AMCG00007444


Basic Information

Item Value
gene id AMCG00007444
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18690011 ~ 18712246 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007444
ATGTCTGTAAGTGTGTCTCTGAGTgcctctgtgtgtccctgtgccgCAGGCTGTGAGAGTGACCACTGGGGGCCCCACTGCAGTAACCGCTGCCAGTGTCAGAACAACGCGCTGTGCAACCCCATCACTGGCGCCTGCGTCTGCAACGACGGCTACCAGGGCTGGCGCTGCGAGGAGATCTGCCCTGCCGGCTACTACGGCAAGGCCTGCCAGCTGCACTGCCAGTGCCAGAATGGTGCCACCTGTGACCACAAGACCGGCGAGTGCCACTGTGCCCCAGGATACACTGGAGCCTTCTGTGAGGAGCGGTGCCCCCCTGGCAGCCACGGTGCCCAGTGCGAACTCCGATGCCCCTGTCAGAACGGAGGAGTGTGTCACCACGTGTCCGGAGAGTGCTCCTGTCCAGCTGGCTGGATGggctCAGTGTGTGCCCAGCCATGCCAATCAGGGAAGTTTGGCATCAACTGCAGCCAGGACTGTCCCTGCCATAACGGTGGGCTGTGTGACCATGTGAGCGGGCAGTGCCAGTGCACGGCGGGCTACACAGGGGAAAGGTGTCAGGAGGAGTGCCCGGTGGGCAGCTATGGCCTGCAGTGTGCCTTGAAGTGCGACTGCCAGAACGGTGCCAAGTGCTACCACATCAATGGGGCGTGCATGTGCGAGCCCGGGTTCAAGGGTGCACACTGTCAGCAGAGAATGTGCCCAAAGGGGCTGTACGGGCTCACCTGCGAAAGGTACTGCCCATGCAACTCCTCCAACACCCTCAGCTGTCACCCACTCTCCGGTGAGTGCACGTGTGCAGCAGGCTGGGCGGGGCTGTACTGTAATGAGACCTGCCCCCCTGGCTTCCATGGTGAGAGCTGTCAGCAGTTGTGTGCCTGCGCCAACGGAGCGGACTGCCACAGCATCACCGGTGCCTGCGTGTGTGCACCCGGCTTCACGGGTGATGACTGCTCCCTGCCCTGTCCGACCGGCTCCTATGGAGGCTGGCAGGGAGTGGACTGCTCTATCCTGTGCTCTAGCGGATCCTGGGGCCTGGGCTGTAACCAGTCCTGTGTCTGTGCCAACGGAGCTGCCTGCAATCCCATGGACGGCTCCTGCACCTGCTCCCCGGGCTGGAGAGGGGGCAGCTGTGAGCAGCCCTGCCCCgATGGGACATACGGGCTTGACTGTCGGGAGCGCTGTGACTGCAGCCACGCAGACGGCTGCGACCCCGTGACCGGCTACTGTCGCTGCCTCGCCGGCTGGACAGGAATCCACTGTGACAACGTCTGCATCCAGGGCCGCTGGGGGCCCAACTGCTCCGTCTCCTGCAACTGTGACAACGGCGGCTCCTGCTCCCCGGAGGACGGCACCTGCGAGTGCGCACCTGtcTGTTCCCCAGGGTTCTATGGTCACCACTGCAGTCAGGCGTGCCCACAGTGTGTGCACAGCACCGGGCCATGCCACCACATCACCGGCCACTGTGAGTGCCTGCCCGGCTTCTTCGGCTCTCTGTGCAACCAAGGCAAGTTGTGCGCCAGTGGCCGGTTTGGGAAAAGCTGCGCAGAGGTGTGCTCCTGTACCAACAACGGCACCTGCAACCCCATCGACGGCTCCTGCCAGTGCTTCCCCGGCTGGATCAGCAATGACTGCTCCCAGGCCTGCCCCCCCGGCTACTGGGGGCCCGACTGCATCCACACCTGCAACTGCCACAACGGAGCCCAGTGCAGCACCTACGACGGAGAGTGCAAGTGCAGCCCTGGCTGGACCGGCCTCTACTGCACCCAGCGCTGTCCCACTGGGTTTTTTGGTCGGGACTGTGCAGAAGTGTGCCGCTGTCAGAACGGGGCTGACTGTGACCACATCGGCGGCCAGTGTGCCTGCCGCACCGGGTTCGTGGGCCCCTACTGTGAGCAGAAGTGTCCTGCCGGGACGTTTGGCTACGGGTGCAAGCAGCTGTGCGAGTGCATGAACAACGCCACCTGTGACCATGTGACCGGGACCTGCTACTGCAGCCCTGGGTACAAGGGCATCCGCTGCGACCAGGcggCACTGATGATGGAGGAGCTGAACCCCTACACTAAGATCAGCCCAGCGTTGGCGTCGGAGCGGCACTCCGTGGGCGCGGTGGTGGGCATCATCGTCCTGCTGCTCATCGTCATGGCGCTGCTCGGCCTGTTTGCCTGGTACCGCCAGCGGCAGAAGGAGAAGGGCCACGACATGCCCAGCGTCTCCTACACACCAGCCCTGCGCATCACCAGCACAGACTACTCCCTCTCCGACACCTCTCAGAGCAGTGGCAGCGGCCATTGTTTCTCCAACCCCAGCTACCATACTCTGGCGCAGTGTGGCGCCCCCTCGCTTTCTCCCAACGACCTGGATGCCAGCTCGTCCGCCACGCTGAAGAACAAGAAAGGGGTCAGAGAGAGTGTCGACTGGAGGCCGTACTGCAATCTCAATGACTTAGGTGCCTGTGGGCTGGACAGACGCCACAACACTTACATTGTAGAGCAGTGTTTCAAAGACTACATGAAGGGCTCGGTGGGCAGCTCCAGCACCTGCTCCCTGAACAGCAGCGAGAACCCCTACGCCACCATCACGGACCCCCCCGGCACAGCCTGCAAGCACTCCGAGAGCAGCTACGTGGAGATGAAGTCTCCCGCCCACCGCGACCTGGCCTACTGCaccgccacccccacccccaagaaCGTCTACGAAGTGGagccCACTGTGAGTCTGCTGCAGGGTGCCAACGGAGTGCTGCCCAGCTACCCTCAGAACCCCTACGACCTGCCCCGCAACAGCCACATCCCCAGCCACTACGACCTGCTGCCCGTCCGCCACAGCCCTGCCCACTCCCCGCCACCCGAGGACGCCCCGCCCGGCACCCAGTCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007444 True 2880 mRNA 0.64 20 18690011 18712246

