AMCG00007422


Basic Information

Item Value
gene id AMCG00007422
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18290092 ~ 18294570 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007422
ATGGTCCAAAACAACACGGCGCTGCCTGCCCCTCTGTCCGGCCTGTATGCAGTGATGGATCGTTGCTCAGGCACTGTTCACAGCCACAGTGAACACCAAAACGCCCGACGCTTCTATCTCTCCGTCTCTGCAGGGCCGTCGGCTGGCAGAATTGCAGCCCGTATTTTCTGCTTGTTCGTGTGCCTGGTTTTAAGTGCTGGCCACCTGTCTGTGCTGATAGAGAGCGATACTGCTGCTGTGCTGACCCTGCAAAGTGTCCCCATGGCGCTGCTCCCTCGGCGCTGTCAGCCAGGCCATGCGTTCGTGCTGCTGTACAACGATGGCAACGCTGAGGTGGTGTCCATGTGGGTGTGCCGGAGCCTGGAGGAGAGACgggcacagcagcagcaggggggCGGGCTGCAGTGAGGTGTCccgagagaggagagaaggagaggccCTACTCTCCCTGCAGACTGAGGATCACAAGGACTGGCAGcacccacacaacacacacacacagggctggcactgccccccacccccacgcaGACTGGACATTTGCCCTCCCTGTGTCCGGCCTGTAGCCACTGAGTGCATGAGGACCCTGCTGCTCAACTTGCACACAGACTGACGGGCCGATGGGGGTGGCGTCCCAAAACAGTGCCATCCAGGAGAGGGGGAAAAGAAGGAGGGGAAGGGGTATACTGTGTTCAGTATACTCCCAACCTCCCCCTCGCCCCCCCTGCTCCTTTTGGTCCTGGCACATTTCCCCACGTCATCTTCAGATGGGCACCGCTTCCTCTAGCAAGGCATCCGAGCATTAGGTCCAGGTCCAGCTGCAAAGCCCagccttcctcctcctcctcttcctcctcagccTCCTCCCGGGACGCAGCGTGGGCCGGGCCTGGACACTCGGTGTTTAAACAGAGAAACGGAGCTGGCCAGAGCCCCCATGAATGAGAGCCCCCAGGACAAGGACGCTGCCCAGACTGTGTACACTCCTCATGCAATAGCACAGACAGAGGGGACCTGGGGGGGTTATTCACTGTCTGTTACCTGTAATGACCTTTCCAGCAGGGGGTCtcagttttttgtattgttgttttttgttttgggtttttctgttttttctctgaaGATGTGCTCTCCCCAGCTCTCTCCAGGAGGCCGCTACTCTCCGCCCCAGGGCCGCGGTCTCACGCAGGCAGATATGAAacccttttctttatttgtaaagAGGGTGAATTTCTCTCGTCCTCCGCACGTGGGACGAGGGGCTGCGACATTGGCGCTGTATCCTGCCCTGTACAGTAACAGACTGTTTCCTCTCAGGCCCAGCTGCAGTCCCCTCGCCCCCTGTGTGTGTAAGCCAGGTATTATCCGTTCGCTGTACATGGTATTCAGCACAGTGCTTTGAGACACAGCTGGACCAAAAGTCACGCTGACGCTGCATGTGTGAATCAGCACCTGACCTTTCCCATGATCCTCTGGGTAGCTGCTCTTCCTCATCCTCAGGCTGCTGTTCAGGAAATCTCCACCAGTGCTCAGGCTGCTGCTTCTGTGTCCCACTCGGCAGAGAGAGCAGAACCACCCCCCTGCTTCCTCCTGTGTCCCCCTAGTGTCCCCCAGCTCCGTGATGAGTTTGAATCATAAATGAAAAGTCTGTTTATAAGTACAGACAAAATACGCACTGCCTGAAGCTGAACTGTGGGGGTCAGCCCTTACAAACGCTTACAGTAGTGTAACCAGGGTAAACCGCAAGCTTAGTACAGGAAGCCAAGGTGTACACAAAGCAGGCAGAGCTATAGcaaagtatagtatagtatctCGTGAAAAGCACCACAGACCAGAGTGGAGTGACAGAGGATCATGGTCTGACGGCCGCAGTGCTGTGCTGGTGATTTGTGGTCTGACTTCGGCGAGGGAGGGTGCTCTGCAGCTCGGCATTTTCCCAGAGGGATCTCTTCGCTCCGGGTTGCTCTGCTGGGGCCTGCTGTCTGTATTATGGGTCTCAACATGTTAaaactgtgtatgtatttttataactttgtgtcaatgtgtgtttgtctgtctgaaaCCGTTCTCTGCCGTTCTTACCAAGGTGGGGCCTGAGCCGGGCCCCTGGGCCTGTGTGTTAGGAGAGGTGTGCAGTTTGAACACACGCAGGCTGGTGCACAGGGGAGCTGACTGCTGAACTAGCATGTCTGAGGCCTTCAGCCCCAGCTCGGCCCCTGTGGTGTCTCGCAGCAGGGTCACATTCTGGCTCCCTGTGTGTTTGCAGCCCTGTCCCTCTGACCGCCTGGCCCGTGTCCCAGCTGAGCAGGGCTGTACCCGGGCCCGTCCAGAGCTGGCCACTGAGCTCCAGAGACGCTGGGCTTCCGCAGGCCTGGCTGTGACTCAAGTGCCCAGTTTGTAGGTGTTGCTCGCAAACGTGCCATCGGAGACTATAAAACACATCTGTAGCCCTTGCTGTAAGTACcattataaacatgtatttggaAGATATATAAAGTGTGCAATatgatacagaaaaataaaaagaatgtgaaaataccctaaaaataaataaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007422 True 2557 mRNA 0.55 2 18290092 18294570

