007414 | NA | other | downstream | 1989707 | 18217730 ~ 18224936 (+) |
| G23724 | NA | other | downstream | 2062085 | 18290108 ~ 18292338 (+) |
