AMCG00007600


Basic Information

Item Value
gene id AMCG00007600
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23652533 ~ 23657431 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007600
ATGCAACACGCAAAGTTAACATTACTGGGCAGTACAGAGAACAGGAAGCTAGATGTATACAGAGGTTTGCTCTCAGGTGAGCCCCTGTGCAAAGGAAGCTATGAAGTGGCATCTTTCATTAACTCAGTTATTGCCGACCACCGGTCCAAGACCTCAGTTAATGTCCCCACTGCCAAGACAACAAACTGTGGGAGAGAGGGAACCCGTGGACTCCAGCTGGTGTCATCACAGACACAGCCAGTCTTCTTACCAGAGCCACACAGTCTGAATGACAGCCAGGAGGAGGTGCTGTGCATTGTGCTGAGTCTGATAGAGATGATGAGCTCCAAACTGCAATCTCAAAGCATCAGAGAAGACACCAAGCATTATTACCAGGAGGTTTTGGCAATTTTGCTGGAAGAAATGGACCTTATGTCAAAACTCGTTTCCTTATTTGGGATCCAGGAGAAGCTACTATCACACTTAGCTGTGAAATGTGTATCATCACTTGTGCTTTTTCAAACTGTCTCCAAAAACTCATTCAGTGATGTCTGGAAACAGACATGCTTACAAACACTGCTGAAGAATCGCCCTGGCAATGAGACGTCTGGGTGTCTGTGGTCTCTTACCTTCGTAATAAAAGGAGTTTTGAAAGGAGAATTTGAGCATGAaaaggagaTATTGGATAATCTTTTCATTGTGCTAGACCCAATACTCAATGACTTGTATTCAAGCATGTTTTCACCAAGAGATGTTAGTCAAGAGCCTCCCTGGTACTCAGAAGACACATCTGACTCCGAAACCAATCTGACCTCTTTCATCAGTTTACTTGAAGTACTCATTACTGCAAGAACGAGGCTTTGCATTTCTGCTTCAAGTCCAAGACTTTTATTCATACAGGCGTCATTAGCCTTGCAGCTAGTAATCTGCCCTGTTCATCACATagtgagaaagaaaatgcttctCCTTCTTAAAAGATGCCTACTTCAAAAGGCTGGGGAAGATTTCTCTCTTGGAGAAGTAGACTCTTCATTAAAGAGAGATATCTATTTCTACACTGACATGTTAGCACTAGCAAATGCTGTTTTGCATTCAGTTGATTCAGGCTGGCTTGGGAATGTCTCTGTCAACTCCAGCACCAGCTTTTTTGGAGGAGACACTGTTTTATATGAAGGCACTTTAGAAATGTCTGATTTTGTGATGCTGAGGGCAGCAAGCCTGGTGTTGCTAAAATCGTTGGAGTATAAATTCCAGCAATCTAGGAAAGAAGGTGGTGTAGCTGTGGTTGAAATACAGAGTTATTTGCACCCTTTGATGCTTTTCCTGAAGAAGAATTTAAAATCCCCAGAGCATTCCCAGCAGCTGTGCCACCCCTGCTCCTGGCTATCTGTGGTCTTTATGGATCAGGATGATGATATGATAGAGGCAGCAAAGACTTTACTGATTTTATATTCACATTTCAGAAGAATGAACAGTACGACAGATGCAGAATTTTGTAACACGCCATCCTTAGATCAGATGACCCACGAGAATGGGTTTAACCCACACTGCCATTTTTTGATTCTCCTTAACAGTGTTGCATTTGACCACACTTTACTCCTGGACTTTTTGATTTCCGCTGAAACTTGTTTCCTGGAGTACTTTGTTGGGTATTTAAAGCTTCTCAGGGAAAGCTGGCAGGAGTTTTGCAGTGTGTGTCTATATTTTGAAGGACAAAATTCAAGAAGAGGGCTCAATGATGCAGCCTGTGGTGAACAATCAGCCAATGTTTTACTTTCTGAGAGAACTGAATGTGATCAGAAGCCGGCAGCCTTGGCGAATCCTGCTGTGGGTTCAAGCACTACAGCCCAGTCTATTGTGGCAGAGAGCAGTCATTCTGAATTCTCAGTGACTGAGGTTATCAGTTGCTCAGCCGGCCCCTTGGTTGACTATGGGAGTTCAGAGGAATCTGAATCGGAGGAGTTGTATGTTTCAGATGGCTTCACCCACAGAATCCCATCTCCTGAAGGGTTTCAAAGAAAGAGCATTAGAGGAGGAGAGCAGGACTCTACACAGATTTCTTGTGTCACAAAGGAagcagaagtgtgtgtgtgttccaccCAGCCTAAGGGACTGTGGGGCGACCAACCAATCCTTGCTAGGATGTGCCATCAATCCATTATGTGCTTAACAGGGCTTAGAAAAGTGATATGCAGGTTGCAAAGAAGAAACCTGTTTCCTTACAAGCCAGCATGTCTTCTCAAACTCCTAATGCAAATTGAGACAATCAGTGGCTTAAGTGAGTAAAGGGtctattcataaaacataacacCACAAGATTACAGATGTTTCATTTTCCTAATTAGAAGAGAAACGCAATTAAGTTATAATGTCTCGTATCTCTTCCAGGATTGTCCTCTaactttttatgtttatgttttaacatatgtttgttttatcctCTTTCTTGCAGAAAAGTGTTACATTTTGCATGGCACAAATACTTTAGGATTCTAGCCCCACGTGTTCTTGAGAaagctggaaaaaaatacatgtaatgtcTGTTTGAGGTTAGACTTCCTGAGTGATTCTCCCACCTGCTAAACAAAGCAGTTACACCTCTTTCTCTGtcatttgtttgctgttttcacaattcagttatttttaacatatgaataaaaacacttaatctCTA

