AMCG00007411


Basic Information

Item Value
gene id AMCG00007411
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17962721 ~ 17978522 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007411
GTGCTGCAGTTCCCAGCGCTGCCTGCAGAGCTGCAGGATCAGAGACAGTTGGCCTATGGCTGGCAGGAGCTCTGTGCCCTGATCCCTGGCTGCTCATCCCTGTGCTCTCGGGGGACGGCTGAGGCCGGCAGAATGCCAACAGTGGACTGTGGGCCGCCAGCGACTCTCATTGTCAACTGCATCCGAGGCGGCGTGTGCAGAGTGCGGGCGGCCGCTCTGGGCGGGACGCATCCCCAGGACAGGGAGGCGAATAAAACGCACCGTGCCGCCGGGGAGACGGCCACTGCAGCGGGACACACCGGCACCGGCACCGGGAGAGCACTGCTGCAGCCCGAGCCGCTGCCACGCCGCATCCGCGCACAGCTGCCCTTAGTTCCTGGTGGAGAGGGACtgggagcaggagagagggagcataggAGCCCACTGCAGGAGAAGAGACGTGCGAGGGGCTGCCTGTGGACTGACTGGCAAGTGGAGAGGGGCTGCCTGCGGGCTGACTGGCAGTGTGGGCAGTGCTGGGGTGTGAAGGGACGGGTAAAGGAGCTGTGCCGGATGACGCTGGAAGCCGAGAGCAGAGAGCAGGGCGGGACCCGCAGGAATCCTCCCAGGATTaaccctgtctccctctctgctcctctgtctctctgcctgtctctcaccctctcctctcctctctcgctCCTGTCCACCATGCTGAGTGTGAAGCTTCCTCGTGTCTTCAGCATCAACCAGGTGCCCAAAGTGTTCCATGAGGATGGCATCATCTCGGGTTACCGGCACCCCTGCAGCTCTGCCACAGACTGCCTGCTCAGTGTCTTCCAGCTGACCAATGAAACGCTCAACATCTGGACCCACTTCTTGCCCACCTGGTATTTCCTGTGGAAGCTGCTGGGCGTGCTGTACATGCAGGATGTGTGGGCCGACTGCTACTCCTGGCCCCTGCTGGTGTTCCTGCTGTCCTGCTGCATGTACCCACTGGCCTCCAGCTGCGCCCATACCTTCAGCACCATGTCCGTCCGGGCACGCCACGTCTGCTTCTTCTTCGACTATGGTGCTCTGAGTTTGTACAGCCTAGGTTCAGCCATCACCTATTCAGCCTATGTCATCCCAGACCGATGGGTGAACAGCAGCTTCCACCACTACTATGTGCCAGTGGCTGTGCTTAACACTGTCATCTGCACCGCCCTGGCCTGCTACTCCCGGTTTCCAGAGGGTAAGAGGCCAAGGCTGGCGAAGATCTTCGTGTGCGCGGGAGTCGGCTGCACAGACAATGCGAGCAACATGCTACACTACCAACATGTTTCCCTCGCCTTCCTCACCTGCTTCCTGTTTGCCATGCACCTCCCAGAGCGCCTGGCCCCTGGCTGCTTTGACTACATCGGTCACAGCCACCAGCTGTTCCATGTGTGCGCGATCTTCAGCACGAACGTCCAAATGGAGTCCATCATCCTGGACATGGAACTGCGCCGGGAGTGGCTGCTGGCACACGGCCCCCCCGTGACCTTCGGCAGCTCTGTGGGGCCGGCGCTGCTCTGTGTGGCTCTCAGCCTCTGCATCATCTATGCCTTCAGCCAGGCACTATACTGGGTGCCCACCACCACTGCTGTCAACAAGAGGCACAAGCGCAGCTGGAGGCCCCGGTCAGCATCAAGGGCTTCCACCAAATAACTGCAGTCTGGGAATGGCTCCTCCTCTGCCGCTCCGGCTGAAAACTGCAGTCTGTGTTCGGCCTCGTGGGAGGGGGCTCCTACTCTgaagctgtgtctgtgtgtctccagTGGTCTGTGCGTttctgtgtctgagtgtgtctttgtgtctgtgtgtctgtgtttctgtgtgtgtctgaatgtgtctgttgtgtgtctgtgcatatCTACgcatttctgtgcttttgctCTACGTGGGACACCCTATCACAGGGAATGAAAGGAAGGGATTGGCTCACTGACATTGCCCCAGAGAGCCGCTGCTCTGTGGGCCAGCGCCAGGCAGCGTAGTGCTCCCTCGACCTGGCATTGTGTTTGGATGCtccttttaattgtattgtcaCACTCATGAGCTGGGATGCTTGAAGGGAGGGGCTGACCTTTCTCAGTCTCAGTCCGGTGAATGTTATTTGCACACCTTCTGTGATATTTTGCACGTTTTGTGGGACTGGAAGGGAAGCAT

Function

GO: NA

KEGG:

id description
K25041 PAQR5, MPRG; membrane progestin receptor gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007411 True 2169 mRNA 0.59 10 17962721 17978522

Neighbor

gene id symbol gene type direction distance location
AMCG00007406 kif23,LOC107686310 coding downstream 4659 17943771 ~ 17958062 (-)
AMCG00007405 NA coding downstream 113997 17823894 ~ 17848724 (-)
AMCG00007401 NA coding downstream 313949 17592301 ~ 17648772 (-)
AMCG00007399 NA coding downstream 432122 17521789 ~ 17530599 (-)
AMCG00007392 kmt5b,LOC102794872 coding downstream 591465 17353112 ~ 17371256 (-)
AMCG00007409 LOC105906560,LOC106562708,LOC106562601 coding upstream 1720 17980242 ~ 17991860 (-)
AMCG00007412 LOC107100407 coding upstream 60313 18038835 ~ 18048218 (-)
AMCG00007410 coro2b,LOC105906559,LOC106562700 coding upstream 86904 18065426 ~ 18077532 (-)
AMCG00007413 NA coding upstream 135253 18113775 ~ 18115759 (-)
AMCG00007419 pias1,LOC103372741,LOC103141277,LOC103466533,LOC106521199,LOC108229849 coding upstream 245809 18224331 ~ 18237308 (-)
G23629 NA non-coding downstream 56313 17906101 ~ 17906408 (-)
G23624 NA non-coding downstream 139403 17821767 ~ 17823318 (-)
G23620 NA non-coding downstream 187875 17774551 ~ 17774846 (-)
G23580 NA non-coding downstream 304163 17658352 ~ 17658558 (-)
G23566 NA non-coding downstream 379281 17581606 ~ 17583440 (-)
G23676 NA non-coding upstream 93533 18072055 ~ 18074005 (-)
G23745 NA non-coding upstream 335629 18314151 ~ 18403277 (-)
G23799 NA non-coding upstream 640763 18619285 ~ 18620731 (-)
G23813 NA non-coding upstream 733555 18712077 ~ 18714368 (-)
G23839 NA non-coding upstream 799323 18777845 ~ 18778069 (-)
AMCG00007375 NA other downstream 1340816 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 1617141 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 1648689 16237461 ~ 16314032 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 3929509 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 4016656 13945643 ~ 13946065 (-)
G23661 NA other upstream 76948 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 223937 18202459 ~ 18208020 (-)
G23838 NA other upstream 797838 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 1813179 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 1936624 19915146 ~ 19923153 (-)

Expression


Co-expression Network