AMCG00007456


Basic Information

Item Value
gene id AMCG00007456
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19058257 ~ 19074146 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007456
ATGAGCCACAACATAAGCTGGACATTTGGTGATTTTCTCCTGGACATCTTCCTGTCTGCTGAGCCCCTTCCATGCACCTCTTTGACCCCAGAGTGTCAGACTGCACAGTTGACACACTCGCTGGTGCCCCCTGCCCCAGTGCTGACAAAAAGCTGCGATCAGTATAACTTCACCCTCCTAAGCAGCACTCTCTGCTCCCCCCTGGTGTTGCAGGGGACCACATCCTCCTCTATACTCTCCTGGTTTTGCAAGGCTCTGGGAGGCTTGAGTCCCTCTGAGGAAGCACTTGTGTGGAACAATGGCTGCAACAATATGCAAAAGATGGTGTCAGTCCTCCAGGGTGATGCTGCCTGCCAGGCTCCCTCGCGCATCTCCAGGGCTGCCTCGAGTCTGAATGATCTCGTATGCTTTTACACCAGCTGGACTGAGTCTGTCTATGTGGACCCGGCCGTGGTGTCCTTCTGCAGTGAGAACGACAGTGACAATTTCCTCCAGGACGTATGCTACAATGCCAAGCTTCTGCCCCTGCTGTTGGAGAACCCAGATAATGGCTGGCTGTCCTCCTACTGTGCCAACTCTTCCAGCATAGACACAGTGTCTCTGTACTGCCAGTATTCCACTTGGGTGCCCGAGGAAGTGGACCCCTCTGTGGTGGGCCTGTGCTGGGACAATGACCCGGTGGGGCTGCAGGAGGTTCTCTGCAATGATCTGGAACTCTTCCACCTGATCCTGGGCAACCCCGCCAACATGTGGCTGTCCTTAAACTGCACACCAGTCGAGCCACCTACTGATCTGACTCTTATGGAGCACGTGAAGCAGTGGTGCAGCTACTCCAAGTGGCTGGACCCTGCCCAGGTGGACATGTCCACGCTCTCCATCTGTATGCAGTATGACGCTGAGAACTTTGCGAAGGCAGTCTGTGGGAATGCCACCATGCTTGCTGTCCTGCTGCAGAGCGAGATTAACTCCTGGATCCAGACCTTCTGTGCCAGCTCCATCAGCGCACCCAGCTCCACCACTGCTCCCAGCTCCACCACTGCTCCCAGCTCCACCAGAGCACCCAGCTCCACCCGTGCTCCCAGCTCCACCCGTGCTCCCAGCTCCACCAGCACTGCTAGCACCAGCGGCTTCAGCTCCACAGTCTGGTGCCGATATGAAGAGTGGCTTCAGGCCTCCGTTGACCCCTCAGTGGTGGCGTTGTGCTGGCAGCATGACCAACTGGGCTTCAGTAAGAACGTGTGCTGCAGCCTGGCATTGTTTGAGAAGCTCACGGAGAACCAGCAGAATGTGTGGCTGCTGTCAGAGTGCCAGGGCAACGAGACTAGTGAGGCTGTGGCCCTGACATGCCGCTACGGGGAGTGGAGCCGCCCGGTGCTGGTGGACATGACTGAACTGGCCCTGTGTGCCGAGTACGACCAGGACAACTTCACACGGCTGGTCTGCGCAAACCAGACGGTGTTGCACAACCTGCTGGCCAACCTGGACAACACCTGGCTGCTGGGGTTCTGCGCCAATTACTCGGGCTCGGGCCGGGACGCCTTGTTTGATCCAGCAGAGCACTGCCACTACCAGACCTGGACTGTGCAGCTCCCAGACCCGTCCCTGTTGGCCCTGTGCTGGGACTTCAACCAGGCAGCATTTGTGCTGGCAGTGTGCAAGAACTCACTGCTGCTTTCCCTACTGAACCAGGAGCCTTCTGCCATCTGGGTTGGCACCCTCTGCTCCACTTACATCAACAATAGCAACTCCGCCAACAACTACACTGAGCCCACTCCACCGTGCACCGTGAGAGACCTGGTGAGAAGGCTGAACTGGAGCTGCAGTGTTGACTTCAGCAGTGCCTGCCAGCAGAGCTCCCCCCAGCTGCTGGGCCTGCAATTGCTGCTGCGCTGTGGGTTGGAGGTGCTGGGGCTCCGCATGGACAGCATCATTACTGACCGTGTCTCTGCAGCCTTCAAGCAGGCGGCCAACAATGTGGTGATTGCCCTGGTGGCCGTGGAGGAAAGCCAGTTGCTCCCCCTGCGCACGATTGAGCACATCCGCCTGAGCATACTGGGCTCCGTCATGGCATACCTGGAGCAAGAGGAGAACTTTGCAAACAAGAGGGAGCTGCTGCAGTGCTTTGGGAAGGTGCTGACCAGCATGATGCAGACGGGGAGGGTGGTGAATCAAGATGGCTTCTTCCTCATCAAGCTCGGGGAGGACTACCTGAGGACCATGGTGTCAGTGTTTTTGCAGAAGCAGGTCTGGGAGGACATCACCCTCTTGGCAGAGTTGGCTCCAGTGCTTCAGTACTCCACTCCCGCGGACATCCTGAGTCTGCCTCCTGTACAGGGCAATGCTACCGTGTTGAAGATGATCATTGGCCAACTTACCACGCTGTCTGAGGATCAGCGCAAAGCATTCGGTCAGTGGTTTGGCAGCGGCTTCGCTGACCTCTCCTCCGGGCCACTGTCTATGGTCCAGGACGCTGCCAACCTGATTGTCTATGTCCCCTTCAGCAAATTCCAGAGTCTCTCACCTGCCCAGATGTTGCAAGGCCTGGAACTGCTCCTGAACAGCACTGTGACCCTCCTGCAGAGGCAGCACCTGGCCCAGAGCATCCTGCGGGCATACAGGAACCTGACGTCCTCTGACTTCAGAAAGCTGGGCATTGCGACCTGCCTGGCGAGCACCACAGACCTGCTGGTGTACAGGCAGCGAGAGCCCTGGACTAAGATACTGGACAATGTGAAGGAGTGTCTGAGACAGGGGCTGCCCGTGCCCAGCGAGATGatcTCAGGGCTGTTCTACAGTGCTCCGCTGATGGATGCAGCGTCTCTCAGTGCCCAGAATCTGTCGGAGCTGGCGCCTCTGCTGCCCTGGCTGGGGCTGCCCTTCCTACGCCAGCTCACCCCGGAGCAGCTACAGGCCACGCTTCCTGCTCTGCAACGCATCCCCTTCACACCTGCACAGTTAATGCTGCCAGAGCAGCTGTCTGCGCTGGGGTGGCTGGTGAGTGGTGTGAGGGTAGAGACTCTTCGCTCTCTGCCCAGTGACACCCTCCTTGCTGCCCTGCCCAACGTGTCCAACCACCGTAGCCACCTCGGCCCAGCCCAGGTCAACATCATAGCCACCAAGCTCTGGGCCAAGTTGCTCTTTAAAGAGGCTCTGAGGACACAGAACATCACCGCAGAGGGGCTGAAagcACTAGGGATGATAGCCCAGGGAGCagactgtgtgtctctgagaTGCCTCTTGATGGGCCAGAACTCCTCCTCAGTCCGTTCCATCGTGGTCTTCTTCAGAGACCTCCCCGCCAACCTCCACACCTCATTGAAAGAGTGCGTCATTGATGAGCTATACAACTTCAACTTCTTCAGAGAGGTGCTGGGGGAGCTGGGGGCTCAGATCGCACTGGAATTCTCGAGTATAGTGGCAGTGGCAGGGAGTGCTGTGTGTATCAGGGCTGCGCAGTTCTGGCAGACCTCTGTGCGGACACTGCGACTGACTGTCCTCTTTCAGGGCATGCAAACCGGGGAGTTCTCCGGGGCAGAGTTCCATTCCCTGGGCGCCATGTCGACGTTTGTGTCGGATGAGATCTTTGTGCAGATCAGCCGGCCATTCCTGGTGGAGAACATCGAGTATGTCAGGAGATTCTGCTTCGGCAAGAGCAAGAGGGAGCTCGTTGGGAGGATCCTGCAGGACCCACTCACTTTCGGGATGGGCGCCTCAGAGCGCAAGGAGATCTTCCAGAGCCAACAGTTCCTGCTACAGCTCTTCCTGGGTTTCCTGAAAACAGGGAAGCTCTCCCAAGCGTACGCCTTTGCTAGCTGCCTGGAGCTGATTGGCCAGGACCCCTTCTTCACACCCTATGAGCTCTCGCTGCTCCTCAACAGGGTCAAACAGATCAGTGGCTCTGCTTCCTCCTTCTCCCCGGCCCTCATCGCCCAGCTGGGTCACATGGCCCTCCGGCTGACTCAGGACGAACTGAAGCACCTGTCTCTGACTGAGCTGTCTGCTGTGTTTGCTCTTGGTCGGATCAGCACCTGGAGTCCCATACAGCTGTCCGTGCTGTTTGGGTCTGTGCTCAACTCCACCAAGTTGACACCCACCCAGCTGGACTCAAGCATGCTGGTATCTCTGGGCTACATCATGTGCGGGATCAAGACCTCTGACTTGACAGTGCTGAACCCGATGGAGCTGCCATGTTCAGAGCCACAGCTAGCCTCCATGGTGGGGCTCCTCTCTCACCCCATGGCCTTTGGACCCATCAGCTCCTGGGGCCCCGAGGTCTTCATCGAGATTGGGTCTGTCGCAGCGGGTATCCCTGACATGGCCATGTCGTCTCTGGTGAAGGAGCAGATTGAAGGAATCACCCCGCTGGCCATCTCTCTCATTCCGCCTGACAAGTTTGCTGTGGTATTCAGTCAGGACCAGATTCGTATGTTCTCATACGAGCAGGCGTCTGCGGTGACGGCGGGGCAGCAGGCGGGGCTGAGTGGGGTGCAGCAGACTGcgctgtccatggtgctgacGCCCTGGGAGGACACAATTGTCGACTTCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007456 True 4548 mRNA 0.58 19 19058257 19074146