Function

GO: NA

KEGG:

id description
K22533 LINS1; protein Lines

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007600 True 2653 mRNA 0.42 7 23652533 23657431

Neighbor

gene id symbol gene type direction distance location
AMCG00007602 NA coding downstream 5124 23636442 ~ 23647409 (-)
AMCG00007603 LOC103376162,LOC107563246,LOC104941826,LOC106591416 coding downstream 30771 23603333 ~ 23621762 (-)
AMCG00007601 adamts17,LOC107742308,LOC107553817,LOC107662259 coding downstream 65356 23538929 ~ 23587177 (-)
AMCG00007599 LOC107562943 coding downstream 149614 23492555 ~ 23502919 (-)
AMCG00007597 fah,LOC104948506,LOC106910907 coding downstream 246828 23397074 ~ 23405705 (-)
AMCG00007611 chsy1,LOC107742304,LOC107755644,LOC107662251,LOC107691970,LOC107553812 coding upstream 115301 23772732 ~ 23781085 (-)
AMCG00007607 chsy1,LOC106587790,LOC106562599 coding upstream 161611 23819042 ~ 23821475 (-)
AMCG00007608 NA coding upstream 165060 23822491 ~ 23827715 (-)
AMCG00007610 snrpa1 coding upstream 173738 23831169 ~ 23834638 (-)
AMCG00007609 pcsk6,LOC107662249,LOC107742302 coding upstream 188161 23845592 ~ 23886667 (-)
G24905 NA non-coding downstream 215016 23423613 ~ 23437517 (-)
G24816 NA non-coding downstream 517731 23133791 ~ 23134802 (-)
G24800 NA non-coding downstream 606160 23046113 ~ 23046373 (-)
G24797 NA non-coding downstream 697689 22954085 ~ 22954844 (-)
G24721 NA non-coding downstream 1131449 22518422 ~ 22521084 (-)
G24942 LOC107578340,LOC107755647,LOC107662256,LOC107742335 non-coding upstream 5461 23662892 ~ 23663540 (-)
G24943 NA non-coding upstream 9943 23667374 ~ 23670082 (-)
G24953 NA non-coding upstream 52077 23709508 ~ 23710095 (-)
G24955 NA non-coding upstream 55608 23713039 ~ 23713294 (-)
G25014 NA non-coding upstream 266808 23924239 ~ 23926237 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 232230 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1076079 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1294087 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3179614 20462504 ~ 20472919 (-)
G24217 NA other downstream 3320722 20331513 ~ 20331811 (-)
G25026 NA other upstream 314240 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 605259 24262690 ~ 24281564 (-)
G25422 NA other upstream 1606901 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1973361 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2396333 26053764 ~ 26070848 (-)

Expression


Co-expression Network