AMCG00007464


Basic Information

Item Value
gene id AMCG00007464
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19179795 ~ 19182234 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007464
ATGGACGTGGAAGCGCTGACGCTGGACGCCCTGCGCAGACAGTCAGAGGCGCTGAACCTCAGCCACCGTGAGATCCGGCTGCTGCCGCCCGTGCTCTCGAAGCTGACCCGCTTAAAAAGACTGTTTCTAAACCACAATCGCCTTATTTTACCACCTAACGAGCTTTTGCACTTGGAGCAGCTAGAGGAGTTGGTCCTGGATGAGAACCAGCTGACTGTGTTGCCCAGTGAGATGGGTTGTCTGGGCCACCTGGGCTCTCTGAGTGTGAGCCACAACCCCCTCTCTGTGCTCCCTGCTCAGCTGGGGGAGCTGGCGGAGCTGGGCGAGCTGTGGGCCAACAGCTGCAACCTCATCTCCTTGCCTTCCTCGGTGTGCAAACTCCACAAACTCCGTAAACTCGGAGCGCGCAACAACCACATCACGGCCCTGCCCACCGAGTTCATGCAGCTGGCCAGCCTGCAGTGGTTGAACCTCGCCTGCAATGGGCTGTGGGAACTACCAGAGGGCTTTGGGACACTCCAGACCTTGACTTTCCTGAACTTGGATGGGAACAAATTTGAAGATGTTCCCGAGTCGCTGTCTGACATGCCCAGTCTTCTAGTGCTTCACATGAAGTCCAACTGCATTAGGTCACTGCCAGATGACCGAATCCTGGGATTTACTCAGCTGACTAAACTAGACCTGCGCAGAAACCCACTAACACAAAGACCTGCTCATTGGAAG

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007464 True 723 mRNA 0.56 3 19179795 19182234

Neighbor

gene id symbol gene type direction distance location
AMCG00007458 LOC107712499,LOC106561775 coding upstream 12763 19143133 ~ 19167032 (+)
AMCG00007453 NA coding upstream 132036 19032084 ~ 19047759 (+)
AMCG00007451 LOC107755062,LOC107700450 coding upstream 207591 18939265 ~ 18972204 (+)
AMCG00007450 NA coding upstream 283166 18875555 ~ 18896629 (+)
AMCG00007447 vwa9,LOC107583765 coding upstream 364867 18810855 ~ 18814928 (+)
AMCG00007466 NA coding downstream 8512 19190746 ~ 19194345 (+)
AMCG00007465 NA coding downstream 36556 19218790 ~ 19236741 (+)
AMCG00007467 NA coding downstream 120875 19303109 ~ 19338989 (+)
AMCG00007469 fam189a1 coding downstream 260223 19442457 ~ 19451469 (+)
AMCG00007468 LOC107595092 coding downstream 281322 19463556 ~ 19479089 (+)
G23891 casc4 non-coding upstream 67470 19048086 ~ 19112325 (+)
G23887 NA non-coding upstream 92323 19004347 ~ 19087472 (+)
G23886 NA non-coding upstream 96182 19080082 ~ 19083613 (+)
G23804 NA non-coding upstream 460001 18714671 ~ 18719794 (+)
G23791 NA non-coding upstream 554736 18623921 ~ 18625059 (+)
G24030 NA non-coding downstream 447070 19629304 ~ 19630607 (+)
G24040 NA non-coding downstream 468422 19650656 ~ 19650874 (+)
G24083 NA non-coding downstream 617251 19799485 ~ 19799952 (+)
G24085 NA non-coding downstream 620619 19802853 ~ 19803466 (+)
G24088 NA non-coding downstream 633561 19815795 ~ 19818345 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 123662 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 164896 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 609323 18567242 ~ 18570472 (+)
G23724 NA other upstream 887457 18290108 ~ 18292338 (+)
AMCG00007414 NA other upstream 954859 18217730 ~ 18224936 (+)
AMCG00007483 NA other downstream 756936 19939170 ~ 19951428 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 1877925 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 2949339 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 3007011 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 3081286 22263520 ~ 22266409 (+)

Expression


Co-expression Network