Neighbor

gene id symbol gene type direction distance location
AMCG00007454 eif3j,LOC107712512 coding downstream 1986 19050072 ~ 19056271 (-)
AMCG00007455 NA coding downstream 32617 19023898 ~ 19025640 (-)
AMCG00007457 NA coding downstream 35165 19020720 ~ 19023092 (-)
AMCG00007448 NA coding downstream 234651 18815851 ~ 18823606 (-)
AMCG00007449 NA coding downstream 247686 18791578 ~ 18810571 (-)
AMCG00007462 LOC106562148 coding upstream 13056 19087202 ~ 19101380 (-)
AMCG00007461 NA coding upstream 34838 19108984 ~ 19127020 (-)
AMCG00007463 NA coding upstream 63694 19137840 ~ 19140452 (-)
AMCG00007460 sord coding upstream 94668 19168814 ~ 19179046 (-)
AMCG00007459 NA coding upstream 108453 19182599 ~ 19187092 (-)
G23875 NA non-coding downstream 156660 18901365 ~ 18901597 (-)
G23867 NA non-coding downstream 190778 18866767 ~ 18867479 (-)
G23854 NA non-coding downstream 228170 18829865 ~ 18830087 (-)
G23843 NA non-coding downstream 273120 18781214 ~ 18785137 (-)
G23842 NA non-coding downstream 277165 18780837 ~ 18781092 (-)
G23982 NA non-coding upstream 405868 19480014 ~ 19481087 (-)
G24003 NA non-coding upstream 505635 19579781 ~ 19579984 (-)
G24102 NA non-coding upstream 793712 19867858 ~ 19912916 (-)
G24213 NA non-coding upstream 1214377 20288523 ~ 20288842 (-)
G24216 NA non-coding upstream 1256554 20330700 ~ 20330902 (-)
G23838 NA other downstream 280619 18776360 ~ 18777638 (-)
AMCG00007418 fem1b other downstream 850237 18202459 ~ 18208020 (-)
G23661 NA other downstream 999308 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 2436352 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 2712677 16320997 ~ 16345580 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 717555 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 841000 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 1097183 20171329 ~ 20222004 (-)
G24217 NA other upstream 1257367 20331513 ~ 20331811 (-)
AMCG00007500 NA other upstream 1388358 20462504 ~ 20472919 (-)

Expression


Co-expression Network