AMCG00007514 (arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706)


Basic Information

Item Value
gene id AMCG00007514
gene name arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 21060159 ~ 21066783 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007514
CcaggaagtaaaacaaaactacataTCCCAGAATTCCATGCACAGCCTTTTCATAAAACGTgaaatttacttattttgttggTTGTTTCTCAAATTCGTGATAGACACATTTTACtaaatatgtatagatattCGGTTTGTGGAAAATACGAtagttttacctttttttccgtttaaaaaaagttaacgctgtacacacacacaaaaaaaagcccGAGAATGACGTTTTAAAACGGGCAGCCATTTTTTTGCGGGAGGAGGTATTTGAGACAGCGAGTTGGGAGTGAGAGGGAAGCTTCCTATTTTCTcccatttgtttccatttatttacaGTCATGTCTGGGGAGATGGAAGAAACAAAGACCATCGAAGAAGCATCAACCGAAGAGCAGCGGGAAATGGAGGATAAGGTGATCAGCCCTGAGAAGGTGGAAGAGGCGAAGCTGAAAGCTCGGTATCCTCACCTCGGTGCCAAGCCTGGGGGCTCAGACTTCCTCAGGAAAAGACTTCAGAAAGGGcaaaaatattttgattctgGGGACTACAACATGGCGAAGGCCAAGATGAAGAACAAGCAACTACCTACTGCCACTGCAGAGAAGGCGGAGATAACTGGAGACCACATCCCCACACCGCAAGACCTGCCTCAGAGAAAACCCTCTCTCGTTGCTAGCAAGCTGGCAGGTTGATGGGAGCTTTACGACTGCACTGCTTTTGTTCTCATTCCTCTTTTCTCATCCCTGTTATTGTCCCCCTTCATCtattagttttcttattttctttgtatttttttttctttttatacttCCATTGATAAGCGCTCTAAGAACACTTGACTGGTAGGCAGATTCCAGTAACTAGTGCTGCTTAAGGAGAAGTTCACAAAGTGTAGTACCTGGAATAGATGCTGAGGAAGAATCCTAAAGCTTGCAAAGTTATACTTGAtggtttaaatgtactgtagttTTTGATTGAAAGTGTACATATTTCCTAGTGTTTGGAGTGATGGCAGGAGTCAACATTTTagaaagttttacatttttactgtaTCATTCCTTATCTTCATCTAAATTATGAAGTAATGTGcttgaattatttaatataatcttCAATTATGTACGtctttccccctccccccatcacACCCTTATTACTGctatgttctttgttttatatattaagaaataaagaatggacCATACAGATATTGCAGCAGAGTAATGttatggagaaaaaataataatctgaaaatcAAAAAAAGAGCATGTGTGAAACTAGGTTCTAACAGGTTGGTGTTTGCTTGCCTAAAATCTTGAATTTCAAAAATGGCCTTAAACCTCATTCAGCTTTATCAATTGCAGTTTTTCTTGGGCAATATTTGTCCACCCTGGAAAAATCCTTGTGAACCTAGTCCTGAATGTGTgctgaaaactatttaaaaccaTTCTCATTTAGGTTTTCTAGCTGGTAACTCACTAAGGAAATGTTTGAAGTGTGCATGTGCATAGACTGTGCAGTCACATTTGTGccattttttgtaaataaaatagttttgcacAAATGCCCtcacttgcat
>TU30494
ATTTTTTTGCGGGAGGAGGTATTTGAGACAGCGAGTTGGGAGTGAGAGGGAAGCTTCCTATTTTCTcccatttgtttccatttatttacaGTCATGTCTGGGGAGATGGAAGAAACAAAGACCATCGAAGAAGCATCAACCGAAGAGCAGCGGGAAATGGAGGATAAGGTGATCAGCCCTGAGAAGGTGGAAGAGGCGAAGCTGAAAGCTCGGTATCCTCACCTCGGTGCCAAGCCTGGGGGCTCAGACTTCCTCAGGAAAAGACTTCAGAAAGGGcaaaaatattttgattctgGGGACTACAACATGGCGAAGGCCAAGATGAAGAACAAGCAACTACCTACTGCCACTGCAGAGAAGGCGGAGATAACTGGAGACCACATCCCCACACCGCAAGACCTGCCTCAGAGAAAACCCTCTCTCGTTGCTAGCAAGCTGGCAGGTTGATGGGAGCTTTACGACTGCACTGCTTTTGTTCTCATTCCTCTTTTCTCATCCCTGTTATTGTCCCCCTTCATCtattagttttcttattttctttgtatttttttttctttttatacttCCATTGATAAGCGCTCTAAGAACACTTGACTGGTAGGCAGATTCCAGTAACTAGTGCTGCTTAAGGAGAAGTTCACAAAGTGTAGTACCTGGAATAGATGCTGAGGAAGAATCCTAAAGCTTGCAAAGTTATACTTGAtggtttaaatgtactgtagttTTTGATTGAAAGTGTACATATTTCCTAGTGTTTGGAGTGATGGCAGGAGTCAACATTTTagaaagttttacatttttactgtaTCATTCCTTATCTTCATCTAAATTATGAAGTAATGTGcttgaattatttaatataatcttCAATTATGTACGtctttccccctccccccatcacACCCTTATTACTGctatgttctttgttttatatattaagaaataaagaatggacCATACAGATATTGCAGCAGAGTAATGttatggagaaaaaataataatctgaaaatcAAAAAAAGAGCATGTGTGAAACTAGGTTCTAACAGGTTGGTGTTTGCTTGCCTAAAATCTTGAATTTCAAAAATGGCCTTAAACCTCATTCAGCTTTATCAATTGCAGTTTTTCTTGGGCAATATTTGTCCACCCTGGAAAAATCCTTGTGAACCTAGTCCTGAATGTGTgctgaaaactatttaaaaccaTTCTCATTTAGGTTTTCTAGCTGGTAACTCACTAAGGAAATGTTTGAAGTGTGCATGTGCATAGACTGTGCAGTCACATTTGTGccattttttgtaaataaaatagttttgcacAAATGCCCtcacttgcattttattcattgCCTGAAACTGCTAAGTAACACTGGC