Neighbor

gene id symbol gene type direction distance location
AMCG00007420 NA coding downstream 14841 18265414 ~ 18275251 (-)
AMCG00007419 pias1,LOC103372741,LOC103141277,LOC103466533,LOC106521199,LOC108229849 coding downstream 52784 18224331 ~ 18237308 (-)
AMCG00007413 NA coding downstream 174333 18113775 ~ 18115759 (-)
AMCG00007410 coro2b,LOC105906559,LOC106562700 coding downstream 212560 18065426 ~ 18077532 (-)
AMCG00007412 LOC107100407 coding downstream 241874 18038835 ~ 18048218 (-)
AMCG00007427 NA coding upstream 6285 18300855 ~ 18304318 (-)
AMCG00007426 NA coding upstream 12307 18306877 ~ 18310368 (-)
AMCG00007424 NA coding upstream 25398 18319968 ~ 18329876 (-)
AMCG00007425 NA coding upstream 48453 18343023 ~ 18346193 (-)
AMCG00007423 NA coding upstream 53584 18348154 ~ 18352726 (-)
G23676 NA non-coding downstream 216087 18072055 ~ 18074005 (-)
G23663 NA non-coding downstream 227100 17972906 ~ 18062992 (-)
G23629 NA non-coding downstream 383684 17906101 ~ 17906408 (-)
G23624 NA non-coding downstream 466774 17821767 ~ 17823318 (-)
G23620 NA non-coding downstream 515246 17774551 ~ 17774846 (-)
G23745 NA non-coding upstream 19581 18314151 ~ 18403277 (-)
G23799 NA non-coding upstream 324715 18619285 ~ 18620731 (-)
G23813 NA non-coding upstream 417507 18712077 ~ 18714368 (-)
G23839 NA non-coding upstream 483275 18777845 ~ 18778069 (-)
G23840 NA non-coding upstream 484601 18779171 ~ 18779608 (-)
AMCG00007418 fem1b other downstream 82072 18202459 ~ 18208020 (-)
G23661 NA other downstream 231143 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 1668187 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 1944512 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 1976060 16237461 ~ 16314032 (-)
G23838 NA other upstream 481790 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 1497131 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 1620576 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 1876759 20171329 ~ 20222004 (-)
G24217 NA other upstream 2036943 20331513 ~ 20331811 (-)

Expression


Co-expression Network