AMCG00007570


Basic Information

Item Value
gene id AMCG00007570
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22536885 ~ 22549409 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007570
AGAACCCCTTCTCTCCGCCGCAAGTGGAGAAAACGGTATGGAGGCCTGGATGGCAATAAATTACTAGAGCCAAATGAGGAGGAGGATATTAAAGCAGCTTCAGTGTACATCAGCAATGGGAACCAAAAGTCTTTAACTCCCCATGGAGAGCAAATGCGATGTAACAGCCCCTTCTGGCATGGTATCAGCAGGCTTGACTCTCCACAGGCTCACACAAGAAAGAAAGTGGCTGCTGATGTCCTCTTTGAGAGTTTTGCATCTGAGGGAAGGGTACGCATGGCACAGTTTTTCGAGACCATTTGGAGCTCTGGAATTCGAAAGTCTGACCCCAGGATTAAGGACTGTTACTTACTCATGAGGAAGCTGCAGGAGGCCGATGGCACTGTGGACAGGAACACCTTTCACAGGTGTGTGACTGGCTTTGTGTCGTTCATTCTGAAAGCACTGCAGGGAAGGTTTGTCATTCCAGATTTCACCACATTCACTGAAGAAACACAGAAGCTTTTCATGAAGTGCAAGCAGCTTGCATCTTTCAAGCTGGAGCAAGATGCTGCAACCGACAACAGCAGGAAATGGGGAGTCTCTATCTGTACAGTGGATGGACAGAGGTTGTCTCTGGGGGACTCTGCAGACCCCTGTATCTTAGGAGAGGCTTCGTGGCCTTTGATTTATGGCATTGCTGTTGATCAATTCAGCGCTGACTACGTACACAGATACGTGGGGATGGAGGAATTTTCAAGATATGAATCACCCTTTATGCTCACTAAAAAAGGTGTTCCCCACAGTCCATTTGTTGAGACAGGAGCTGTTATTACTACATCTTTATTACAGTTAGCTGCAGGACTTGGTGCAGAGGACgaggaaaaatatgaatgcGTTTTGAATATGATTAGAAGACTCTGCAATAAGGAAAATGCCAACCTCAACTGCACAAGTTATCAAAGCCTGAGAAAAGACAGCATCAGACTTCATGCCCTCTCATTTTTTCTCCAAGAAAAGAAAtgttttccaGAGTCTGTAGACATTAGTACCACTTTGGACTTGATGCTACAGTGTTTATCGACAGAAGTCTCGTGTGAATCCGGGGCTGCTATGGCTGCCACATTAGCCAACGGAGGTCTATGTCCCCTGTCAGGTGACCAAGTCCTGAATCCTTCCTCCACCCGGAGCATGCTCTCCATGATGCAGGTGGCCGGAATGAATGACTACTCCAGGACATTCCATTTTAagactTCAGTACCTGCCAAATCCAGCAAATCAGGCACCTTATTAATAGTGGTACCCGGTGTGATGGGTGCTATGTGTTGGTCCCCAGAGCTAGATGCCTATGAAAACTCTTGGAAGTCTGTTCACTTTTGTCAGGAACTGGTATCAGCATTTCAGCTACACAGCTTTGATATAAGGACTCCATTTCGCCAGGTGGTCACATACAGGCAATGGAAAGCAGAATCTGAGGGGTATCAGATAATGAACGTGTTGCTGGCTGCATACAGAGGAGATGTAAGGTCACTACGAAGGTACTTTCTGTCAGGAGCTGATGTACATTCTGTCGACTATGATGGGAGGTCTGCCCTGCATGTTGCCGCCTCGGAGGGACACCTTGAAGTTATAAAGTTCCTTGTTGAAAACGCTGGGGCAGATTTCATGACCCATGACAGtaAGTGGGAGCTGTTGCCGATAACATTCGGCTTCAGCCCAGCGAACTACAGCGGCAAAAAGCCGGCTCTCTCGAATTCCCAAAGTGTCTCTCTCCAGCACAGCGCAGAGTGTATCTACACACAGGAAGACATCACTTATGagtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007570 True 1803 mRNA 0.47 18 22536885 22549409

Neighbor

gene id symbol gene type direction distance location
AMCG00007567 NA coding upstream 16598 22518496 ~ 22520287 (+)
AMCG00007569 NA coding upstream 62484 22463106 ~ 22474401 (+)
AMCG00007563 LOC106587918,LOC106592744,LOC104942123 coding upstream 87931 22441995 ~ 22448954 (+)
AMCG00007562 pde8a,LOC100690151,LOC102210709,LOC105889152,LOC101463592 coding upstream 105040 22408928 ~ 22431845 (+)
AMCG00007561 gatm,LOC106595761 coding upstream 172691 22353612 ~ 22364194 (+)
AMCG00007568 tm6sf1 coding downstream 3281 22552690 ~ 22560767 (+)
AMCG00007575 NA coding downstream 127637 22677046 ~ 22685708 (+)
AMCG00007577 NA coding downstream 141944 22691353 ~ 22697421 (+)
AMCG00007582 NA coding downstream 241484 22790893 ~ 22852795 (+)
AMCG00007583 efl1,LOC102798863 coding downstream 308106 22857515 ~ 22879252 (+)
G24701 NA non-coding upstream 74333 22462124 ~ 22462552 (+)
G24700 NA non-coding upstream 75422 22460469 ~ 22461463 (+)
G24699 NA non-coding upstream 76572 22459884 ~ 22460313 (+)
G24698 NA non-coding upstream 77368 22459020 ~ 22459517 (+)
G24695 NA non-coding upstream 80124 22455266 ~ 22456761 (+)
G24742 NA non-coding downstream 32060 22581469 ~ 22583154 (+)
G24793 NA non-coding downstream 404200 22953609 ~ 22954842 (+)
G24856 NA non-coding downstream 733279 23282688 ~ 23285015 (+)
G24897 NA non-coding downstream 856550 23405959 ~ 23406837 (+)
G24898 NA non-coding downstream 857575 23406984 ~ 23425440 (+)
G24606 NA other upstream 253927 22281700 ~ 22282958 (+)
AMCG00007553 NA other upstream 270476 22263520 ~ 22266409 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other upstream 332934 22189245 ~ 22203951 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other upstream 402171 22131573 ~ 22134714 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other upstream 1470102 21060159 ~ 21066783 (+)
AMCG00007585 star5,stard5,LOC104953929 other downstream 584402 23133811 ~ 23139521 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other downstream 640051 23189460 ~ 23193521 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other downstream 1108441 23657850 ~ 23670079 (+)
AMCG00007631 NA other downstream 1642812 24192221 ~ 24194481 (+)
AMCG00007640 NA other downstream 1927078 24476487 ~ 24499650 (+)

Expression


Co-expression Network