AMCG00007603 (LOC103376162,LOC107563246,LOC104941826,LOC106591416)


Basic Information

Item Value
gene id AMCG00007603
gene name LOC103376162,LOC107563246,LOC104941826,LOC106591416
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23603333 ~ 23621762 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007603
ATGCGTGACAGCCCGGCACTGCGGCTCCTCCTGCCGTCCCTTCTGCTGAGCCTGGGACTGGACACAGTGTCAGCGGACTCTGGGGACGAGACGGATTTGGTCGTCCCTGCTATGTTAAGCCGAGATGAGATCCACCTGTTGCGGGCAGAAGCCGGGCACAACCGGGCGCAGCGCTCTCTGCCCGGGGCTGACAGCCGGGGGTCGCAGGTCGAAGATGGGGACAACTTGTTCCTCCGATTGCCTGCCTTCGGGAGGGACCTGTACTTACACCTGCAAAGAGACCCGGGATTCCTCTCTGACAGTTTTATCATCGAAGAGAGGGGAGATAAGGAGACCAAGAAGCTGACCCATATCCCTTATGATAAACGGTGCTTCTACTCAGGGCGAGTTCTCAATCACAGCAACTCCTTTGCATCACTAAGCACTTGCGCTGGCCTGACTGGTCTGGTCCAGGTTGGAGAGGAGAGGATGTTTATTCAACCTGTGAATGGCACCCAGGACTCTTTCGTTCACATGGAGCACAATGTCATCAGACAGAAACGGTCTCTCAGATCTAACTCGCAGAACTCTGAAACGCGGGCTGAATACTGTAAAACTGTACAAGgaaagaagaaacaaaagaaggCCAGGCCCACAGAGGATGGGAGGGGCAGGAGGAATGCCATCCGATTGAGCAGAGAGTACACCGTCGAGACAGTGGTGGTGGCCGACTCTGACATGGTGCAGTATCATGGGGCGGAGGCTGCACAGCGTTTCATCCTCACGGTCATGAACATGGTGTACAACATGTTTCATCACAAGAGCTTGGGGGTCAGACTCAACATCCGTGTGACCAAGCTGGTCCTGCTCCACAACCGTCCAGAGAAGCTTAAAATTGGCCACCATGGAGAGAGGTCCTTGGAGAGCTTTTGCCACTGGCAGCATGAGGAGTACGGTGGCGCACGTTACCTTGGAAACAATCATGTACCTGGAGCCAAGGATGACCCGCCCCCAGTGGATGTGGCTGTATTTGTTACAAGACATCAGCTGGCCGGGTACATCCAGACTAAATGA

Function

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 17-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007603 True 1053 mRNA 0.55 7 23603333 23621762

Neighbor

gene id symbol gene type direction distance location
AMCG00007601 adamts17,LOC107742308,LOC107553817,LOC107662259 coding downstream 16156 23538929 ~ 23587177 (-)
AMCG00007599 LOC107562943 coding downstream 100414 23492555 ~ 23502919 (-)
AMCG00007597 fah,LOC104948506,LOC106910907 coding downstream 197628 23397074 ~ 23405705 (-)
AMCG00007596 arnt2 coding downstream 235733 23325562 ~ 23367600 (-)
AMCG00007595 abhd17c,LOC106562647 coding downstream 299217 23284800 ~ 23304116 (-)
AMCG00007602 NA coding upstream 14680 23636442 ~ 23647409 (-)
AMCG00007600 NA coding upstream 30771 23652533 ~ 23657431 (-)
AMCG00007611 chsy1,LOC107742304,LOC107755644,LOC107662251,LOC107691970,LOC107553812 coding upstream 150970 23772732 ~ 23781085 (-)
AMCG00007607 chsy1,LOC106587790,LOC106562599 coding upstream 197280 23819042 ~ 23821475 (-)
AMCG00007608 NA coding upstream 200729 23822491 ~ 23827715 (-)
G24905 NA non-coding downstream 165816 23423613 ~ 23437517 (-)
G24816 NA non-coding downstream 468531 23133791 ~ 23134802 (-)
G24800 NA non-coding downstream 556960 23046113 ~ 23046373 (-)
G24797 NA non-coding downstream 648489 22954085 ~ 22954844 (-)
G24721 NA non-coding downstream 1082249 22518422 ~ 22521084 (-)
G24942 LOC107578340,LOC107755647,LOC107662256,LOC107742335 non-coding upstream 41130 23662892 ~ 23663540 (-)
G24943 NA non-coding upstream 45612 23667374 ~ 23670082 (-)
G24953 NA non-coding upstream 87746 23709508 ~ 23710095 (-)
G24955 NA non-coding upstream 91277 23713039 ~ 23713294 (-)
G25014 NA non-coding upstream 302477 23924239 ~ 23926237 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 183030 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1026879 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1244887 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3130414 20462504 ~ 20472919 (-)
G24217 NA other downstream 3271522 20331513 ~ 20331811 (-)
G25026 NA other upstream 349909 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 640928 24262690 ~ 24281564 (-)
G25422 NA other upstream 1642570 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 2009030 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2432002 26053764 ~ 26070848 (-)

Expression


Co-expression Network