AMCG00007484


Basic Information

Item Value
gene id AMCG00007484
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19943855 ~ 19957453 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007484
GTTCAAGCTCAGTTTGCGTTAACAGGAAGGCATCTTTAAGCAAAGAAAGGAAATTGTCATCAGAACAAAGCTAATTGGGACGTGTTCTGGATACCAGTATAATGAACTAAATTGATCCCCCTGTCCCAGCAGCTCCTTGTGCGGCGAGCTCCCCGGGAGGAGGAGGGCAAGGGGGGTACAGGGATCGACCCGGGACGGGCCAATGCCAACTAGTGGCTACAGACAAACCCCTGTGAGGGCTTAAATGCGGAGCAGCTACACAGACGAGCCCTCACAGCTCTTCACAGCTCTGTCCTGTAAGGAGATCAAGTGAAAAGGCTGGTTAGGGAAAATGGAGAGGAAAAATAAGAGGAACCTGAAGGAGCGATTTGCCATGAGAAACAGCATCGTCAAGGAGGCTTTGGCAGAGTTTCTGGGGACATTCGTGCTCATTCTCTTTGGCTGCGGGTCGGTGGCCCAGACGGTTCTGAGCCGGGGGGCTCATGTTAACCCAGcagtctccctggccatgctgGTCCTGGGCAAGCTGAAGCTGGTGAAGTTCCCAGTGTACGTAGTGGCCCAGTTTCTTGGGGCGTTTGCTGGAGCGGCCGCCGTGTACGGGCTCTACTATGatgCCTTTATGGATTATACCAACGGCATTCTGACTGTTACTGGCCCCAATGCTACTGCACAGATTTTTGCTTCGTACCCAGGAAGACATCTGTCAATCCTGAATGGCTTCATCGATCAGGTCATAGGTACTGGTGCCTTGGTTCTCTGTATTCTGGCCATCTTGGACGGAAAGAACATTGGGGCCCCCAAAGGCATGGAGCCCCTGGTGATTGGCCTGATCATCATGGCTATCGGCGTCTCCATGAACCTGAACTGCGGATACCCCATCAACCCCGCCCGTGACCTGGGGCCGCGGCTTTTCACCGCAGTGGCAGGGTGGGGCACCGCTGTCTTCAGTGCTGGCAATAACTGGTGGTGGATTCCCGTGGCCGGGCCCTTGGTGGGGGGGATCGTGGGAGCTGTGCTGTACCTGCTCTTCATCGAGCTACACCACACTGAGCCGCAGAAACACTTGGAGGAGGAGAACAACGTCAAGGACAAGTACGAAATGATCACCATGAGTTAAGGCCCTACAGGGCTCCCTGACCCCCCCCCAGGCCACCGCATGTCTCAGCACTGCTAACTTAGACCCAAGGACTTCCATCTCAGACAGGCCTCTCTGAGGGTTGGTGCTTCTTGAACATGATGTATGAGAAAAGGCATCTAAACACAACCCTGACCAAGCCCCTCAGTAcaaaacacactttcacacaaacaaaatcacttttttacttttttgtagaTTTTCATTCTTCGTATATGCAGAGAGTTCTAGCATGTGAAGCTGTACACAGGGAATACCATTATTAAGCTTTCTAGAGTGAGGTTCTAACCTTTAATTTTCTGAAAACATGAGGTATAACCCTCCTAGCCCTTTACTGAACAGCATCACCACATTTGTCAACCAAAACCCCTCAGGGAAGCACGAAGTGTCAAGGCAGCCAAGATCCTGGCCCTAGATGGCTTCCTTAATTCCTAAAATTGAGAGccataatgaaaatgtacactAATAGCATGCTGTATGCCTTTAAAGAGTGAACACTTTCTCCACCATCCTTCACATGCGCCATGAATATTTTACTGTTCTATGTTCAGTTTTAATGTCCAGAATATGAACACCGAGTCTGTATTTACAGTTGACCTGATGATTGCACACGCATGTACGAATACATCTACAtgcacagcatttttttctttattttttcttacagaAATCAGCCTTAACATGCATTAGGTTTATCAGTACAGATCTTCACTAACACTTTTCTATGTAAGATAATGTGTTATGCAGTTGTGCTAGGTAGGAAGCACAAAAAGTATATACCATcatgaaacaaacagaaacaaaacactagCTGCCAGCTTTTCAATCCTCCTGGTTCAGACAAACCATTGAGTATGCAGTTCATAGAAAGGGATAGACATAAGTGTAAAATAAGTATCTTGCCACGGTAGATAGCTGCTCTGTAGCACAGTTTCTCTGTCACTGTGGGTTTGTtatgtaattcaattatttaatgaatgtgttGTGTTTAGTAATTGCTTCTTTTATCCAGGCAAAAACAttgttcttgatttttttttactctttatGTTGTTACTGTTATATCCTTGTTTCTCTTCCTAGGCAAAGGCACTTTCATTGATAATTGTCTTTTCTGTTGCTTTACTTTCCATACTGTTGTTTATGTTGCAGATTTTGttcaaaacaattatgaaatgaAAGCTAAGTATGTAGataatgcattatattaatACTGGTTTACATATagtaatatatagatatagttaTGTCTGtcttaatgaaaatattttccctgttgtccttattaaaatattttataaattgtatgTGTTCTTGGTATACTGATACAAACATGAGAAATACTATGACAAATGTGTACATGACTGaaaatacatcattaaaatgtgGCATCTCATTGTCAGTTGAGTCCCA

