AMCG00007542


Basic Information

Item Value
gene id AMCG00007542
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22042455 ~ 22048365 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007542
GTTGACTGGCCAATTGCCCTTAATGAGAGCGTCCAGTTAAGAAAACAGTTGGATGGTTACAGTTCACCTGATGACATAGCTGACCGTCTCCATAAGGAAGCCCCAATGGAAACGGGGATCATCATTTCTTTGGAGCAACGGGTTGAAGTGTTATCCTCCCAAGTTGAAAACCATGCTGCTAAAATCCTGAGCTGTCAAACAACACCATTGAGGACTGACGACCAGCCTGCTGGGGTATCGCCTCAGCGtcattttaaggtTTCTGAAAAAGACACGGAGAAATCTCAGAAAAAAGGATTTACACTGAATGAATGGGCAGACTTGCCTGGACAACTTGATGCTTTACTCctgatgaactgcatttcagaaaaccaaaattatacaGCATCAGTGGCAGTCTTTAAGGATGCCTTTTGGTGGTTTTATCTACATACATTTAAGCCTAATCAAGAAGATGAAGACCGGCTTTTTGATCGAATTGCTGAAAGCTTTGTGGCACTCTTAATAACTGTGGAATTGGATGTGAAAGACAGGTTGTTTAAGGTCTACGCAGACTGCTTAACACAGGCAGTATATTCTGTGTTCTATGAAGCTTTTCCAGAGTCTCGAGATTGTATTGATGAACagtttaaaactgaattaactgACCTGATCTCTCATTGGGTTACAGgaatGAAGCCTTTTCCCTTTACATGGAAGAAATGGAAACTAAATTGGTTGTGTCAGTTAGCGAATGGAGCCtcagagatggaaaaagaaTATAAGACCTTCTCAGCTGTGAAT

Function

GO:

id name namespace
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007542 True 783 mRNA 0.42 7 22042455 22048365

Neighbor

gene id symbol gene type direction distance location
AMCG00007541 cops2,LOC107557994,LOC107589327 coding downstream 60534 21976293 ~ 21981921 (-)
AMCG00007539 LOC106587774 coding downstream 68597 21952685 ~ 21973858 (-)
AMCG00007540 NA coding downstream 99530 21925949 ~ 21942925 (-)
AMCG00007544 NA coding downstream 123677 21898367 ~ 21918778 (-)
AMCG00007545 fbn1 coding downstream 162152 21811480 ~ 21880303 (-)
AMCG00007543 nnt2,LOC108412674,LOC107381730,LOC103379093,LOC106934392,LOC102222601 coding upstream 1388 22049753 ~ 22068693 (-)
AMCG00007551 atp8b4,LOC107688930,LOC107712521 coding upstream 21277 22069642 ~ 22118102 (-)
AMCG00007550 NA coding upstream 96384 22144749 ~ 22153500 (-)
AMCG00007552 LOC100693649,LOC108251187,LOC102204817,LOC101075467,LOC105022653 coding upstream 129101 22177466 ~ 22181121 (-)
AMCG00007558 usp8,LOC102785891 coding upstream 227746 22276111 ~ 22288236 (-)
G24551 NA non-coding downstream 33022 22005734 ~ 22009433 (-)
G24515 NA non-coding downstream 98784 21942952 ~ 21943671 (-)
G24503 NA non-coding downstream 235394 21806120 ~ 21807061 (-)
G24470 NA non-coding downstream 284286 21757887 ~ 21758169 (-)
G24469 NA non-coding downstream 286509 21755591 ~ 21755946 (-)
G24579 NA non-coding upstream 83024 22131389 ~ 22133981 (-)
G24640 NA non-coding upstream 212482 22260847 ~ 22262493 (-)
G24687 NA non-coding upstream 383702 22432067 ~ 22432313 (-)
G24705 LOC105889120 non-coding upstream 398005 22446370 ~ 22448954 (-)
G24721 NA non-coding upstream 470057 22518422 ~ 22521084 (-)
AMCG00007500 NA other downstream 1569536 20462504 ~ 20472919 (-)
G24217 NA other downstream 1710644 20331513 ~ 20331811 (-)
AMCG00007494 NA other downstream 1820451 20171329 ~ 20222004 (-)
AMCG00007487 NA other downstream 2119302 19915146 ~ 19923153 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 2242703 19791701 ~ 19799752 (-)
AMCG00007565 gatm other upstream 292234 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 513131 22561496 ~ 22576454 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other upstream 1358563 23406928 ~ 23420303 (-)
G25026 NA other upstream 1923306 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 2214325 24262690 ~ 24281564 (-)

Expression


Co-expression Network