AMCG00007623


Basic Information

Item Value
gene id AMCG00007623
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24004839 ~ 24011628 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007623
AGAAATCTCCTCCCACATGAACTTTGAAAAGCCACCtctttatatgtttatatcaCCTGCAGGTATAATCAAGTCAAGAGCTGCAGCCTCGCTCGCTCATCACACTGTGGGCTGACAACTGACCGAGGACATGGACAAATATACTTACCATGCTCAATGATTTGGAATCACAGGGATTTAATTTAagTAAATGAATCTTCCTTCAGTGAGAATGTTACGCGCTTGGATTGCCTCATGCATGCTGCTACAAGGAGCAAACTGCTTCACAGTTCAGGATGTTCAGCATAATCGGTGTCTCCAAACCTCCTTGGAGGACCACAGCCTACAGTTAGGACAGTGTAATCTGAACTCAGAGCTACAGCAGTGGTTCTGGAGTAAGCAGCATTTCTTGGTCAACAAGGCCACAATTAAGTGCCTGTCGGCCCAGCAGGCTAACCTGGTACAGACAGCCAGCTGTGACAGCAGTGATGCTCTCCAGTGGCAGTGCCACCAGCGCAGACTGATGGCCCGGGGTGTCGGGCAGGGCCTGAGCTCTGATGGGAGTAGGCTGTTCCTGACCAGCAACAACAAAGAAAGAGCCAAGTGGAGTTCTATTGAAGGACTGGACATCTGCAAGGAAATGATCAGGTCTAAAAGAGCTTCTGAAGGCTCAGAGCTGAATGGCAGCCCAGAGCCAGAGATGACTGAGGCTCAGGCAGAGAGAGAATATCTGGCATGGCTGTACCGCACAGAGGACTCATCTCCATGGAAGTACTCTATGTTGGGATTATCTTTCTTTGCTCTGTTGCTGGGCGCCCTGCTGTTGGGAAAGGGCATCATGGGAAACAGGAACAGGAAGAAGACAGCCACGTACAAAGCGGCTGCCCAGCCTGCGAAAGCCGACGAGCTGCACAGCCTGAACGAGATTAAACAGCCCTTCAGCTCCTCCCACGAACACAAGATCTCCCTCAGCAGCGCCAACTCCCAAAGCACCCCCCCCAAAGCCGGGGAAATCCTCATCACCTGGAAGGATGGGAAAACCTCCCAGATGTACGCAGATCCGCACGAGGAAACTGTGTAACAACACCAACGACAAACACTGCCAGTAGCCTCAGCTAGTCTCTGCAACAGGAccaagagacacagagagagagagagagagagagagagagagagagagacaactcACTGATGATGATTCTTTTACATCCCATGTGACAGTGCAGTTTCATCAGCACTCAAGAGTCTCAACCTCCAGCATGTACCATCCACACTTATAGCAATATCCAAGAAAAGTGCCACCTACTCTTTTCCCCACCTCTGTTTTACTTAACATCAGGTTCTGCTGATTTGTACTACCCTCTCCCTACACTTTCCCTATTTTCCCTGTGCATTGGCTGCTGGACAGGATGTCCCGCTTCTTCATCACACGGGATGGGGCAGACACATGACATCATCACATGACAACAACAGCCCACCAGTAGGACATTTCTGAATTTAAATTTATTCACCTTTtcgagaaaaaaaatatataaaagacaatacaaaagatacaattaagaaacaaattatatatttccaacaCTTTCATATTCAAATGCTGGTATGGGTGCCGTTGCTTTGTAGTTTGAAGTAACTACTGCATACTGTACTTGAGTGAAATATCGAAAGCAATCTACCCCTGTTGATCTTGTCCTGTTTATATACATGTCTTTTGTTATGCCCTACAGACTCTATGTGTATTCAGGGGTACAGTCATACAGTACATGGGTGAGGTTTTCATACACGCAGGCTAGTGGAGGTGGTGGATTGCATTTCTCATTCTCTGCCCCAGGAATGCTGGGTTTACCTCTGCATACATTCCCACAGTGTTGAAAGTATCTGACCACACACTCCAGATTTATTGTAATCCATCAGGAGTGGACATGAGAAAATCAAAGAGCTGGAGATAAGAGGACCACCAAGCCAATGGCTTCACATCTGTGCTTGGCCACACTGAGATTTATTACAAGAAGCAAACAAGGTATCATAATCACAAACGGACACAGTGGCTTAACATCTCACTgcaaagcttttaatttaaaacttgtTCTGTGTAAGAATTTTTTACACATATAGAAAACTGCTCTCCTACTTTGACTCGTTTATTTTTTACTCATCTGCTTTAAGCAGTTCTGTATGGTACATGCCTTACGGTACGTGTTTTTAACTGTGTCTCAGTCATTTCAGGGATCATAAAACAGTCTATCATGACAATCATACGTATGCTTGTATTCCCTCTGCATAAAACTAACAAGGTTGTTGTTGTATTGTAGAAAATGTTTCACTGGGATACATGTACTGTCATCTGACTTTTGGTGTCTAGGTTTATAAAAACTACCTGTCAAAGTAGCTGGGTTTAATCACATTTACACTCTTATCAATAGCTAGCACATAACTTAACCTTAACATTAATTCTGACCTTTGCTGTCTACTTCTGAAGTGTCAGCATGCCTTTCACCTTTTACTATAGGATCCATGGACCTAACCCTTACACTAGACCAAAGCAAATCGAACCCAATCTTCACTACCCTAACCCAATCCCCTTCCTCAACCTAGCCTATTAATACACTCACTAAAACCCTGCACTTACACCAGTCAGACTCTAGAGGGGAGTCACGTGTTGTTCAATTAGTCAgacaactgaaaatgtaatcttgTCCCTGTAACCATCATTTTAGACAGGCTCTTTGAGCAGAGAGTCCATTTAACATAATGCAGCCCCTCACAAGACTGTATGTAAAAACCCAATTGTTTGCATTTAGATCAGATCAGTAGTCTTGTTGAATCAATGGAGGCATGGCCACTTACCAGCGACAACTAGTCTGGCCAGCCTGATTCTTTAACCCAGAGGATCTCACACTGTTCTTATTGGTAGGCTCATtcttaccaaaaaataaaaatccccaaaTCCCAACAACATCTCCCCCCTCTCCTCTTTACATCTGTGGTGTGAACTTCATTCAGTTTAAGTACTGCTGTCAGTGATCCAGACCTCCACAGAGTCTTCTCCACCTGTAGTCCCCGTGCTGTCCCCATTACTGTCCCCTGTGCTTACGGGGCAAGAGGGGACTCCAGTCTGCATTGATGCCCATTCGTCCAGACTCTGTAGTGATTTTGCTGTGTCCGTAAGGGAACTGGATGAAGAGCATTCCTCTTGTCACCTTGAAATTTCAATCCAGGGCTTATGCGATGGAATATAAGGCATAGTATGTTCCTATGACAATTAAAAGAAGCAATTTAAAAGCATCCCACTGTGTTCAGGGCTTGCGTAGCTTAGCCGGGTGTGTATGTGACTGGAGTATCAATGATCTACTTCTGTGTGGCACGCCATTCTCTTCCACGTCACAGTATATAAAGAGAGTTGTGCTGCTGCAGCCCCCACGTGGCTGAGTGAAGGCACTTTCATAGCTGTTAAGGCACATGCAAATATGACCTCATAAAGCGATGCATCGATGCCAGGGTTTCAGCAACCAAGGAAGAGAACAGGACTGGGCACCAATCCAAATGAGGATCAAACTGGAGTTATCAGCACCATGCTCAAGCAAAGTGAGCGACCAGCTCCCCTGGTAATGGAAGGCAGTTGTGGATGC

