AMCG00007459


Basic Information

Item Value
gene id AMCG00007459
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19182599 ~ 19187092 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007459
GCACCGAGCCGGGTCTCATGGGGGAAAAGCGAACAATGGGTCCAAATTAGGGTCCAAATTAGGCGCCGGCTCCTCGTCGGTGGAGAAGCGCGCGCTGTTTGAAGTGTCGCGTCACTGGTCACGCCGGCACGCGGCTGGAACGGCTCCCTCGGGCTCGCGCCGAGTCCCAGAACACACCGCGCCCGCCCGCCCGCCGGAAACGGGTCTTTACGGTGAAATAAGTCATTCTTACACAAGCCTCTTTACATTACATGAATTTATGAATACTGGTTCtttttatatgaaattaaattattataagcTACAGGGCTTCATTGGTGGGTTAATTCGAGATCCTGAATTTGTACCAAGAACGGATTAAGCCAATTTAAGACTCCATGAAAGCAAAGGAGGTTCCCGTAATAAAGGCCTTCTCAACCAAATACctgcattgtgtttgtgttccgaGGTGGTTTACGATATCaatctttgttttgaaataataaacattgattAAAGAGGATGTTTCAAAATAAGAAAGCTTGGTTTTCCAGGAGTGTAGGCAGACATGTGTGCGACGTGTGGGTGTCTGAAGGTGGGATTATTACAAACTGTACTGCAGCAGAATACCTTTTCAGTAATGACGCCTCACATCCTGACACCCAGAGGCTATTCAGGAGTATGGACTACTTTGAGGACAGGCTGACAGTTTTTCACTCCTCCTATATCTCTGCCTGTGAGAAATCCAGAACCAAGGGAGCAGTAGCCATCGGGCACTATGTTCTTCCACCAGACTGCGTTCAGGAAGAAGTGAAAGCAGCGGTCGGATGTTTCATTTGGGAGAAGGAAGACCATAATGGCACAAAAGAgGCAGAAAGTGTCAGACGAACCCAAACAAGAGTGCAGACGGATGAAGAATGCCACAGGTTAAATCCGGGCCACTTAAAAATAGACAAGCGTAAAAGCAGACAGGAAGTGTTTGGGAGGAAAAAGGCACCAAGAGATGGTGCATTGTGTTGTTTCGTTCAGCACTATCCAGTGAATAATATGGTTACAGGCTATGTTTCCAGCAGCGAACTGAAGAAGTATTCAGGAGCGCTGCACAGCTTCACTCCTGGACACGCTGGATATTCAGTGTGCAGAGCTGTGTGAAAAGGATACTTGCCCTTCTGTGGATAACAGACGAGACAGATGCATCATCAGCACTCACTGATATCATTGCAGAGTATCTTCAGTTGCCTGGTTCTGTATTTTACTGTGAAAGTGCCATGCAGTCCCGTGTTGTAGTTAGTAAAAAAGAGTTGAGTATGTTCTATATGTTCTGGCACAGCTCTGTAATATAGtaccattttgtttaaaaatgcagcgCTAACAACTCTGGAGTATGCCTTTTTGTGATAAGTCTCAAAACTAAGAAAACCTTACTTCTGCACTGAAAACCTTTTATTCCCAGACTCTATTACTGtaacaaatgcaatacaatctGTTAAGGAAATGCTTGTTCAGTAATAATTACTAAATTATATCAATAGAAGGAAAGTAATATAATTTCACAGTTCTTATTTGGGCTCAGTCTTTGAAGTGTACCTAGGGATGTTCATGGCTATTGAAGTCCTGTTTTGAGTTGGGTATCTTGGGTCTGTCAGTGCTTCATTCCCTTACACATCCCTGggccgtctgtctgtctgtattacAAATATCGGTTGCTTCTGCTTCCTTTACACTTCCAAGTAAAATGAAGTCCAAACCCTGGAGAAGAAATagatagaagaaaaaaacaggattgtcatttttattatcaATGTGCTATTTTGTTGTCAAACTACATTGTATAAGTGGAATTAAAGATGTGTAATAGTGCAGTGATTAAAGATTTCTCCCTGACAGATTTCAGGGTGGTGTCTGGATCTTGTCAGTGATCTGCACAACAGTAATGTACAAGTCCAAAAGCTAGTTTAGTTTCAGAACAATTATGTTTACAGAAAAACATCAGtagtgattaaaaataaagacatacatttaGTCCTATGTGACAGGGAAACATggcataaacattttatttacaattactATTTCAGTAAAGTAACTATTTGGTTTTGCAATcatccaaaataataaaacttacCAAGAGGGGGTGCTGCAATCCAGATCTCTGGCAAATTATTATCTCCATAAATACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007459 True 2161 mRNA 0.42 8 19182599 19187092

Neighbor

gene id symbol gene type direction distance location
AMCG00007460 sord coding downstream 3553 19168814 ~ 19179046 (-)
AMCG00007463 NA coding downstream 42147 19137840 ~ 19140452 (-)
AMCG00007461 NA coding downstream 55579 19108984 ~ 19127020 (-)
AMCG00007462 LOC106562148 coding downstream 81219 19087202 ~ 19101380 (-)
AMCG00007456 NA coding downstream 108453 19058257 ~ 19074146 (-)
AMCG00007470 apba2,LOC108228832,LOC102306122,LOC103462423,LOC106961236 coding upstream 295520 19482612 ~ 19512979 (-)
AMCG00007471 mcee,LOC107750491,LOC107670763,LOC106587249 coding upstream 393326 19580418 ~ 19583227 (-)
AMCG00007475 NA coding upstream 416003 19603095 ~ 19622942 (-)
AMCG00007474 NA coding upstream 456861 19643953 ~ 19652843 (-)
AMCG00007477 NA coding upstream 527101 19714193 ~ 19717796 (-)
G23875 NA non-coding downstream 281002 18901365 ~ 18901597 (-)
G23867 NA non-coding downstream 315120 18866767 ~ 18867479 (-)
G23854 NA non-coding downstream 352512 18829865 ~ 18830087 (-)
G23843 NA non-coding downstream 397462 18781214 ~ 18785137 (-)
G23842 NA non-coding downstream 401507 18780837 ~ 18781092 (-)
G23982 NA non-coding upstream 292922 19480014 ~ 19481087 (-)
G24003 NA non-coding upstream 392689 19579781 ~ 19579984 (-)
G24102 NA non-coding upstream 680766 19867858 ~ 19912916 (-)
G24213 NA non-coding upstream 1101431 20288523 ~ 20288842 (-)
G24216 NA non-coding upstream 1143608 20330700 ~ 20330902 (-)
G23838 NA other downstream 404961 18776360 ~ 18777638 (-)
AMCG00007418 fem1b other downstream 974579 18202459 ~ 18208020 (-)
G23661 NA other downstream 1123650 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 2560694 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 2837019 16320997 ~ 16345580 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 604609 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 728054 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 984237 20171329 ~ 20222004 (-)
G24217 NA other upstream 1144421 20331513 ~ 20331811 (-)
AMCG00007500 NA other upstream 1275412 20462504 ~ 20472919 (-)

Expression


Co-expression Network