AMCG00007511 (unc13c,LOC108411445)


Basic Information

Item Value
gene id AMCG00007511
gene name unc13c,LOC108411445
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 20648257 ~ 20676334 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007511
ATGCGTGAAGAGAGCCAAGCAGTGATGCCCCTCATGCGGAGGCCCGTGGTGAATGTGTACCACATtgaATGTCACAACTCCACAGACAGGATAAAGGTGAGAGTCTGGGATGAAGACGACGATATCAAGTCTCGAGTAAagcagcatttcaaaaaagaatCTGATGACTTTCTTGGCCAAACAATCATTGAAGTGAGAACGCTGAGTGGGGAAATGGACGTCTGGTACAACCTAGAAAAGCGAACAGATAAATCAGCGGTATCTGGTGCCATTCGACTGAAGATCAGCGTAGAAATGAAAGGCGAAGAAAAAGTGGCTCCATACCATGGGCAGTATACATGCTTACATGAGAACCTGTTTCATTATTTGACTGAAGTAAAGAATGGTGGAGTGGTGAAGATCCCTGAGGTCAAAGGTGATGAAGCCTGGAAGGTTTACTTTGACGACGTATCTCAAGAAATTGTTGATGAGTTTGCCATGCGATATGGAGTAGAATCTATATACCAGGCAATGACCCACTTCTCTTGCCTGTCTTCCAAGTACATGTGCCCTGGAGTCCCTGCAGTAATGAGCACTCTGCTGGCCAACATCAATGCCTATTATGCTCACACCACAGCCACCACCAACGTCTCAGCCTCGGACCGCTTTGCAGCTTCAAATTTCGGAGATAATTTCCCTGCTGGCAATCCTGAGAGGCTCCAGGATTTAAAATCAACAGTGGACCTGCTAACCAGCATCACCTTCTTCCGAATGAAGGTTCAGGAGCTGCAGAGTCCACCAAGAGCAAGCATGGTAGTAAAAGATTGTGTGAGGGCTTGTCTGGACTCCACATACAAGTACATTTTTGACAACTGCCACGATCTCTACAACCAACTTCTTGATCAGGCCAAAAAACTAGAAATCCCAAGAGAGGAGCAAGGACCCTCTATCAAAAATTTGGATTTCTGGCCCAAACTCATCACACTGATGGTCTCTGTGATCGATGAAGACAGGACAGCATACACTCCTGTTCTGAATCAGTTCCCTCAAGAGCTGAACATGGGCAAGATAAGCGCAGAGATCATGTGGAGTCTCTTTGCCCTGGATATGAAGTATGCAATGGAAGGTTGGTAA

Function

symbol description
unc13c Orthologous to human UNC13C (unc-13 homolog C).

NR:

description
PREDICTED: protein unc-13 homolog C isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007511 True 1113 mRNA 0.46 9 20648257 20676334

Neighbor

gene id symbol gene type direction distance location
AMCG00007508 unc13c,LOC108411445 coding downstream 30095 20606183 ~ 20618162 (-)
AMCG00007507 NA coding downstream 59058 20587572 ~ 20589199 (-)
AMCG00007502 NA coding downstream 155756 20487431 ~ 20492501 (-)
AMCG00007493 NA coding downstream 363056 20268671 ~ 20285201 (-)
AMCG00007489 NA coding downstream 505524 20112050 ~ 20142733 (-)
AMCG00007510 unc13c,LOC107712779,LOC108411445,LOC107554226 coding upstream 37217 20713551 ~ 20717142 (-)
AMCG00007520 mapk6,LOC107588533,LOC107747613,LOC107550634,LOC107704268,LOC107746943 coding upstream 538282 21214616 ~ 21224494 (-)
AMCG00007521 leo1,LOC102793363,LOC106594225 coding upstream 581244 21257578 ~ 21264539 (-)
AMCG00007526 NA coding upstream 645898 21322232 ~ 21335390 (-)
AMCG00007527 tnfaip8l3,LOC107746937,LOC107588557,LOC107700582 coding upstream 678186 21354520 ~ 21357001 (-)
G24271 rsl24d1,LOC105018348 non-coding downstream 130784 20513786 ~ 20517473 (-)
G24243 NA non-coding downstream 181822 20465253 ~ 20466435 (-)
G24221 NA non-coding downstream 303878 20344039 ~ 20344379 (-)
G24219 NA non-coding downstream 308348 20337301 ~ 20339909 (-)
G24218 LOC100538179 non-coding downstream 311089 20335071 ~ 20337168 (-)
G24335 NA non-coding upstream 383926 21060260 ~ 21066733 (-)
G24410 NA non-coding upstream 473940 21150274 ~ 21177594 (-)
G24409 NA non-coding upstream 504587 21180921 ~ 21186161 (-)
G24430 NA non-coding upstream 620044 21296378 ~ 21375032 (-)
G24464 NA non-coding upstream 1035188 21711522 ~ 21718039 (-)
AMCG00007500 NA other downstream 175338 20462504 ~ 20472919 (-)
G24217 NA other downstream 316446 20331513 ~ 20331811 (-)
AMCG00007494 NA other downstream 426253 20171329 ~ 20222004 (-)
AMCG00007487 NA other downstream 725104 19915146 ~ 19923153 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 848505 19791701 ~ 19799752 (-)
AMCG00007565 gatm other upstream 1664265 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 1885162 22561496 ~ 22576454 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other upstream 2730594 23406928 ~ 23420303 (-)
G25026 NA other upstream 3295337 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 3586356 24262690 ~ 24281564 (-)

Expression


Co-expression Network