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007623 True 3611 mRNA 0.45 6 24004839 24011628

Neighbor

gene id symbol gene type direction distance location
AMCG00007628 NA coding downstream 7447 23996928 ~ 23997392 (-)
AMCG00007615 spg21,LOC107594761,LOC107685233 coding downstream 38196 23961967 ~ 23966643 (-)
AMCG00007609 pcsk6,LOC107662249,LOC107742302 coding downstream 118172 23845592 ~ 23886667 (-)
AMCG00007610 snrpa1 coding downstream 170201 23831169 ~ 23834638 (-)
AMCG00007608 NA coding downstream 177124 23822491 ~ 23827715 (-)
AMCG00007627 LOC106587701 coding upstream 5837 24017465 ~ 24021945 (-)
AMCG00007626 NA coding upstream 10925 24022553 ~ 24030570 (-)
AMCG00007624 vps33b coding upstream 20925 24032553 ~ 24045372 (-)
AMCG00007625 NA coding upstream 40844 24052472 ~ 24055090 (-)
AMCG00007629 NA coding upstream 66524 24078152 ~ 24100673 (-)
G25024 NA non-coding downstream 43996 23958476 ~ 23960843 (-)
G25021 NA non-coding downstream 46657 23957980 ~ 23958182 (-)
G25019 NA non-coding downstream 49427 23954421 ~ 23955412 (-)
G25014 NA non-coding downstream 78602 23924239 ~ 23926237 (-)
G24955 NA non-coding downstream 291545 23713039 ~ 23713294 (-)
G25058 NA non-coding upstream 19407 24031035 ~ 24031304 (-)
G25075 NA non-coding upstream 36032 24047660 ~ 24048480 (-)
G25076 mfap1,LOC102796914 non-coding upstream 37596 24049224 ~ 24049437 (-)
G25077 NA non-coding upstream 37925 24049553 ~ 24049784 (-)
G25078 NA non-coding upstream 38187 24049815 ~ 24050073 (-)
G25026 NA other downstream 32174 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 584536 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1428385 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1646393 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3531920 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 251062 24262690 ~ 24281564 (-)
G25422 NA other upstream 1252704 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1619164 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2042136 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3346103 27357731 ~ 27370519 (-)

Expression


Co-expression Network