AMCG00007537


Basic Information

Item Value
gene id AMCG00007537
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22050281 ~ 22052621 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007537
ATGGCGTCTAAGCCCGCTGATGCCGGAGATTTAACGAAATGTGCTGATGTGTGCAGTCGGGAGAAATTGACGTGTTTGATCGCTCCGGATAGTCGGACCCGGGCAAAGGCACGGTGTGATGCCGCCGCGGAGCCTCTGCAGGGCCTGAAGTTGGCATCCCACGCAGTGCTGCACCGCGCACAGCTGAGAGGCAGATTGAAATGCGGTAAATGCAGCGGTTCAAGGATGTTCTATTGCTACACGTGTTTCTCTTTAGTAGGTGTGAGTCAGGAGGAAATCCCCCAAATCAAGcttcCTCTGAAGATTGATATTATCAAACACCCAAACGAAACGGACGGCAAGAGCACTGCAGTGCATGCTAAACTCATAGCCCCAGATGACGTTACCATCTACACTTACCCTTGCATCCCTGATTATGAGgatgaaaaacacaaaGTTGCATTAGTTTTCCCAGGTCCAGGTTCACTAACGATTGAAGAGTTAACAGAACAGCTTGTAGCCGCTGCAAAGAGAGCTCGGGATACCTCAACAGATGAGCCAGCAGTGAAGAGAATGAAGTGTGAGAGCAAGCCAGAAGATGGAAAATCATCTTCAAACCAACCAACTGAGCAGGAGAAAAGCAGTCCGTTAAAGAGAATATTGTTTATCGATAGCACTTGGAACCAGACAAACAAAATTATCACTGATGAACGGCTTCAAGCCTTGCCTCAGGTTGAACTGAAAACCAGGAAGACCTGTTTCTGGCGTCACCAGAAGGGAACTCCGGACACTTACCTCTCCACAATAGAGGCCATCTACTATTTCCTGAGAGACTATACTGAACTGTGTTTATCTCCAGAGTACCTGGGAGAGTATGACAATCTGCTCTTCTTCTACTCATTCTTGTACAAGCTGATCAACAAAGCAAAGCACACTGCTGGGAAACTGTGA

Function

GO: NA

KEGG:

id description
K25070 DTWD1; tRNA-uridine aminocarboxypropyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007537 True 930 mRNA 0.48 4 22050281 22052621

Neighbor

gene id symbol gene type direction distance location
AMCG00007536 fgf7 coding upstream 16373 22033242 ~ 22033908 (+)
AMCG00007538 NA coding upstream 42660 21984244 ~ 22007621 (+)
AMCG00007532 dut coding upstream 243224 21803173 ~ 21807057 (+)
AMCG00007534 NA coding upstream 249629 21781383 ~ 21800652 (+)
AMCG00007533 LOC108412301 coding upstream 290098 21755790 ~ 21760183 (+)
AMCG00007548 NA coding downstream 71026 22123647 ~ 22129477 (+)
AMCG00007546 bloc1s6 coding downstream 101056 22153677 ~ 22158549 (+)
AMCG00007549 sqrdl,LOC102778185,LOC103363827 coding downstream 109583 22162204 ~ 22174755 (+)
AMCG00007555 NA coding downstream 152155 22204776 ~ 22216240 (+)
AMCG00007557 trpm7 coding downstream 179906 22232527 ~ 22261853 (+)
G24384 NA non-coding upstream 652234 21386225 ~ 21398047 (+)
G24311 NA non-coding upstream 1169357 20880546 ~ 20880924 (+)
G24310 NA non-coding upstream 1173496 20876584 ~ 20876785 (+)
G24256 NA non-coding upstream 1556276 20492904 ~ 20494005 (+)
G24258 NA non-coding upstream 1557664 20492396 ~ 20492617 (+)
G24570 NA non-coding downstream 92218 22144839 ~ 22148238 (+)
G24654 NA non-coding downstream 288115 22340736 ~ 22343616 (+)
G24692 NA non-coding downstream 397486 22450107 ~ 22450404 (+)
G24693 NA non-coding downstream 401195 22453816 ~ 22454055 (+)
G24695 NA non-coding downstream 402645 22455266 ~ 22456761 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other upstream 983498 21060159 ~ 21066783 (+)
AMCG00007483 NA other upstream 2098853 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 2994148 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 3035382 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 3479809 18567242 ~ 18570472 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 78952 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 136624 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 210899 22263520 ~ 22266409 (+)
G24606 NA other downstream 229079 22281700 ~ 22282958 (+)
AMCG00007585 star5,stard5,LOC104953929 other downstream 1081190 23133811 ~ 23139521 (+)

Expression


Co-expression Network