Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007532 |
| gene name | dut |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 21803173 ~ 21807057 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| dut | Predicted to enable dUTP diphosphatase activity and magnesium ion binding activity. Predicted to be involved in dUMP biosynthetic process and dUTP catabolic process. Predicted to act upstream of or within nucleotide metabolic process. Is expressed in digestive system; nervous system; neural plate; pectoral fin; and tail bud. Orthologous to human DUT (deoxyuridine triphosphatase). |
| description |
|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0046080 | dUTP metabolic process | biological_process |
| GO:0004170 | dUTP diphosphatase activity | molecular_function |
| id | description |
|---|---|
| K01520 | dut, DUT; dUTP pyrophosphatase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007532 | True | 1038 | mRNA | 0.47 | 7 | 21803173 | 21807057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007534 | NA | coding | upstream | 2521 | 21781383 ~ 21800652 (+) |
| AMCG00007533 | LOC108412301 | coding | upstream | 42990 | 21755790 ~ 21760183 (+) |
| AMCG00007531 | sema6d,LOC107557846 | coding | upstream | 85147 | 21699051 ~ 21718026 (+) |
| AMCG00007528 | NA | coding | upstream | 363887 | 21400786 ~ 21439286 (+) |
| AMCG00007524 | NA | coding | upstream | 453220 | 21336522 ~ 21349953 (+) |
| AMCG00007538 | NA | coding | downstream | 177187 | 21984244 ~ 22007621 (+) |
| AMCG00007536 | fgf7 | coding | downstream | 226185 | 22033242 ~ 22033908 (+) |
| AMCG00007537 | NA | coding | downstream | 243224 | 22050281 ~ 22052621 (+) |
| AMCG00007548 | NA | coding | downstream | 316590 | 22123647 ~ 22129477 (+) |
| AMCG00007546 | bloc1s6 | coding | downstream | 346620 | 22153677 ~ 22158549 (+) |
| G24384 | NA | non-coding | upstream | 405126 | 21386225 ~ 21398047 (+) |
| G24311 | NA | non-coding | upstream | 922249 | 20880546 ~ 20880924 (+) |
| G24310 | NA | non-coding | upstream | 926388 | 20876584 ~ 20876785 (+) |
| G24256 | NA | non-coding | upstream | 1309168 | 20492904 ~ 20494005 (+) |
| G24258 | NA | non-coding | upstream | 1310556 | 20492396 ~ 20492617 (+) |
| G24570 | NA | non-coding | downstream | 337782 | 22144839 ~ 22148238 (+) |
| G24654 | NA | non-coding | downstream | 533679 | 22340736 ~ 22343616 (+) |
| G24692 | NA | non-coding | downstream | 643050 | 22450107 ~ 22450404 (+) |
| G24693 | NA | non-coding | downstream | 646759 | 22453816 ~ 22454055 (+) |
| G24695 | NA | non-coding | downstream | 648209 | 22455266 ~ 22456761 (+) |
| AMCG00007514 | arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 | other | upstream | 736390 | 21060159 ~ 21066783 (+) |
| AMCG00007483 | NA | other | upstream | 1851745 | 19939170 ~ 19951428 (+) |
| G23893 | eif3j,eif3ja,LOC107688938,LOC107712512 | other | upstream | 2747040 | 19050977 ~ 19056133 (+) |
| AMCG00007452 | NA | other | upstream | 2788274 | 19007550 ~ 19014899 (+) |
| AMCG00007433 | NA | other | upstream | 3232701 | 18567242 ~ 18570472 (+) |
| AMCG00007547 | clg23h15orf48,clg1h15orf48,c13h15orf48 | other | downstream | 324516 | 22131573 ~ 22134714 (+) |
| AMCG00007554 | cdc42se2,LOC107710816,LOC107577486 | other | downstream | 382188 | 22189245 ~ 22203951 (+) |
| AMCG00007553 | NA | other | downstream | 456463 | 22263520 ~ 22266409 (+) |
| G24606 | NA | other | downstream | 474643 | 22281700 ~ 22282958 (+) |
| AMCG00007585 | star5,stard5,LOC104953929 | other | downstream | 1326754 | 23133811 ~ 23139521 (+) |
