AMCG00007602


Basic Information

Item Value
gene id AMCG00007602
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23636442 ~ 23647409 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007602
TTCCTCAAGGATGTTACAGACTGTGCACGAGTGGTTCTGGTGGCACCGCATCTGGCTTCCAGTGAATTTAACCTGGGCCGACCTTGAAGACCGAGAAGGACGTGTCTATGCCAAAGTTTCAGATCTATACATTACAATACCTTACTCCATAGCTTTCCTCATCATTAGGTTCCTTTTTGAGAggTTTATAGCCCCATCAGCAGCAAAGACCCTTGGGATTAAGGATACATTAAGGCTGAAAGTGGCTGACAACCCCATCCTTGAGAAGTATTTCTGCTCACGCTCCAGGAATCCCACACAAGCTGATATTGATGGGCTTTCAAAAAAATGCAGCTGGTCTGTGAGACAGGTGGAAAGGTGGTTTAGGAGGAGACGGAACCAAGATAGACCTGGTataattaagaagttcaaggagGCAAGTTGGAGATTTGTGTTTTACCTGTCAGCATTCATTGGAGGCATAGTAGCTCTTTATGATAAACCATGGTTTTATGACACTAAGGAAGTGTGGCGTGCCTTTCCGAGACAGTATTGGTATTACATCATTGAGATGAGCTTTTACTGGTCCCTGCTGTTCAGAGTTGCCTTTGACATAAAAAGAAAGGACTTTAAGGAGCAAATCATCCACCATTTAGCAACACTTACTTTACTGGCCTTCTCCTGGTGTGCCAATTACATCCGAATTGGGACTCTGGTGATGATTCTACATGACGTCTCTGATGTTATACTAGAGTTGGCAAAGATATTTAATTATGCCAAATTGCCAGTCATCTGCAACACTCTGTTTGTACTGTTTGCCTTTGTGTTCATCGTTACCAGGCTGGTTATCTTTCCTTTTTGGCTTATCCACTGTACGTGGGTATATCCTGTGCTGGACTTTCCTCCTTTCTTTGCATATTATTTCTTCAATGTGATGCTCAtcgtcctgctgctgctgcatgtGTTCTGGGCGTATCTCATACTGCGCATGCTGAACAAATTCCTCTTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007602 True 991 mRNA 0.44 9 23636442 23647409

Neighbor

gene id symbol gene type direction distance location
AMCG00007603 LOC103376162,LOC107563246,LOC104941826,LOC106591416 coding downstream 14680 23603333 ~ 23621762 (-)
AMCG00007601 adamts17,LOC107742308,LOC107553817,LOC107662259 coding downstream 49265 23538929 ~ 23587177 (-)
AMCG00007599 LOC107562943 coding downstream 133523 23492555 ~ 23502919 (-)
AMCG00007597 fah,LOC104948506,LOC106910907 coding downstream 230737 23397074 ~ 23405705 (-)
AMCG00007596 arnt2 coding downstream 268842 23325562 ~ 23367600 (-)
AMCG00007600 NA coding upstream 5124 23652533 ~ 23657431 (-)
AMCG00007611 chsy1,LOC107742304,LOC107755644,LOC107662251,LOC107691970,LOC107553812 coding upstream 125323 23772732 ~ 23781085 (-)
AMCG00007607 chsy1,LOC106587790,LOC106562599 coding upstream 171633 23819042 ~ 23821475 (-)
AMCG00007608 NA coding upstream 175082 23822491 ~ 23827715 (-)
AMCG00007610 snrpa1 coding upstream 183760 23831169 ~ 23834638 (-)
G24905 NA non-coding downstream 198925 23423613 ~ 23437517 (-)
G24816 NA non-coding downstream 501640 23133791 ~ 23134802 (-)
G24800 NA non-coding downstream 590069 23046113 ~ 23046373 (-)
G24797 NA non-coding downstream 681598 22954085 ~ 22954844 (-)
G24721 NA non-coding downstream 1115358 22518422 ~ 22521084 (-)
G24942 LOC107578340,LOC107755647,LOC107662256,LOC107742335 non-coding upstream 15483 23662892 ~ 23663540 (-)
G24943 NA non-coding upstream 19965 23667374 ~ 23670082 (-)
G24953 NA non-coding upstream 62099 23709508 ~ 23710095 (-)
G24955 NA non-coding upstream 65630 23713039 ~ 23713294 (-)
G25014 NA non-coding upstream 276830 23924239 ~ 23926237 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 216139 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1059988 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1277996 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3163523 20462504 ~ 20472919 (-)
G24217 NA other downstream 3304631 20331513 ~ 20331811 (-)
G25026 NA other upstream 324262 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 615281 24262690 ~ 24281564 (-)
G25422 NA other upstream 1616923 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1983383 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2406355 26053764 ~ 26070848 (-)

Expression


Co-expression Network