AMCG00007487


Basic Information

Item Value
gene id AMCG00007487
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19915146 ~ 19923153 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007487
ATGGTGCTGAAGTTCAAGTGGGAGGGCAACGCAGTGTGGGCGCACATCTGGAACAAGATGCAGACCATAATGCCCTGGAGGAAAGGACAGAGGGGACCGGAGCTGACTGTGGGCAAAATCCGGGTCAAGGCCGGGGAGACCCAGCAGAAgacGTCCTTCTGCTCCCAGAATGACGATCAGATGCAGTTGCAGCCGTCGCAGGAGAAGGTGTTTGTGCGCTGTGAGGGCAGGAGGGACGGGCACCGGAAGAGGAAAATCAgtgactga
>TU30203
NNNGATGGTGCTGAAGTTCAAGTGGGAGGGCAACGCAGTGTGGGCGCACATCTGGAACAAGATGCAGACCATAATGCCCTGGAGGAAAGGACAGAGGGGACCGGAGCTGACTGTGGGCAAAATCCGGGTCAAGGCCGGGGAGACCCAGCAGAAgacGTCCTTCTGCTCCCAGAATGACGATCAGATGCAGTTGCAGCCGTCGCAGGAGAAGGTGTTTGTGCGCTGTGAGGGCAGGAGGGACGGGCACCGGAAGAGGAAAATCAgtgactgagacacacacatgctgaaACACACTGCCAGCACTGCGGCCTGGGCCACAGAaacatttacatgaaaataCAACCACTGGGCCTCCTGCTGTGGCATGTGCCAGGCTGTGGtgatcagatttttattttcttgctgagaatgtactttttgtttgtttgtttgttttgttgtctgtttgtcCCTTCCCCATAGCCCCCTGCCCATTCCCACACCCCAAGCAAAACGGCTTAAGACCTTGAAACAACTATATATTGTTTGCCGTTCAGACATTACTTCACCGACGTATCTGAGACCAAAGATTGACCGAAACTCAAGAAAAGACCTTGCAGCAGGTGGAATAGTGAGGTAAATGAACTCTGAGGTTGCAGGAGCTTCATTACACCAAGCGGTCTTTGCATATCTCCCCCTTGCAAAGACTACTgtacataatgcattttaagacACTGACAATTAACTAGGTGTTTTTTGCTGAAGTAGGTAACATTCCCTCCACttcaaaaaacattaatactCAACTTAAAAATGCTTGTGAATATATCTTCAAAGATAATTTGGATATTTCTTCCAATCTaactatttaatgtatttatctatggGAGTGCAGTGGACAGTAATACACCAGACTAATCCAAGTCATGAAGGCACTGTAGAGCCCAAGATATCTCACTTCACTAGTAACTGCAGCAATGGACGAATAATGATGCATTATACTTCCAGACATCTTTTCAAGGGATTTcagaatactgtatatatggtAAATTCTCAAATACCAAAATCATAACAGAGCAGTCATAAAGTTTCAAACTGCTTCAGAGAAGACAATGGCCAATCTCTCCACCTTACTGCGATATTCTGAACCAGACGGTGAGAGCCGTGGTgtggtaaaaacatggtaatGTGTAGCGCACTGTGGTAAAAACCTTGTAACGTGTAGAGTGGtgaattttgaattatttaccTTTGCTTAAGTTTCCATAGTTGCCAGCACAGTTTATATCGATATTAAACTGCCACAAACCCAAATTAATGATTACAAATgcctttatttgtaattataatatcaTGACTGTCAAACAAAGTACCTCTGTCCTTTCCATGTAACATAATGATTATGCTCTAAAGCAGCGTTCTGCAAGAAGACATCAGTGACTGGAAAGCGTGAGTAATACAGACTTAGTGCTCATCTCACCCGCTGTGCTCACTGCATCATGGCGAATTGGAGATCTGATAGTGTCTATTGGGTGACACACACAACCCCAAATCTGATAAACACCAagacactgaacacaaacacacaccaggTGATATGGGAAAAAAGAGGGTATATACTATGGGCCAAAGAAGAGGCTGCAGTACATCAGTCTCCCATGACACACTTCTGTCCCCTACAACATGCTCTTCACCTCTACATTGTACAACACTTGTGACACACTAACTGGTGTCACGTATCCAAGGGTGTTGTAGTCTGTATATGACAACTGGCAGTGTGCTGATCTCTCATGAGacttattagtctgcatgttaAAGCATGCAGTCTTGATCTCCTGGAAGATTCCTCTTCATCCGTTCGTACAATCACAATCCCACAGCTTGGTGCAAACTTGGTGCAGTGATTTACCCTAATACCTAGTACGAtgattgtgcgtgtgtgtttttttttttttttttttttttaataataacatgttcaataataaaaaacatgatgaaaaagcaaaaacatgtaattgaaaCCAATGGTGAAACATTCAGATACCCCTCCTCAGCGAGCACAATTCGTTCTCCTATGCAATGTTCACATGAGTATCTTCAGATGCTTCAAATTCTTTCTTTTGAGGCATGTGATTTTCAGCATATATCCATTTATGTTTTGTAGAGATGTCTTAAAACTAGAAAACtcgaaatgttattttttaatatttgtttctggAATCATCATGATTAGTTTCTGCTGAG

