AMCG00007481 (fam63b,LOC107750498)


Basic Information

Item Value
gene id AMCG00007481
gene name fam63b,LOC107750498
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19791701 ~ 19799752 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007481
ATGGAAGAATTAGAGGGGCAGCTGTACGCTGAATATCCAGtttccttgtttcttttctgtacaCAAATTGACGGATGCACATTCCACCCCCAGGGGCAGCTCTACCTACTGGTGACGGACCAGGGTTTCCTGACAGAGGAGAAGGTGGTTTGGGAGAGTCTGCACAACGTGGATGGCGACGGCAACTTCTGCGACTCAGAATTCCACCTGCGCCCCCCCTCTGACCCCGAGACGGTGTACAGGGGTCAGCAGGACCAGATCGACCAGGACTATCTGATGGCCCTATCACTGCAGCAAGAGCAGCAAAGCCAGGACCTGAACTGGGAGCAGATCCCAGAAGGGATCAGTGACCTGGAGCTGGCCAAGAAACtccaggaggaggaggaccgGCGGGCCTCTCAGTTCTaccaggagcaggagcaggcgCAGGCGGCTGCCGCACAGGGGCAGGGAGCTCAGCAGCCTCAGGGGGCCGCGGCCGCAGCCGGGGCAGCCCCCAGCGCGGGCAAACCCTCCGGGGGCAGCGAGCGCAAGCAGAAGAAAGAGCTgaaggaaaaagagaaagaaaaggacagaagaaaaaagtataatcTGCTTAAAGGACAATCTGTAGATTTCAACTTAAACATCCGAAGTACAGCCACGTCTCAGGCCTTTCCAGAAGGGATGTACCAATTAGCGACCTTCCGCTCCATGCGGATCTACGAACAGTGCGGCAGAGACAGCTTCTTCACAGAAACGTTTAGATGCAGTGAGTCCAAGTATTTATATTTGGCGTTGAGGCACACGGGGCTGTGCACCCTGTCAGTGAAGGATGTTGAGCAGGCTAGGATTGTGGGAATgacaaaagGCAATCTTTGA
>TU30182
ttatttttattttattttttcctctctttggATCAGTATACAGTGACTCGACCAAACAGAGTCTTTCTAGTAGCAAAAACAGTAGTTGTGTTCAAGGGGCCAGTGTCTCCATGTTTGACTGTGTTGCCAGAtaaagcatgtgtgtgtttgagtgagtgagagagagaggtgggtaGGGGGGGGTGTTGAACCAGCCAGAATATGGGAAGAGAGAATATGGCATAAATTTGTACCTTTCAGCCCTGAGAGGATCAACCCACTGCCCTCTTTGTGGGAGTTGGGAGCAGACAGAACCCCTCTCTCGCTGTGACGTCTTGCAATTTCATCTGTATTCTTTGCAAAGGTTTTCTTCATTATGTTTACAAGTTTGTTGACACATAAAGGCTTCGGGAGTCTGTGTTGTCAGAGGGATGTGCTCAGGAGCCCGCTGAGTGACCGAGTAATCCTAGGTTGCTGAGGATGCAACCACAGCCCCGCCCCCCCAACTCCTCTCTGTGTGCTGCACTCTGAAATGACTATACGGGCATTAATCTCAACCCAGTTTTACAATCTATACCTAACCCAGTTTTGCCTTACTAGGACATACACACTACTCTAACGCTTAATGTCCCAACAACTATTCTACATGTgagtgtgcatgcgtgtgtgcgcGCATCTGTGTGGGTATGTGTGCGTGTTGTGTGCGTTTTCTATAGTTGTATTACTATGTGGGTGAgttggcaaaaaaacaaaatagcactTATTTGTAGAATGATAGAGCAAAGTACAAATAAATCAGActtatctttttaaaaagggGAAACCAACACACGCTACATAGAGAAATATTATATACTAATATAAAGAGATAGAAGACATTGTTGAGAATGGTGAATAGCTCTCCCCACACTGGCTGAATTTATTGCTTCAGGAGAATCCCAGATAAATGAAAAATCGTCCCCTTGCAGTTAAACTCCAGCGGGCAGAAAAGACCAGGGCTGTTGTATCGCAGTCCGGGGCAGCTCAGGGGGTAGCAGAGAGGCTGTACCTCTGCAGAATCTGTGGGTCCGGACTCTCAGAGCTACGCCTTTAGCTTTAGTGACTATAAGTATTTACAGGTGATCTCTGCAGTGCTTTTCAATAACCCTGTTGCCTGCCCCTGGGgtaataattaatcaaacatgaaagcataaaaaacaaacaagtatacGGCAATGCTAGATTATATATTTGCTAGCAGGTAAAAGCTGCCCCTGCTGGCTGAAGCTCTGCAGAGGGATAGGGGCTGGGGAGCGGCAGTTCCTGTGATGCCCAGGTGGGGTCGTCTGCTTAATTCTCGCCTCCTGCCCAGTTGATCTGCTCAGCATGGCTTTgtgtggggaagaaaaaaatatcccCCTTAGTGTTGTCCCAAGTACATATACTATAGATAGATATACCCACACCACAAAGCAACTTCTGAGCTGAAGGGTTTGCTGTCTCCCTTGATCTTAATGGTACTGCCACTTTCTGAGAACGAATATTCTCAATGTATACATTCCAACTAAAATGCCTTTACTTACGcgaaaacatttttaacatgttgCCCTAGCACTCAGCCGCACTAAGGGAACTCACAGTAGTGGTTCACTGAAGGGATGTTATCTTCTTGTGACTTTTGTATTgagcactgtatttatttaaactgtgtaaagTGTAGTAATCCCTTGACGCCtaatttactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcaaaaaaGAAACGGAAAGCCTTACAGAAtaaccagattttttttttttttttctttgttgagaagaaaaaagtataatcTGCTTAAAGGACAATCTGTAGATTTCAACTTAAACATCCGAAGTACAGCCACGTCTCAGGCCTTTCCAGAAGGGATGTACCAATTAGCGACCTTCCGCTCCATGCGTACTTGATGCAGCATCTTCAGTAGAGAAACGTGTTCCTCCTTTGGCTGCACACTACAGAGGTGGAGTTGAAGAAAAAACGAGAGAGAAGAAATCTCTTTGTTCATGTTTGttgattttcattgttttgtgcaGAGGCTTGCATATTGTATGTTGGTTCATGTAGGAtgcatgtttgcatttgtatacCATGTTACAATGTTACAGTGTTAGCGTCACAGCTTAATGACTGTTTCTTTTTGTACTTGCAATTGAATATTACAAACGTAGTGATGGCTTCGAGTTTCAAAGGACTGCAGAGTATAGTGGGGATAAGGCCACATGTACCTGGTCAGATAATGTAAGCAACAAGGATTTTGCAAGGATGGAACTTGCTGAACACCTAAAAAGTGTACTGATGCATTTATGCTCCGTTTTTATAGTCTGAATATACTAAAAGATAATCAActtttatatattaatcattgCGAATTTCTTGTGAATTTGGGAGCTTTGTGTTTTAAAGGGAACTTAATTTCCCTTGAACAaatgcacatacatatatatcatgTATTTAGAAAATCTAGTAATGAATCACTTAATGGCATTCTAATTTGATGAGTAGCGTGTAGGCCCCTATTGTGACTTTTGAGAGCTCTGGCGTTAGCTGTGGTTAATACTTAGGATGGTCAGCTGATCATGAAAATGTGCATTGGTTAAAATACCTTGTAATATATAGATGTTCACAAAGAAACTgccaaataatatttttcacagGCTATACAGAACTCGAGCCTGGACAATGTGGATTCTGGACACTTATTGTATATATGTGAGTATTTACTGTGACTTTAGATCGAGTAACAAAGTTGTGAAGTAACACTAAATATTCTTAACATCTAACAGAATGCATGACTTCAGTTTCACTTAAAATTCATGTATCTCCCAATactcaaaattacaaaaagcaaaagggacattccagtttatttatattagcTATACTAAGAAGGTATGGCTCTGTGTTCTGTATCAGATCAGTAGGTTGAGATTGATGTTACTGAGCAAAAACAATGTAGGATTGACTGAAATTGGTGTTGTACAATAGATCTGTGTATCAGAATACAGCTTTTCAGGTACTGTTCATTAGATTGCTGTTTTACCTatagattaaaaacaattgtaacCTGGGGTTTTATTATCCTTCAGAGATTTTGTGTCTTGTAGCCCTGTCCTCTTTCAATATTGATGTGCAGGGTTGTGGCTATCAGTGGAAGAGGGCTGTAGACCTGCAGAACTGATTCAGGATTTGGGGGAAATGTACAATTATAGGTGTTGAACTACAAAAGGCAATCCTTGAAAATTAGTCCTTGTAATGCTTTTGCACTGTTACATGGATATGCACTAGAAAAAAAATACCTCATTTTATACAAAGTTGTGCAAGAGTACTTCTGTGCTCGAGGGTACCTTATCAGAAATGCAATGCAGTGCGCCCTGTGGCTCGTAGCAGGAGGGGACTGTACCCTCGCCTACTGCAAGAGTCGCGGCACTGCCTGCTTTAGTTTGCCCGACAGGATGGACACTCAAGCGATGCATTTTAAACGCTAAAAGGAAACAGAAGGCTGTGGGTCGGAGACTATCTTATCCAAGTGTCTGACACTAGGAATAATTATAAAAGTGTCCTTTGAAAGGGCAGGGATCTACGAACAGTGCGGCAGAGACAGCTTCTTCACAGAAACGGTGAAATAGTGGGCCAGAGCAGAAATCCATTCTATGAGGGAGTATGTTGCGATTGTCTTTTATTCGCTTCACAGTTTAGATGCAGTGAGTCCAAGTATTTATATTTGGCGTTGAGGCACACGGGGCTGTGCACCCTGTCAGTGAAGGATGTTGAGCAGGCTAGGATTGTGGGAATGTAACACATTTGCCTCCCCCCGCATTtctcaatgtttaaaatatggcTAGttgatttaattgcatttgcttGGAAACAACGCATGTTAATTGTGGTCTAgccaacattatatatatgtttttctttttaaaagcatttccttAGTGAATACAACTAATCTTTAGTATTGAATGTAAAATTAGGAAAGCTAAAAGTTTTGTTGCCCCTCATGTTTAAAACTAAACTGTTATAACACTAGCCCATGAGCACTACCACTACAAtgcatcaaaaaacaaatacagcaaaaaCGTATGCTGCATTCATGTACATAACATTGGATATAGGATTGTAAAACTAATTTAGCAGAGACAAAGTGCAAGTAGTCCATCATGGGTAAAACAGTGCTTGAGAAGGTTTATCAGAATTAATACTTGTGACCAAATGTGTGCAGCTTCTGTTCTGTTACAAACCATGTTGATGTAAATATTCTTCACACATTTATGTTTTCCCCCATCATTTGCAATCTTAGTTGGTAACAAAATGCCTTAGTAGACAATGGGCATTTTAGCcctatacaattatataataaaatctatagagaaaaacaaatgagatgCCAGATGCATTCTTTTTACCTCCAtgcagttgtattttatttgtgtaattctGGAGAGAAACAGCCTATCATGCCATTAAATTTGATTTACTCACAGATGTGCTTCagtaataaatgtaatgctttgagTATTGTGTGTGGCAAATCTTATATTTCATGTAGGCTGAGAGGGTAGAGTAGGTGACTGCAGGAGTCTGTTGCTGAAGATGGAAATAAATTCTGGATCATTAACCGCCCTGCTCAACCTTCCAGTCCAGAACTGGTGATGTTACTTGAACAAATGTGATGATTATTTActtccaaataaacaaaccagaccacatatacacaacaaaactaaatgtacaatgaaatgtacaatttattGTAAAGAATGCAATTTTGCAATCTTTGAAACCATATATATGAAacttcattacaaataaaaactaaagcTGTACATTATTTGAACAGATGTTATAACATGTATGTGCATGAACATGGGTTCATACTTTGATCACATCAAACTGTTGGTAAACACTACTTCACTTTTGTGCCATAGGAAAATCCAGCcaaggagggggggaggggggggaatcTACCCAAAAAttccaacaaaaaaataaaattcttaatataaaaaagattGATGTAAAGAAAGTTTAATCTTGGAAGTTTTACGAAGACTTCCCATTGCTCTGGCAGATGTCACGAGCACAGAAGTTAGAATCTTCTTGGAGCTCCTTTAAAAGGCTTGAATCCTGTCCCACTTCCTCCCGAGAGGGAACTGTTGGTAATCTGTACTATTCGGTTCATCCCTGGTGAAGAATGGCTATGAAAACAAgataagcttttaaaataacatccagCAAGGCTGACCTCAGGTtttcaaaggaagaaaaaaataaataaaaccaaaaaaaaaaaaaaacccagcaACATTCACTCTgctaaaactgtataaaactaTACTTGAGCAATGAGATCACTGAAATGAAGTCAAACTGCTGACACCAGCGTTCAAGACTGCTGCTTTACTCCACCAGCTGACTGGCGTTCACAGACCTACGTTTTTAATATGGGCTTTATTAGGACGCGATTCCGACGTGGCTCAGACATGCGGTTGTAACTCTAAATCGGGCTCAAGGAGggcattttcattaatttacaaaagGTAAGGTAGGCCATTGGTTTACAATGAGCAGCAGATGGGGCAGAGCGGTGACAGAGGGAGCACAGAGGCGGGCGGGACTGTTCAGCGCCTCTGCGGCTCGTACCTCGAGTGCTGGGCCATGATGCTCCGGCTGTGCCCCAGTCTGTGGGTGTCAGGGAAGCCAGTGCTCGGTGAGCCCGGGCCATGCCAGTCTTTCCTCGGGCCCTGGTCTCGGCTGTGCCGCTCTACCACCACTTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007481 False 861 mRNA 0.55 7 19792700 19799752
