AMCG00007500


Basic Information

Item Value
gene id AMCG00007500
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 20462504 ~ 20472919 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007500
ATGGCAGCTACAACTGCACGGCTTTTTGTGTGTTACTTCGGTCGCAACTGCGCTTCGCACAACATCGCCATCAACAACAGCAACCCTTTCCACAAGCAAAAACAGCTGGCGGTGCGCGAAATGAAaaAGGTACCTTTATCGACGATGTCTGGTACTGTAGGCTATGCATCTGGGAGAGTGGATTCTTCCCACGCTTGTGCGAATTTGGGTAATCCTGTGTTTTCCTGCATGATAAAGCCCGGGACTCCCTCCACATCTTCGGTCTCACTGGGACGACATCAGAACCTTCTCTATAAAACTACATCCAGTGAATATGGTGTCATTTCTCCCACGTTTGAAACGGCTCCCTGTACTTACCACCCAATGTCACAGAAATTCTCTCAGCACCTTGGAAACTGTGGAATGTACCGGAACAGCTCCTTTAACACGAGCCTGGACAGAAGCAATGTGTCCTTCAGCTCTGGCACCTCAGTGTTCATTGCTCGCCTGGCATCAGCCTGCTTTTTCAACCACTTTTCCAAGAAATACACATTCAGAGGCCTGTTCTACTGGGCCACAAGGCTGCGGAGGGTTTTTCTGTGTGTCATTGCTGGGATGGATGCCATTCAGTTTGTCCAGACTGTTCGAGTGGATGCCTTCCTGATTGACTGGAGCATTCCGGTTGAAACCTTTCAG
>TU30382
CGGGGCAAAGGCTATTTGCGCAGATGTCGTTTTCGTGTTGCGCAAATGTCGGCAGTTCTGCGAGTATTTGCACCTTTAAACCAATTGCATTACAAGAAACTTGCAGATCTGTACAGAACTGCAAGAATCTGCGCAACAACAATGCGAACAGTACCTGCGAGAGGTCTGTCACAGCTCGCCGTACCAGCTGATTCTCCCTGAACCCAATCGGACGCCGTTGCTAAGTTCAAGTAACCATAACAAACATCCAGTCGGTGGTGCTGATCTGTCTACTGGTTACATTTGGCAACAGTATTGGCTGCAGCACAGTCTGGATCTCAACTGCAAATTTCCAGaaAGGTACCTTTATCGACGATGTCTGGTACTGTAGGCTATGCATCTGGGAGAGTGGATTCTTCCCACGCTTGTGCGAATTTGGGTAATCCTGTGTTTTCCTGCATGATAAAGCCCGGGACTCCCTCCACATCTTCGGTCTCACTGGGACGACATCAGAACCTTCTCTATAAAACTACATCCAGTGAATATGGTGTCATTTCTCCCACGTTTGAAACGGCTCCCTGTACTTACCACCCAATGTCACAGAAATTCTCTCAGCACCTTGGAAACTGTGGAATGTACCGGAACAGCTCCTTTAACACGAGCCTGGACAGAAGCAATGTGTATGATTGTCCCAATCTGCAGAATACTCTTTGAATCACTGgaaaactgtaatgtttttacaGTCTTCCATCACTCTCCTTTATAGTAATTTGTAACATAATCAGTTCCTGTAATATTCTGTAAtatgtaatgttattgttttcttcacatctttttattttgcattaaaaagatACATCACCCATTTAATATTATCCTTTGTTTTAACTGCACATCATGCCACAAATCTGCTTCAATTGTGTATGATAGCATCttactgaagtgcagaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007500 False 675 mRNA 0.49 4 20462504 20472919
TU30382 True 932 TUCP 0.43 2 20471111 20472704

Neighbor

gene id symbol gene type direction distance location
AMCG00007493 NA coding downstream 177303 20268671 ~ 20285201 (-)
AMCG00007489 NA coding downstream 319771 20112050 ~ 20142733 (-)
AMCG00007490 NA coding downstream 361783 20061932 ~ 20100721 (-)
AMCG00007491 NA coding downstream 408850 20034695 ~ 20053654 (-)
AMCG00007492 NA coding downstream 429709 20029132 ~ 20032795 (-)
AMCG00007502 NA coding upstream 14512 20487431 ~ 20492501 (-)
AMCG00007507 NA coding upstream 114653 20587572 ~ 20589199 (-)
AMCG00007508 unc13c,LOC108411445 coding upstream 133264 20606183 ~ 20618162 (-)
AMCG00007511 unc13c,LOC108411445 coding upstream 175338 20648257 ~ 20676334 (-)
AMCG00007510 unc13c,LOC107712779,LOC108411445,LOC107554226 coding upstream 240632 20713551 ~ 20717142 (-)
G24221 NA non-coding downstream 118125 20344039 ~ 20344379 (-)
G24219 NA non-coding downstream 122595 20337301 ~ 20339909 (-)
G24218 LOC100538179 non-coding downstream 125336 20335071 ~ 20337168 (-)
G24216 NA non-coding downstream 131602 20330700 ~ 20330902 (-)
G24213 NA non-coding downstream 173662 20288523 ~ 20288842 (-)
G24271 rsl24d1,LOC105018348 non-coding upstream 40867 20513786 ~ 20517473 (-)
G24335 NA non-coding upstream 587341 21060260 ~ 21066733 (-)
G24410 NA non-coding upstream 677355 21150274 ~ 21177594 (-)
G24409 NA non-coding upstream 708002 21180921 ~ 21186161 (-)
G24430 NA non-coding upstream 823459 21296378 ~ 21375032 (-)
G24217 NA other downstream 130693 20331513 ~ 20331811 (-)
AMCG00007494 NA other downstream 240500 20171329 ~ 20222004 (-)
AMCG00007487 NA other downstream 539351 19915146 ~ 19923153 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 662752 19791701 ~ 19799752 (-)
G23838 NA other downstream 1684866 18776360 ~ 18777638 (-)
AMCG00007565 gatm other upstream 1867680 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 2088577 22561496 ~ 22576454 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other upstream 2934009 23406928 ~ 23420303 (-)
G25026 NA other upstream 3498752 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 3789771 24262690 ~ 24281564 (-)

Expression


Co-expression Network