Function

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0004806 triglyceride lipase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007487 False 267 mRNA 0.58 2 19917101 19923149
TU30203 True 2226 TUCP 0.41 2 19915146 19923153

Neighbor

gene id symbol gene type direction distance location
AMCG00007480 NA coding downstream 97080 19800374 ~ 19818066 (-)
AMCG00007479 NA coding downstream 163351 19724207 ~ 19751795 (-)
AMCG00007477 NA coding downstream 197350 19714193 ~ 19717796 (-)
AMCG00007474 NA coding downstream 262303 19643953 ~ 19652843 (-)
AMCG00007475 NA coding downstream 292204 19603095 ~ 19622942 (-)
AMCG00007485 NA coding upstream 2284 19925437 ~ 19929389 (-)
AMCG00007486 NA coding upstream 10983 19934136 ~ 19941835 (-)
AMCG00007484 NA coding upstream 20702 19943855 ~ 19957453 (-)
AMCG00007492 NA coding upstream 105979 20029132 ~ 20032795 (-)
AMCG00007491 NA coding upstream 111542 20034695 ~ 20053654 (-)
G24102 NA non-coding downstream 2230 19867858 ~ 19912916 (-)
G24003 NA non-coding downstream 335162 19579781 ~ 19579984 (-)
G23982 NA non-coding downstream 434059 19480014 ~ 19481087 (-)
G23875 NA non-coding downstream 1013549 18901365 ~ 18901597 (-)
G23867 NA non-coding downstream 1047667 18866767 ~ 18867479 (-)
G24213 NA non-coding upstream 365370 20288523 ~ 20288842 (-)
G24216 NA non-coding upstream 407547 20330700 ~ 20330902 (-)
G24218 LOC100538179 non-coding upstream 411918 20335071 ~ 20337168 (-)
G24219 NA non-coding upstream 414148 20337301 ~ 20339909 (-)
G24221 NA non-coding upstream 420886 20344039 ~ 20344379 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 115394 19791701 ~ 19799752 (-)
G23838 NA other downstream 1137508 18776360 ~ 18777638 (-)
AMCG00007418 fem1b other downstream 1707126 18202459 ~ 18208020 (-)
G23661 NA other downstream 1856197 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 3293241 16469467 ~ 16621905 (-)
AMCG00007494 NA other upstream 248176 20171329 ~ 20222004 (-)
G24217 NA other upstream 408360 20331513 ~ 20331811 (-)
AMCG00007500 NA other upstream 539351 20462504 ~ 20472919 (-)
AMCG00007565 gatm other upstream 2417446 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 2638343 22561496 ~ 22576454 (-)

Expression


Co-expression Network