AMCG00007529


Basic Information

Item Value
gene id AMCG00007529
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 21397686 ~ 21402540 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007529
ATGATCCCCAGCAAAACATGTGGTGCTGAAGAAGTCTGCAATATCTTCACAGCATATCTCTTCTACAACATTCCTAAAATGAAACAGGTACCATTGAAAGAAGTGATGGCGAAGATGCTAATTCCAGTTCAGCAAAACATCACAGATGTGTCGCCGGAGATGATGTCTGGTGCTACAGCAACGCTCTTGGTCCTGCTGGGTCTGCTTATGGTGGCATGGAATTGTGGAGCTAAATCCTCCATACCAGGTCCGGGTTTCTGTATGGGAATTGGGCCCTTTGTTTCATACACCAGATTTTTATGGACTGGAATAGGGACAGCAAGCAATTACTACAATGACAAGTATGGAGATATCGTGAAGGTCTGGATTAATGGAGAGGAAACACTCATTATTAGTAGGTCCTCTGCTGTCTATCATGTGCTGAAAAATGGACAGTACATATCACGTTTTGGAAGTAAACAAGGACTGCAGTGTGTTGGGATGCATGAAAATGGTATCATTTTTAACTGTAATGTAACTCTTTGGAAGAAAACACGAACCTATTTTGCCAAAGCTCTGACAGGGCCCTGCCTGCAGCAGACGCTAGCGGCCTGCACACTGTCCACCAACACGCACCTGGATGGACTGGCGGGCAACACTGACCACGAGGGCCGCGTGGATGTCCTGCACTTCCTGAGATGCACCATCTTAGATATAAATAACAAGCTGTTTCTGAGACTCCCGCTGGATGaaaaggaGATTGTGCAAAAAATTCAGAGGTATTTTGACTCTTGGCAAGCACTCCTTATTAAGCCAGACATCTTCTTCAGATTCAAGTGGatgtataataaacataaaagtgCAGCacAGGAGTTACCAGAAGTCATTGAGAACCTGGTTGAGGTCAAACGAAAGGCACTCCACGAAGCAGAGAAGCTGGATGACATCGATTTTGCTTCAGACTTGATATTTGCTCAGAATCATGGAGAGCTGTCTGCAGACAACGTGAGGCAATGTCTGCTGGAGATGTTGATAGCAGCACCTGACACGATGTCTCTCAgcctgtattttatgttaatgctCCTCAAACAGCACCCCGAGGTCGAACAGAAACTACTGGACGAAATTGATGCTTTAATAGGGGATAAAGAATTGCAAAACAGCGACTTACAGAATTTAAAAGTGCTGGAGAATTTTATCAACGAGTCTCTGAGATTTCATCCCGTGGTGGACTTCACAATGAGGAAGGCATTAGCAGATGATGTCATCGAGGGCTACAGGGTGAAGAAGGGAACCAACATCATTCTGAACATGGGACGAATGCACAGGGGGGCCTTCTTTCCAAAGCCACACGAGTTCAGCCTGGGGAACTTTGAGAACAACGTGCCCAGCCGTTTCTTTCAGCCATTTGGCTCTGGGCCCAGGTCCTGTGTTGGGAAGCACATGGCCATGCTGATGATGAAGGTGATCTTGGTGACTCTTCTGCAGCGATACACAGTTTGTCCTCAGGATGGCTGCACTTTCCACGACATCAAGCAGACCAACAATCTCTCCCGGCACCCTGTTGAAGAGAGCAACAGCCTGGACATGTTGTTCATTCCCAGACAAAAATCGAACAAATAG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K07434 CYP19A; aromatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007529 True 1602 mRNA 0.46 9 21397686 21402540

Neighbor

gene id symbol gene type direction distance location
AMCG00007527 tnfaip8l3,LOC107746937,LOC107588557,LOC107700582 coding downstream 40685 21354520 ~ 21357001 (-)
AMCG00007526 NA coding downstream 62296 21322232 ~ 21335390 (-)
AMCG00007521 leo1,LOC102793363,LOC106594225 coding downstream 133147 21257578 ~ 21264539 (-)
AMCG00007520 mapk6,LOC107588533,LOC107747613,LOC107550634,LOC107704268,LOC107746943 coding downstream 173192 21214616 ~ 21224494 (-)
AMCG00007510 unc13c,LOC107712779,LOC108411445,LOC107554226 coding downstream 680544 20713551 ~ 20717142 (-)
AMCG00007530 dmxl2,LOC107700583 coding upstream 22393 21424933 ~ 21453417 (-)
AMCG00007535 myef2 coding upstream 358128 21760668 ~ 21769423 (-)
AMCG00007545 fbn1 coding upstream 408940 21811480 ~ 21880303 (-)
AMCG00007544 NA coding upstream 495827 21898367 ~ 21918778 (-)
AMCG00007540 NA coding upstream 523409 21925949 ~ 21942925 (-)
G24430 NA non-coding downstream 22654 21296378 ~ 21375032 (-)
G24409 NA non-coding downstream 211525 21180921 ~ 21186161 (-)
G24410 NA non-coding downstream 220092 21150274 ~ 21177594 (-)
G24335 NA non-coding downstream 330953 21060260 ~ 21066733 (-)
G24271 rsl24d1,LOC105018348 non-coding downstream 880213 20513786 ~ 20517473 (-)
G24464 NA non-coding upstream 308982 21711522 ~ 21718039 (-)
G24469 NA non-coding upstream 353051 21755591 ~ 21755946 (-)
G24470 NA non-coding upstream 355347 21757887 ~ 21758169 (-)
G24503 NA non-coding upstream 403580 21806120 ~ 21807061 (-)
G24515 NA non-coding upstream 540412 21942952 ~ 21943671 (-)
AMCG00007500 NA other downstream 924767 20462504 ~ 20472919 (-)
G24217 NA other downstream 1065875 20331513 ~ 20331811 (-)
AMCG00007494 NA other downstream 1175682 20171329 ~ 20222004 (-)
AMCG00007487 NA other downstream 1474533 19915146 ~ 19923153 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 1597934 19791701 ~ 19799752 (-)
AMCG00007565 gatm other upstream 938059 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 1158956 22561496 ~ 22576454 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other upstream 2004388 23406928 ~ 23420303 (-)
G25026 NA other upstream 2569131 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 2860150 24262690 ~ 24281564 (-)

Expression


Co-expression Network