Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007379 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 16624390 ~ 16662700 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007379 | True | 3993 | mRNA | 0.54 | 25 | 16624390 | 16662560 |
| TU29282 | False | 1827 | lncRNA | 0.37 | 1 | 16660874 | 16662700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007372 | NA | coding | upstream | 243174 | 16347511 ~ 16381216 (+) |
| AMCG00007371 | nap1l4,LOC100702699,LOC106905261,LOC108237555,LOC106959919,LOC103466161 | coding | upstream | 321272 | 16301868 ~ 16303118 (+) |
| AMCG00007367 | NA | coding | upstream | 357861 | 16249097 ~ 16266529 (+) |
| AMCG00007369 | NA | coding | upstream | 396367 | 16225938 ~ 16228023 (+) |
| AMCG00007368 | LOC103371360 | coding | upstream | 402354 | 16190187 ~ 16222036 (+) |
| AMCG00007377 | NA | coding | downstream | 20976 | 16683676 ~ 16692219 (+) |
| AMCG00007378 | NA | coding | downstream | 34572 | 16697272 ~ 16709296 (+) |
| AMCG00007381 | NA | coding | downstream | 99017 | 16761717 ~ 16765628 (+) |
| AMCG00007382 | NA | coding | downstream | 128935 | 16791635 ~ 16799244 (+) |
| AMCG00007383 | LOC108275360,LOC105008177 | coding | downstream | 145564 | 16808264 ~ 16836323 (+) |
| G23322 | NA | non-coding | upstream | 213179 | 16356690 ~ 16411211 (+) |
| G23294 | NA | non-coding | upstream | 328382 | 16293104 ~ 16296008 (+) |
| G23263 | NA | non-coding | upstream | 467043 | 16152460 ~ 16157347 (+) |
| G23189 | NA | non-coding | upstream | 557308 | 16030764 ~ 16067082 (+) |
| G23154 | mob2,LOC108411394 | non-coding | upstream | 870630 | 15669942 ~ 15753760 (+) |
| G23432 | NA | non-coding | downstream | 305162 | 16967862 ~ 16968068 (+) |
| G23433 | igf2b,igf2,LOC105904486 | non-coding | downstream | 307105 | 16969805 ~ 16973419 (+) |
| G23449 | NA | non-coding | downstream | 385230 | 17047930 ~ 17048318 (+) |
| G23497 | NA | non-coding | downstream | 689872 | 17352572 ~ 17352790 (+) |
| G23515 | NA | non-coding | downstream | 812263 | 17474963 ~ 17479749 (+) |
| AMCG00007350 | tsg101 | other | upstream | 1244425 | 15366661 ~ 15379965 (+) |
| AMCG00007352 | NA | other | upstream | 1336430 | 15276711 ~ 15287960 (+) |
| AMCG00007337 | NA | other | upstream | 2134698 | 14478673 ~ 14489692 (+) |
| AMCG00007307 | clg19h11orf96 | other | upstream | 6011286 | 10611196 ~ 10613104 (+) |
| AMCG00007278 | NA | other | upstream | 6659123 | 9936920 ~ 9965267 (+) |
| AMCG00007417 | NA | other | downstream | 1535918 | 18198618 ~ 18201960 (+) |
| G23698 | fem1b | other | downstream | 1544378 | 18207078 ~ 18208308 (+) |
| AMCG00007414 | NA | other | downstream | 1555030 | 18217730 ~ 18224936 (+) |
| G23724 | NA | other | downstream | 1627408 | 18290108 ~ 18292338 (+) |
| AMCG00007433 | NA | other | downstream | 1904542 | 18567242 ~ 18570472 (+) |