TU30182 True 5816 lncRNA 0.40 2 19791701 19797576

Neighbor

gene id symbol gene type direction distance location
AMCG00007479 NA coding downstream 39906 19724207 ~ 19751795 (-)
AMCG00007477 NA coding downstream 73905 19714193 ~ 19717796 (-)
AMCG00007474 NA coding downstream 138858 19643953 ~ 19652843 (-)
AMCG00007475 NA coding downstream 168759 19603095 ~ 19622942 (-)
AMCG00007471 mcee,LOC107750491,LOC107670763,LOC106587249 coding downstream 208474 19580418 ~ 19583227 (-)
AMCG00007480 NA coding upstream 622 19800374 ~ 19818066 (-)
AMCG00007485 NA coding upstream 125685 19925437 ~ 19929389 (-)
AMCG00007486 NA coding upstream 134384 19934136 ~ 19941835 (-)
AMCG00007484 NA coding upstream 144103 19943855 ~ 19957453 (-)
AMCG00007492 NA coding upstream 229380 20029132 ~ 20032795 (-)
G24003 NA non-coding downstream 211717 19579781 ~ 19579984 (-)
G23982 NA non-coding downstream 310614 19480014 ~ 19481087 (-)
G23875 NA non-coding downstream 890104 18901365 ~ 18901597 (-)
G23867 NA non-coding downstream 924222 18866767 ~ 18867479 (-)
G23854 NA non-coding downstream 961614 18829865 ~ 18830087 (-)
G24102 NA non-coding upstream 68106 19867858 ~ 19912916 (-)
G24213 NA non-coding upstream 488771 20288523 ~ 20288842 (-)
G24216 NA non-coding upstream 530948 20330700 ~ 20330902 (-)
G24218 LOC100538179 non-coding upstream 535319 20335071 ~ 20337168 (-)
G24219 NA non-coding upstream 537549 20337301 ~ 20339909 (-)
G23838 NA other downstream 1014063 18776360 ~ 18777638 (-)
AMCG00007418 fem1b other downstream 1583681 18202459 ~ 18208020 (-)
G23661 NA other downstream 1732752 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 3169796 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 3446121 16320997 ~ 16345580 (-)
AMCG00007487 NA other upstream 115394 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 371577 20171329 ~ 20222004 (-)
G24217 NA other upstream 531761 20331513 ~ 20331811 (-)
AMCG00007500 NA other upstream 662752 20462504 ~ 20472919 (-)
AMCG00007565 gatm other upstream 2540847 22340599 ~ 22358446 (-)

Expression


Co-expression Network