Neighbor

gene id symbol gene type direction distance location
AMCG00007439 megf11,LOC104967286 coding upstream 16869 18655566 ~ 18673142 (+)
AMCG00007440 NA coding upstream 66968 18621872 ~ 18623043 (+)
AMCG00007436 tipin coding upstream 68167 18619308 ~ 18621844 (+)
AMCG00007438 rl4a,rpl4,LOC106561854 coding upstream 93658 18590680 ~ 18596353 (+)
AMCG00007437 lctl,LOC105892386,LOC102794608 coding upstream 105735 18575842 ~ 18584276 (+)
AMCG00007446 LOC101468289,LOC102208128,LOC106924056 coding downstream 38224 18750470 ~ 18790088 (+)
AMCG00007447 vwa9,LOC107583765 coding downstream 98609 18810855 ~ 18814928 (+)
AMCG00007450 NA coding downstream 163309 18875555 ~ 18896629 (+)
AMCG00007451 LOC107755062,LOC107700450 coding downstream 227019 18939265 ~ 18972204 (+)
AMCG00007453 NA coding downstream 319838 19032084 ~ 19047759 (+)
G23791 NA non-coding upstream 64952 18623921 ~ 18625059 (+)
G23782 NA non-coding upstream 100943 18588866 ~ 18589068 (+)
G23781 NA non-coding upstream 101321 18588016 ~ 18588690 (+)
G23780 NA non-coding upstream 103475 18586174 ~ 18586536 (+)
G23696 NA non-coding upstream 485650 18202462 ~ 18204361 (+)
G23804 NA non-coding downstream 2425 18714671 ~ 18719794 (+)
G23887 NA non-coding downstream 292101 19004347 ~ 19087472 (+)
G23891 casc4 non-coding downstream 335840 19048086 ~ 19112325 (+)
G23886 NA non-coding downstream 367836 19080082 ~ 19083613 (+)
G24030 NA non-coding downstream 917058 19629304 ~ 19630607 (+)
AMCG00007433 NA other upstream 119539 18567242 ~ 18570472 (+)
G23724 NA other upstream 397673 18290108 ~ 18292338 (+)
AMCG00007414 NA other upstream 465075 18217730 ~ 18224936 (+)
G23698 fem1b other upstream 481703 18207078 ~ 18208308 (+)
AMCG00007417 NA other upstream 488051 18198618 ~ 18201960 (+)
AMCG00007452 NA other downstream 295304 19007550 ~ 19014899 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other downstream 338731 19050977 ~ 19056133 (+)
AMCG00007483 NA other downstream 1226924 19939170 ~ 19951428 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 2347913 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 3419327 22131573 ~ 22134714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_04673313_04707104 MEGF11 coding CI01000013 null 4673216 ~ 4707470 (+)