AMCG00007545 (fbn1)


Basic Information

Item Value
gene id AMCG00007545
gene name fbn1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 21811480 ~ 21880303 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007545
ATGTGGCCGGGCAGGCTGCTCCAGCTGGCCGTGGGCTGCGCGGCGCTGCTGGGGCTGTGCGTCGGCGCGGCGCGGGACGGCGAGGACGAGGCGCCGGGGGAGCCGCGGGCGAGCCGCGCGAAGCGGCGTGGAGCCGCGCAGGACGCGCTGAAGGGACCCAATGTTTGTGGATCACGTTTCAATGCATACTGCTGCCCTGGATGGAAAACCCTTTCTGGAGGAAACCAGTGCATTGTCCCAATCTGCAGAAGCTCATGTGGAGATGGATTTTGCTCCAGACCCAATTTGTGCACGTGCCCAAATGGCCAGACTGCAAGTTCCTGTGGCTCAAAATCAGTTCAACACTGCAACATCAGATGCATGAATGGCGGATCCTGTGCCGAAGATCAGTGTAACTGTCAGAAGGGCTACTCGGGGGCTCACTGCGGGCAGCCGGTCTGTGAGAATGGGTGCCTGAATGGAGGGAGGTGCGTGGCTCCAAATCGCTGTGCCTGCACTTACGGGTTCACTGGCACTCAGTGTGAAAGAGATTACAGGACTGGGCCATGTTACTCTTCTGTGAGCAACCAGATGTGCCAGGGGCAGCTGACTGGCATAGTGTGCACCAAGACCCTGTGCTGTGCGACTGTTGGCAGAGCATGGGGGCACCCCTGTGAGATGTGTCCTGCGCAGCCCCATCCCTGCCGCCGGGGATTCATTCCAAACATCCGAACGGGAGCTTGTCAAGatgTGGATGAATGCCAGGCTATTCCTGGACTCTGTCAGGGGGGAAATTGCATTAACACTGTTGGATCCTTTGAATGCAAGTGCCCTGCTGGACACAGGTTCAACGAAGTATCGCAGAAATGTGAAGACATCGATGAGTGTATTACTATCCCCGGCATTTGCAATGGAGGAGAATGTTCGAACACAATCGGAAGCTATTTCTGCAAGTGTCCTCAGGGATATTACACTCCTATTGACGGCTCCAGATGCATAGATGGCCGAGCTGGATACTGCTTCTCAAGTTTGGTGAACGGCCGCTGTGCCAACCAAATCTCCCAGCTCCTAACCAAAGTGCAGTGCTGCTGTGACAGTGGACGCTGTTGGTCTGATGGATCTTCTCCAGAAATGTGCCCTATGCGTGGAACTGCTATTCTTCCACAAACATACATCACAGATATGTGTCAGCGGTATCTGAATCTGTGCATCAACGGTCGCTGTATTGCTGTTCCTGGAAGCTATCGCTGCGAGTGCAACATGGGGTTTAAACTGGATGTCCGGGGAGAATGCATTGatgATGATGAATGTGAACGAAACCCCTGCATCCATGGTGATTGTGTCAACACTCAGGGATCATATTTCTGTCAGTGTCCAGCTGGCTTTCAGAGCACTGCCACAAGAACCGAGTGCCGAGATCTCGATGAGTGTGTGGCAAATGGACGGATTTGCAACAATGGACGCTGTGTCAACACTGAAGGCAGCTTCCACTGTGTCTGCAATGCTGGCTTTGAGGTTTCGCCTGATGGGAGAAATTGTCAAGATCAAGATGAATGCTTGATCAGAAATATGTGCCTTAATGGGATGTGCATAAATGAAGATGGgagttttaaatgcatctgcaaACCTGGGTTCCTGTTGGATCCTACCGGACGCTTCTGCGTAGACATCGATGAGTGTGAGACTTCGGGGATGTGCATGAATGGGCACTGCGTGAACACTGAGGGCTCCTTCCGTTGTGACTGCCTGCCCGGATTGGCTGTGGGGCTGGATGGGCGTGTCTGTGTTGACACACATATGCGTAGCACATGTTACGGAGGGTACAAAAGAGGACAGTGTATAAAACCTTTCTTTGGAGCCCTTACCAAGTCAGAGTGTTGCTGTGCCAATATTGAGTATGCTTTCGGAGAACCCTGTCAGCCCTGCCCACCATTGAATTCAGctgAATTCTCTGCTCTTTGCAGTAAAGGTGTGGGCACTACTTCTGATGGAAGAGATATAAATGAATGTGCATTGGATCCAGATATCTGTCAAAATGGAATTTGTGAGAACTTGCTTAGAACCTATAAGTGCAACTGCAACGAAGGCTTTGAAGTGGACATCACTGGCAAAAACTGTTATGACATTGATGAATGTGCCATTAACAGACGCCTATGTGAGAATGGGGAGTGCAGAAACACACCTGGGAGTTTCACCTGCAGCTGTCCGAAGGGATACGTGTTTCTGCCCGAAACCGATGTCTGTAACGATATCGACGAGTGTTTGTCCAGCCCCTGTGTTAATGGAGACTGTAAGAACAGCCCCGGGTCCTTTTTGTGCGTGTGTCCTACAGGCAGCACTCTGGACACCTCAGGGACTCTGTGTGTTGAAACGGGGAAAGGAACATGCTGGCTGAAGGCAATTAATGGCCAATGTGAAATAAACATCAACGGGGCAACACTCAAGTCTCACTGCTGTGCAACAATGGGAGCAGCTTGGGGCAGCCCTTGTACCAAATGTGAACCAGATCCTATTTGTTCTAAAGGCTATGCCAGGGTTAGAGGGACAATTTGTGAAGATGTGAATGAGTGTGAAGTGTTTCCTGGCGTTTGCATCAACGGAAAGTGTGTAAATACAGTGGGATCTTTTATTTGCCAGTGCCCCACTGGGATGACTGTGGATGCCACTGGTAGAACATGCATTGATCTGCGTATGGAATCGTGCTATCTGACCCACGAGGATGAGAGGTGCACCGCTCCCATACCTGGGAAACACCGCGTGGACGCCTGCTGCTGCTCCGTTGGCGCTGCCTGGGGCCCGGAGTGTGATGAATGCCCTGAGAAAGGCAGCTCTGAATTCAGCCAACTTTGTCCTCGAGGCCCGGGCTTCTCCCACAGGGGGGACTTTATCAATGGGAGGCCTTTTTTGAAAGacATCAACGAGTGCAAAATGATCCACAGTCTGTGCGCCAATGGTAAATGCAGAAACACTATTGGCAGTTTCAGATGCAAGTGTGATAGTGGTTTTGCACTTGACTCAGAGGAAAGGAATTGCACTGATATTGATGAGTGCCGGATATCTCTGGATATCTGTGGTCAGGGAACCTGTGTCAACACACCGGGAGACTTTGAGTGTGAATGCTTTGAAGGCTATGAGAGTGGCTTTATGATGATGAAAAACTGCATGGacaTCGACGAGTGCGAGAGGAATCCATTGCTGTGCCGCGGTGGTGATTGTGTCAACACAGAGGGCAGTTTCCGCTGCCTTTGCCCCCAGGGCCACGAGGTCGCGACTGATGGCTCTGCTTGTTTAGATATTAACGAGTGCGAATTGAGCGATAAGCTGTGCAAGAACGGCCGATGCGTGAACCTGATTGGTCGGTATCAATGCTCCTGTAACACGGGTTATAAATCCACGGAGGACAGGCTATCATGCGTTGACATTGATGAATGTACCATTGAGAACGGAGAGTGCGAAAATTTCTGTACAAACTCTGAAGGCAGTTATGAATGCAGCTGTAAGACTGGCTTTGCCCTGATGCCGGATCAAAGAAGCTGTACAGATGTTGATGAGTGTGAACTCAATCCAAATATCTGCCTGAGTGGGAACTGTGAGAACACAAAGGGCTCTTTCATCTGCCACTGTGACCTTGGCTATTCGGTGAGGAAGGGAAGCACTGGTTGCACAGATATAAACGAATGTGAGATTGGGGCTCATAACTGTGACAGGCATGCTACCTGTACCAACACTGCTGGTAGCTTTAAGTGTAGCTGTGGTCCGGGATGGATTGGTAATGGGGTCAAATGTACAGATTTGGATGAATGCTCTAATGGCACTCACATGTGCAGCAACAATGCCGAGTGCAGGAACACGATGGGCTCCTACCGCTGCCTCTGCAAGAAGGGCTTCACTGGAGACGGTTTCTTCTGTACAGACAGCGACGAATGTGCCGAGAATGTAAACCTGTGTGAGAATGGACACTGCCTGAATGTTCCCGGGGGATATCGGTGCGAGTGTGACATGGGCTTCATACCCACCGTGGATGGAAAGGCCTGTGAAGATATCGATGAGTGTTCATTCCCCGATATATGTGTCCACGGGAGGTGCCGAAATATTCCTGGCCTCTTCAGGTGTGAATGCCATACCGGATATGAACTTGACCGCAGTGGAGGCAACTGCACAGATATCAACGAGTGCGCTGATCCAACGACTTGCATCAGTGGAATTTGTGTTAACACTCCTGGCAGCCACATCTGCAACTGTCCTCCAGACTTCGAGCTCAACCCAACCCGAGTTGGCTGCGTCGATACACGCTCCGGTAACTGCTACCTGGATGTGCGTTCCCGTGGTGATGCGTCAGAGAGCCTGGACTGCTCCAGTGAGATCGGAGTGGGCGTGTCCAAagcctcctgctgctgctccctgGGACGAGCCTGGGGCAACCCCTGTGAAGCCTGCCCCCCGGTCAACTCCTCTGATTATAAGACTCTGTGTCCCGGCGGAGAAGGCTTTCGACCTAATCCCATCACAGTTATTCTGGAAGATATCAATGAATGTCAGGAACTACCAGGACTTTGCCAAGGAGGAAATTGTATTAACACATTTGGGAGCTTCCAGTGTGAATGTCCGAAGGGTTTTGAACTAAATGAAGACACAAGGGTCTGTGAGGatgtGAATGAATGTGAGAGACCTGGAATCTGTGGTCCTGGACAGTGTTATAACACTATAGGAAATTATACTTGCATTTGCCCTCCAGACTACATGCAGGTGAACGGTGGAAACAACTGCATGGATATGAGGAGGAGTCTGTGCTACAGGAATTATTACTCTGATAATGGCTCTTGTGATGGGGAGCTGCCTTTCAACATGACAAAGAAGATGTGTTGCTGCTCGTACAATATTGGAAGGGCCTGGAACAAACCATGTGAACAGTGTCCCATACCAAGCACCAACGAGTTTGCCATCCTGTGTGGCAGTGAGAGACCAGGATACATCATTGATATTTACACTGGACAGCCTATTGACATTGATGAGTGTAGAGATATCCCAGGTTTGTGCGAGAACGaCATCGATGAATGCCAGAATGGACCAGTTTGTCAACAAAACGCTGACTGTGTGAACCTGCCAGGGGGTTATCGCTGTGAATGCAGACCAGGCTACCGGTCCACTCCTACAGGGCAGTGTCTCGATCGCAATGAATGTTTTGAAAATCCCACTATATGTAGCCATGGGCAGTGTATTGACACAGTTGGAAGCTATCACTGCATCtgccacaatggatttaaagcAACTCCAGATTCATCCATGTGCATTGATGTTGATGAGTGTGAAAGACAACCATGTGGAAATGGAACCTGTAAAAACACGGTTGGCTCTTACAACTGTCTGTGTTACCCTGGCTTCCAGCTGTCTCACAATGATGACTGCATAGATACGGATGAGTGCTCCACTCAGAGGGGTCTCTGCAGGAATGGCGACTGTTTCAATACTGTAGGATCCTTCCGATGTGTGTGTCGTGATGGCTATGAGCTCACTCCTGATAACAGGATTTGCATTGATATCAATGAGTGCGCTGTGAACCCTGGAAGATGTGGCCCTGGCACCTGTCAGAATTTAGATGGCAGCTACAGGTGTATCTGCCCCTCTGGTTACTACTTAAAAGATGAGACATGTGAAGATATTGATGAATGTGCACAGAGCCCAGATATCTGTACTTTTGGCACCTGTTCCAATACTGTGGGGAGTTTCAAGTGCCTGTGTCCTGAAGGTTTTGAGCTCTCTTCTTCTGGGAGACGGTGTCTTGATGTTCGAAAAAGCTACTGCTTTTCCAAGTTTGAGAATAGGAGGTGCGTTGCTCCCCTGCCTGAAAACACAACCAAGGGAATCTGTTGCTGCAGTGCCATGCCAGGCCAGGGCTGGGGTGACCCCTGTGAGATCTGTCCCACAAAGGACCAGAATATCGATGAGTGCGCCACGAGTCCAGACATCTGTAAGAATGGGCAGTGCATTAACACAGATGGCTCATTCCGATGTGAATGTCCTTTTGGTTTTCGAGTGGATTATTCTGGTATAAACTGTGCAGATATCAATGAGTGTGAACTGGGCAATCCTTGTGGTAATGGGACATGTACAAATGTTATTGGAGCTTTTGAATGTACATGTGATGACGGCTTTGAGCCAGGACCCATGATGACCTGTGAAGATGTGAACGAATGTTCTCAGAACCCCCTGCTGTGTGCCTTCCGCTGCGTCAACACGGTCGGATCCTACGAGTGTAAATGCCCCAGCGGGTATGTCCTCAGAGAAGACCGGAGAATGTGCAGAGaCCAAAACGAGTGTGAAGACGGTATTGATGACTGTGAAACAAGAGGGATGTTGTGCAAGAATCTGATCGGCACCTACATGTGTATCTGCCCTCCAGGTTATGTGCGTCAACCTAATGGAGAAGGTTGCATGGATTTGAATGAATGTTCTGCTAAACCAGGCATCTGTGAGAACGGTCGTTGTGTGAACGTAGTGGGCAGCTACGAATGTGCTTGTCATGAAGGATTTACAGTGAGCTCCAGGAAGACTGATTGCATTGACAACCGTCAGGGCTTCTGCTTCACGGAGGTGCTGCAGAGCCTGTGCCAGATGACGTCCAGCAGCCGGAACCTGGTGACCAAGTCTGAGTGCTGCTGCGATGGGGGCCGGGGCTGGGGGTCCAGCTGCGAGATCTGTCCCCTGCCTGGAACCACTCAGTACAAGAAAATGTGTCCCCTTGGTCCTGGATACACCACTGATGGGAGAGACATCGATGAATGCCACGTGATTGGGGGTCTGTGTCGAAACGGGCAGTGTGTGAACAATATTGGTTCCTATGGCTGTATTTGCAAACCTGGATATACCACTGATATCACTGGGACAACATGTGTGGATATTGATGAATGCGTTCAGTCACCAAAACCATGCAATTTCATCTGTAAAAACAGTGAAGGAGGGTACCTATGTTCCTGTCCAAGGGGCTACATTCTACAGGAAGATGGCAAGAGTTGTAAAgACCTTGACGAGTGCTCCACTAAACAGCACAACTGCCAGTTTCTGTGCGTCAACACCATCGGTGGGTTCACCTGCAAGTGTCCCCCTGGCTTCACCCAGCACCACATGGCCTGCATTGATAAGAACGAATGTGCCACAGACCCAGGGCTGTGTGGAGCTAAAGGAGTTTGTCAGAATACTCCAGGGAGCTTCAGCTGTGAGTGTCAGCGTGGATACTTACTGGACCAGAGTGCACAAAACTGTGAAGACGTCAATGAGTGTGATGGGAGCCACCGATGCCAGTACGGCTGTCAGAACCTGGTTGGAGGATACAGGTGCAGCTGCCCACAAGGTTACCTTCAGCACTACCAGTGGAATCAGTGTGTGGATGAAAACGAATGCATGAACAGTCAGATTTGTGGCGGGGCTTCATGCCACAACACACTCGGGAGCTTCCGATGCCTCTGTCCTACAGGGTTTCAGTACGAGCAGTTCAGCGGAGGCTGCCAGGACATCAACGAGTGCACTTCCTCTCAAAACCCCTGTAACTATGGCTGCTCCAACACTGATGGTGGCTACACCTGCGGATGCCCTGCTGGTTACTACAGAGCAGGACAAGGGCACTGTGTATCTGGGGTTGGATTTGGACATGGAGGCCAGGGGCTGGCTGTAGGCGGAGACACCGATGACAACACTCTCTCGCCCGAGGCCTGTTATGAATGTAAAATCAATGGTTATCCAAAGAAGGGCAGGAGACGCAGAAGCACAAATGGAACTGAAGATGAAGTCCTCACTGACTCACAGAATGAACAAGAGTCCATCAGCCTGGCCAGTGTGGATATTGAGGACACTCTCATATTCAGCTTCAACATCACTGACCTGAACAGCAAAGATCACATCCTGGATTTCATTCCGGCTCTCAACACTCTGAACAACCACATTCGCTACATGATCGACTTTGGCAACGATGAAGGTTTCTTCAAAATCAACCAGAAGGAAGGAATAAGTTTTCTCCATCtaaccaaaaagaaaatggttCCTGGAACCTATTCTTTACAAATCAGCAGTATCCCACTGTACAAAAAGAAGGAACTGGCTCATCTGCAAGACAAGTATGACAAAGACTACCTCACAGGGGAGCTGGGAGACACGTTGAAAATGAAAGTGCAAATTGTTCTTCATTAACTGCACGTGAAGGCAATGCCATCGCTTATGCCAAAGAAAAAGGATGGACTGCATTGTTGATTCCCAGGCAGATTCTACATATCATGGATACAGtatcttattattttacagtatgcaAAAGTACTGCTACATgtccagaaaacaaaagaaaaaacacaggatgCAAATCCTTAGCAAAATCAACCACTTTCTCAggctttttataaataaagctaATCTTGTGTAATAAGGTTTTGTATAATGATATGTTGAATCTTGATACACTAACTGGGACATTTGAGTTGCTAGAAGGCACTGCTGCTGAGACTTTTCATCATTCAGCAGAAGTTGAAGATTTTGCTCTGTCTTGAAGGACTTTTTATTGTAACTTTTGCTTCTCCATTTTTTTCAACTGAATAGATCAGCAGTTTATTATATTAACTGGTGCTAGTTACATGACATCCTAGATTTATGAATGCActgtaatattttacaaacttGGTAGCCATAAATGCAATTTCTACTCAGTCTAAAGATTTCCATTACTTTGCAACCAACCAAAGTTAGCTCAATAGCTTTTTCTCAGTTATATCTATACTACATGTAAATtaagtgtgtgtatactgtaatCATGCTACTTTTTTAATCATGGAAGCATTTGTAAACTAGATTTATAAGCCCTGTATGGAAGGGTTTTATAATGGTGCTTATAAAGACCAACTacttctttttaattgtatacacCATTCTGATGATGCAATATCTGTGACTTAATAATTATGCACTGAGGCCAGCAGAGCCACTCATGTTCTCCACAGTCATATGACAATCAGTGCTGTCACCCAAAGTGACATTAATGAAAACATCTTCAGTACCAGTGTCTGTTCACATCAATGAGGGTTTAGTTTCAGtaaattcacaataaaaacatatttttggttTAAA

