Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007382 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 16791635 ~ 16799244 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042416 | dopamine biosynthetic process | biological_process |
| GO:0042136 | neurotransmitter biosynthetic process | biological_process |
| GO:0009072 | aromatic amino acid family metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0004511 | tyrosine 3-monooxygenase activity | molecular_function |
| id | description |
|---|---|
| K00501 | TH; tyrosine 3-monooxygenase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007382 | True | 1326 | mRNA | 0.53 | 11 | 16791635 | 16799244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007381 | NA | coding | upstream | 26007 | 16761717 ~ 16765628 (+) |
| AMCG00007378 | NA | coding | upstream | 82339 | 16697272 ~ 16709296 (+) |
| AMCG00007377 | NA | coding | upstream | 99416 | 16683676 ~ 16692219 (+) |
| AMCG00007372 | NA | coding | upstream | 410419 | 16347511 ~ 16381216 (+) |
| AMCG00007371 | nap1l4,LOC100702699,LOC106905261,LOC108237555,LOC106959919,LOC103466161 | coding | upstream | 488517 | 16301868 ~ 16303118 (+) |
| AMCG00007383 | LOC108275360,LOC105008177 | coding | downstream | 9020 | 16808264 ~ 16836323 (+) |
| AMCG00007385 | NA | coding | downstream | 193799 | 16993043 ~ 17033247 (+) |
| AMCG00007391 | NA | coding | downstream | 483316 | 17282560 ~ 17286192 (+) |
| AMCG00007390 | NA | coding | downstream | 505277 | 17304521 ~ 17310566 (+) |
| AMCG00007394 | NA | coding | downstream | 588699 | 17387943 ~ 17411368 (+) |
| G23322 | NA | non-coding | upstream | 380424 | 16356690 ~ 16411211 (+) |
| G23294 | NA | non-coding | upstream | 495627 | 16293104 ~ 16296008 (+) |
| G23263 | NA | non-coding | upstream | 634288 | 16152460 ~ 16157347 (+) |
| G23189 | NA | non-coding | upstream | 724553 | 16030764 ~ 16067082 (+) |
| G23154 | mob2,LOC108411394 | non-coding | upstream | 1037875 | 15669942 ~ 15753760 (+) |
| G23432 | NA | non-coding | downstream | 168618 | 16967862 ~ 16968068 (+) |
| G23433 | igf2b,igf2,LOC105904486 | non-coding | downstream | 170561 | 16969805 ~ 16973419 (+) |
| G23449 | NA | non-coding | downstream | 248686 | 17047930 ~ 17048318 (+) |
| G23497 | NA | non-coding | downstream | 553328 | 17352572 ~ 17352790 (+) |
| G23515 | NA | non-coding | downstream | 675719 | 17474963 ~ 17479749 (+) |
| AMCG00007379 | NA | other | upstream | 128935 | 16624390 ~ 16662700 (+) |
| AMCG00007350 | tsg101 | other | upstream | 1411670 | 15366661 ~ 15379965 (+) |
| AMCG00007352 | NA | other | upstream | 1503675 | 15276711 ~ 15287960 (+) |
| AMCG00007337 | NA | other | upstream | 2301943 | 14478673 ~ 14489692 (+) |
| AMCG00007307 | clg19h11orf96 | other | upstream | 6178531 | 10611196 ~ 10613104 (+) |
| AMCG00007417 | NA | other | downstream | 1399374 | 18198618 ~ 18201960 (+) |
| G23698 | fem1b | other | downstream | 1407834 | 18207078 ~ 18208308 (+) |
| AMCG00007414 | NA | other | downstream | 1418486 | 18217730 ~ 18224936 (+) |
| G23724 | NA | other | downstream | 1490864 | 18290108 ~ 18292338 (+) |
| AMCG00007433 | NA | other | downstream | 1767998 | 18567242 ~ 18570472 (+) |