Function

GO: NA

KEGG:

id description
K09877 AQP9; aquaporin-9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007484 True 2551 mRNA 0.44 6 19943855 19957453

Neighbor

gene id symbol gene type direction distance location
AMCG00007486 NA coding downstream 2020 19934136 ~ 19941835 (-)
AMCG00007485 NA coding downstream 14466 19925437 ~ 19929389 (-)
AMCG00007480 NA coding downstream 125789 19800374 ~ 19818066 (-)
AMCG00007479 NA coding downstream 192060 19724207 ~ 19751795 (-)
AMCG00007477 NA coding downstream 226059 19714193 ~ 19717796 (-)
AMCG00007492 NA coding upstream 71679 20029132 ~ 20032795 (-)
AMCG00007491 NA coding upstream 77242 20034695 ~ 20053654 (-)
AMCG00007490 NA coding upstream 104479 20061932 ~ 20100721 (-)
AMCG00007489 NA coding upstream 154597 20112050 ~ 20142733 (-)
AMCG00007493 NA coding upstream 311218 20268671 ~ 20285201 (-)
G24102 NA non-coding downstream 30939 19867858 ~ 19912916 (-)
G24003 NA non-coding downstream 363871 19579781 ~ 19579984 (-)
G23982 NA non-coding downstream 462768 19480014 ~ 19481087 (-)
G23875 NA non-coding downstream 1042258 18901365 ~ 18901597 (-)
G23867 NA non-coding downstream 1076376 18866767 ~ 18867479 (-)
G24213 NA non-coding upstream 331070 20288523 ~ 20288842 (-)
G24216 NA non-coding upstream 373247 20330700 ~ 20330902 (-)
G24218 LOC100538179 non-coding upstream 377618 20335071 ~ 20337168 (-)
G24219 NA non-coding upstream 379848 20337301 ~ 20339909 (-)
G24221 NA non-coding upstream 386586 20344039 ~ 20344379 (-)
AMCG00007487 NA other downstream 20702 19915146 ~ 19923153 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 144103 19791701 ~ 19799752 (-)
G23838 NA other downstream 1166217 18776360 ~ 18777638 (-)
AMCG00007418 fem1b other downstream 1735835 18202459 ~ 18208020 (-)
G23661 NA other downstream 1884906 18055470 ~ 18058949 (-)
AMCG00007494 NA other upstream 213876 20171329 ~ 20222004 (-)
G24217 NA other upstream 374060 20331513 ~ 20331811 (-)
AMCG00007500 NA other upstream 505051 20462504 ~ 20472919 (-)
AMCG00007565 gatm other upstream 2383146 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 2604043 22561496 ~ 22576454 (-)

Expression


Co-expression Network