Function

symbol description
fbn1 Human ortholog(s) of this gene implicated in several diseases, including CREST syndrome; Weill-Marchesani syndrome; aortic disease (multiple); autosomal dominant isolated ectopia lentis 1; and bone disease (multiple). Orthologous to human FBN1 (fibrillin 1).

NR:

description
PREDICTED: fibrillin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007545 True 9084 mRNA 0.48 62 21811480 21880303

Neighbor

gene id symbol gene type direction distance location
AMCG00007535 myef2 coding downstream 42057 21760668 ~ 21769423 (-)
AMCG00007530 dmxl2,LOC107700583 coding downstream 358063 21424933 ~ 21453417 (-)
AMCG00007529 NA coding downstream 408940 21397686 ~ 21402540 (-)
AMCG00007527 tnfaip8l3,LOC107746937,LOC107588557,LOC107700582 coding downstream 454479 21354520 ~ 21357001 (-)
AMCG00007526 NA coding downstream 476090 21322232 ~ 21335390 (-)
AMCG00007544 NA coding upstream 18064 21898367 ~ 21918778 (-)
AMCG00007540 NA coding upstream 45646 21925949 ~ 21942925 (-)
AMCG00007539 LOC106587774 coding upstream 72382 21952685 ~ 21973858 (-)
AMCG00007541 cops2,LOC107557994,LOC107589327 coding upstream 95990 21976293 ~ 21981921 (-)
AMCG00007542 NA coding upstream 162152 22042455 ~ 22048365 (-)
G24503 NA non-coding downstream 4419 21806120 ~ 21807061 (-)
G24470 NA non-coding downstream 53311 21757887 ~ 21758169 (-)
G24469 NA non-coding downstream 55534 21755591 ~ 21755946 (-)
G24464 NA non-coding downstream 93441 21711522 ~ 21718039 (-)
G24430 NA non-coding downstream 436448 21296378 ~ 21375032 (-)
G24515 NA non-coding upstream 62649 21942952 ~ 21943671 (-)
G24551 NA non-coding upstream 125431 22005734 ~ 22009433 (-)
G24579 NA non-coding upstream 251086 22131389 ~ 22133981 (-)
G24640 NA non-coding upstream 380544 22260847 ~ 22262493 (-)
G24687 NA non-coding upstream 551764 22432067 ~ 22432313 (-)
AMCG00007500 NA other downstream 1338561 20462504 ~ 20472919 (-)
G24217 NA other downstream 1479669 20331513 ~ 20331811 (-)
AMCG00007494 NA other downstream 1589476 20171329 ~ 20222004 (-)
AMCG00007487 NA other downstream 1888327 19915146 ~ 19923153 (-)
AMCG00007481 fam63b,LOC107750498 other downstream 2011728 19791701 ~ 19799752 (-)
AMCG00007565 gatm other upstream 460296 22340599 ~ 22358446 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other upstream 681193 22561496 ~ 22576454 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other upstream 1526625 23406928 ~ 23420303 (-)
G25026 NA other upstream 2091368 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 2382387 24262690 ~ 24281564 (-)

Expression


Co-expression Network