AMCG00007536 (fgf7)


Basic Information

Item Value
gene id AMCG00007536
gene name fgf7
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22033242 ~ 22033908 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007536
ATGAAGATGATTGCTAAGGAACGGACGATCTTGTTGTTCATTGCAGGTATTCTGGAAATCAGGACAGTCTCGGAGGGAAGTGTGCTGGCAATTAAAGGAGTGAAAAGCCAATACTATGTGGCAATGAACAAGACTGGAAAACTATATGGCAAGAAAATCTACAACGAGGACTGCAACTTCAAGGAGGTTTTCCTAGAAAACTATTTCAATGCATACTCCTctgcaaaatggaaaaataatggcAAAGACATGTTTATTGCCTTATCTCAGAAAGGTACCCCAGTCAGAGGAAAAAGGACAAAGAAGGAGAATATAGCATCACATTTCATACCCATGAAGtgcagagaggaagagaagaaagtGGATTAA

Function

symbol description
fgf7 Predicted to enable growth factor activity and type 2 fibroblast growth factor receptor binding activity. Predicted to be involved in several processes, including animal organ development; fibroblast growth factor receptor signaling pathway; and positive regulation of macromolecule metabolic process. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and extracellular space. Orthologous to human FGF7 (fibroblast growth factor 7).

NR:

description
PREDICTED: fibroblast growth factor 7

GO:

id name namespace
GO:0008543 fibroblast growth factor receptor signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005104 fibroblast growth factor receptor binding molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007536 True 369 mRNA 0.40 2 22033242 22033908

Neighbor

gene id symbol gene type direction distance location
AMCG00007538 NA coding upstream 25621 21984244 ~ 22007621 (+)
AMCG00007532 dut coding upstream 226185 21803173 ~ 21807057 (+)
AMCG00007534 NA coding upstream 232590 21781383 ~ 21800652 (+)
AMCG00007533 LOC108412301 coding upstream 273059 21755790 ~ 21760183 (+)
AMCG00007531 sema6d,LOC107557846 coding upstream 315216 21699051 ~ 21718026 (+)
AMCG00007537 NA coding downstream 16373 22050281 ~ 22052621 (+)
AMCG00007548 NA coding downstream 89739 22123647 ~ 22129477 (+)
AMCG00007546 bloc1s6 coding downstream 119769 22153677 ~ 22158549 (+)
AMCG00007549 sqrdl,LOC102778185,LOC103363827 coding downstream 128296 22162204 ~ 22174755 (+)
AMCG00007555 NA coding downstream 170868 22204776 ~ 22216240 (+)
G24384 NA non-coding upstream 635195 21386225 ~ 21398047 (+)
G24311 NA non-coding upstream 1152318 20880546 ~ 20880924 (+)
G24310 NA non-coding upstream 1156457 20876584 ~ 20876785 (+)
G24256 NA non-coding upstream 1539237 20492904 ~ 20494005 (+)
G24258 NA non-coding upstream 1540625 20492396 ~ 20492617 (+)
G24570 NA non-coding downstream 110931 22144839 ~ 22148238 (+)
G24654 NA non-coding downstream 306828 22340736 ~ 22343616 (+)
G24692 NA non-coding downstream 416199 22450107 ~ 22450404 (+)
G24693 NA non-coding downstream 419908 22453816 ~ 22454055 (+)
G24695 NA non-coding downstream 421358 22455266 ~ 22456761 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other upstream 966459 21060159 ~ 21066783 (+)
AMCG00007483 NA other upstream 2081814 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 2977109 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 3018343 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 3462770 18567242 ~ 18570472 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 97665 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 155337 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 229612 22263520 ~ 22266409 (+)
G24606 NA other downstream 247792 22281700 ~ 22282958 (+)
AMCG00007585 star5,stard5,LOC104953929 other downstream 1099903 23133811 ~ 23139521 (+)

Expression


Co-expression Network