AMCG00007471 (mcee,LOC107750491,LOC107670763,LOC106587249)


Basic Information

Item Value
gene id AMCG00007471
gene name mcee,LOC107750491,LOC107670763,LOC106587249
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19580418 ~ 19583227 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007471
ATGGCGGCCTCCATGTTGAAGGTTGCGGtgGTGCTTTTGTGCTGTGCTTTTATAGTTACAGGTATCCTAAGCACTTCACGTTGTGCGGCCCCACTACGCAGGACGTTTGCAGTGTCCAGGTCTGTGCGTCAAGGTGGGCCGAGTCCCGTATGGAAGCTCGGAAGGCTCAATCACGTTGCCGTCGCGGTTCCAGACCTGGAGAGAGCCACCGCTCTGTACCGGGACGTGCTAGGCGCACAGGTGAGCGCCAGGGTGCCACTGCCGGAGCACGGGGTCTACACCGTGTTTGTGGAACTGGGCAACACCAAGCTAGAGCTCCTGCACCCGCTGGGAGAGAAAAGCCCCATCGCGGGATTCCTGCAGAAGAACAAATCCGGCGGGATGCATCACATTTGTATCGAGGTGGATGATATCAACTCAGCTAtacgtgatttaaaggctaagaagATTCGGACTCTGTCGGAGGAGCCCCGCATCGGAGCGCACGGTAAACCTGTCATGTTTCTCCACCCTAAAGACTGTGATGGGGTGCTCGTGGAGCTGGAAGAGGCCTGACCTCGTACAGCCTACTGGGGACCGAGCAGGAGCTCCGAAATGGAAGGTAGAACTTAAAGGAAGAACAGACTTCCCAAAGAATTTCTGAAGACCTTGCAGTGGAGTGAAGTCCATTAAATCAATATTCCAGGATGCCTTCATTGTGACCCTGAGTGTAACACTAATGCAGAAGATGTGTAGGAGCGAGGGATACGTTTGTTAGTTTGAAttcttctctgttttatttgttgctgTTCTCTTTTCTTAGCATTTCTTTGGTACCCCTTCCATTCAAACATGCCTTAACACTTTGAGGACttgttactgtactgttttcCCTCGTGCAGTTGGTCTTTAAGGCcagagttgttttttattttatttgaagttgTCTGTATATTTGTGACATTGTTAATTTTCCAGATGATACTTGAGATGTAAATTGGCAgactgcattttcattttctacatCCAGCTGAATTCTGTATAATTTTCACCTCAGGTTGTAATGGCCAATTAAAGATTCAAGTCATTGCTTCAAGCAGAATGTGTCCAATTTGCTGCTATTTCATTAGAGATTGAAAGTGGATTTggaaactgttaaaaaataaatgattgaaatTCCTGGAATctattaattttactttataaCCTTGTTTTATGGAGCAGccttttttaattgatcaaattaaaatttgaattgtattttctaattttaaaaagtaaagtggatgagttttgttttcatacattttttggtggaaatgtagtgtttaatttaaacatttagcaATCGGTAGTTTCTTTGCAAGCATCTTTAAGTCAAAATtacatgttgtatttatttaattatttaatcatagTGCTGTTAATATTAAATTCTGTGTAAATATAACCTACCTTCagagcaaattatttttgtaatttgtttaacaCTGCAGTGACACATAAACCATTAAGGTTAACATTCTTGTGGTGCAGCTAAAATTTAAATAAGTTGGACTCAAAACCTGGCAAGTCTGGCAAGCAAagctgtcattttaaaacagcttgGATGGTTTCCACATCCAGCCAGCATACAATTTCACTCCtcaagtgcttttttttttccctcagctgAAATTCAAAGTGTTGCATTTTTAAGCAAAAGGAGGATTAAGCCACTGTATCTTGAGAGTGTCAGTAACCATATCTGTTCAACCCCTTTTAGTGTGGTCCCAGTGTGATTCGATATTCagtattttcttcttctaaataaactttttttttt

Function

symbol description
mcee Predicted to enable methylmalonyl-CoA epimerase activity. Predicted to be involved in L-methylmalonyl-CoA metabolic process. Orthologous to human MCEE (methylmalonyl-CoA epimerase).

NR:

description
PREDICTED: methylmalonyl-CoA epimerase, mitochondrial-like isoform X3

GO: NA

KEGG:

id description
K05606 MCEE, epi; methylmalonyl-CoA/ethylmalonyl-CoA epimerase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007471 True 1804 mRNA 0.41 3 19580418 19583227

Neighbor

gene id symbol gene type direction distance location
AMCG00007470 apba2,LOC108228832,LOC102306122,LOC103462423,LOC106961236 coding downstream 67439 19482612 ~ 19512979 (-)
AMCG00007459 NA coding downstream 393326 19182599 ~ 19187092 (-)
AMCG00007460 sord coding downstream 401372 19168814 ~ 19179046 (-)
AMCG00007463 NA coding downstream 439966 19137840 ~ 19140452 (-)
AMCG00007461 NA coding downstream 453398 19108984 ~ 19127020 (-)
AMCG00007475 NA coding upstream 19868 19603095 ~ 19622942 (-)
AMCG00007474 NA coding upstream 60726 19643953 ~ 19652843 (-)
AMCG00007477 NA coding upstream 130966 19714193 ~ 19717796 (-)
AMCG00007479 NA coding upstream 140980 19724207 ~ 19751795 (-)
AMCG00007480 NA coding upstream 217147 19800374 ~ 19818066 (-)
G24003 NA non-coding downstream 434 19579781 ~ 19579984 (-)
G23982 NA non-coding downstream 99331 19480014 ~ 19481087 (-)
G23875 NA non-coding downstream 678821 18901365 ~ 18901597 (-)
G23867 NA non-coding downstream 712939 18866767 ~ 18867479 (-)
G23854 NA non-coding downstream 750331 18829865 ~ 18830087 (-)
G24102 NA non-coding upstream 284631 19867858 ~ 19912916 (-)
G24213 NA non-coding upstream 705296 20288523 ~ 20288842 (-)
G24216 NA non-coding upstream 747473 20330700 ~ 20330902 (-)
G24218 LOC100538179 non-coding upstream 751844 20335071 ~ 20337168 (-)
G24219 NA non-coding upstream 754074 20337301 ~ 20339909 (-)
G23838 NA other downstream 802780 18776360 ~ 18777638 (-)
AMCG00007418 fem1b other downstream 1372398 18202459 ~ 18208020 (-)
G23661 NA other downstream 1521469 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 2958513 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 3234838 16320997 ~ 16345580 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 208474 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 331919 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 588102 20171329 ~ 20222004 (-)
G24217 NA other upstream 748286 20331513 ~ 20331811 (-)
AMCG00007500 NA other upstream 879277 20462504 ~ 20472919 (-)

Expression


Co-expression Network