Function

symbol description
arpp19 Enables potassium channel regulator activity and signaling receptor binding activity. Involved in G2/M transition of mitotic cell cycle and positive regulation of gluconeogenesis. Predicted to be located in nucleoplasm. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: cAMP-regulated phosphoprotein 19

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007514 True 1576 mRNA 0.39 3 21060159 21066747
TU30494 False 1370 TUCP 0.40 3 21060401 21066783

Neighbor

gene id symbol gene type direction distance location
AMCG00007513 fam214a coding upstream 3308 21048919 ~ 21056851 (+)
AMCG00007512 onecut1,LOC107676486,LOC107746960,LOC107712763 coding upstream 50592 21000014 ~ 21009567 (+)
AMCG00007503 rsl24d1,LOC105018348 coding upstream 542040 20513733 ~ 20518119 (+)
AMCG00007504 rab27a,LOC106587426,LOC106562223 coding upstream 547800 20504899 ~ 20512359 (+)
AMCG00007505 NA coding upstream 573121 20472817 ~ 20487038 (+)
AMCG00007516 myo5aa,myo5a,LOC107746947 coding downstream 19203 21085986 ~ 21125981 (+)
AMCG00007518 myo5c coding downstream 64457 21131240 ~ 21146416 (+)
AMCG00007519 NA coding downstream 84794 21151577 ~ 21159558 (+)
AMCG00007515 gnb5,LOC103156493,LOC106947723,LOC106932415 coding downstream 96037 21162820 ~ 21177602 (+)
AMCG00007517 NA coding downstream 114067 21180850 ~ 21186026 (+)
G24311 NA non-coding upstream 179235 20880546 ~ 20880924 (+)
G24310 NA non-coding upstream 183374 20876584 ~ 20876785 (+)
G24256 NA non-coding upstream 566154 20492904 ~ 20494005 (+)
G24258 NA non-coding upstream 567542 20492396 ~ 20492617 (+)
G24255 NA non-coding upstream 570403 20489297 ~ 20489756 (+)
G24384 NA non-coding downstream 319442 21386225 ~ 21398047 (+)
G24570 NA non-coding downstream 1078056 22144839 ~ 22148238 (+)
G24654 NA non-coding downstream 1273953 22340736 ~ 22343616 (+)
G24692 NA non-coding downstream 1383324 22450107 ~ 22450404 (+)
G24693 NA non-coding downstream 1387033 22453816 ~ 22454055 (+)
AMCG00007483 NA other upstream 1108731 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 2004026 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 2045260 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 2489687 18567242 ~ 18570472 (+)
G23724 NA other upstream 2767821 18290108 ~ 18292338 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 1064790 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 1122462 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 1196737 22263520 ~ 22266409 (+)
G24606 NA other downstream 1214917 22281700 ~ 22282958 (+)
AMCG00007585 star5,stard5,LOC104953929 other downstream 2067028 23133811 ~ 23139521 (+)

Expression


Co-expression Network