AMCG00007625


Basic Information

Item Value
gene id AMCG00007625
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24052472 ~ 24055090 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007625
ATGGCAGCAGAAGGCGATGTAGATTTGGACCTAGAAGCCGAGGAGAACTGTACGGGAAAACCGGCAGAAAAACCTCGCAAACATGACAGCGGAGCGGCAGACCTGGAGCGAGTCACCGACTATGCAGAGGAGAAGGAAATTTCCAGCTCCGATCTGGAAACGATGGGCGAGATGGAGATCCCCCGCGGCGTGGCGGAGCGCAGTTTGAGGGAGCACATGGGCAATGTGGTGGAGGCACTGATTGCCCTGACCAACTAACTCAACGGTGCAAACACACCCGCCCACTGCCAGGACCACAGCAGCGGCCCGGACAGCCTGTAGGCTTCAAAATATCAGTGTAAACCTGAGCAAAGGACTGCTTTTCCTTTCCAGCGCAGCAACTTTTGGACCACAGGGATTCGATTCTAAATGCCTGGCTTATGGACatacatttctttgtattttaagaacagaaataaaaaatgtcattggaatattttttcccccctcctccaaCTGGTCAGATGGATTTgtcattgctttttaaaaagtaccaTGTTATGTTGTAGACTTGTTGCAGTTGCTTTCGATTACCCCCCAGCTCACAACTAATAAATACACCATATACTACTCTACA

Function

GO:

id name namespace
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function
GO:0016859 cis-trans isomerase activity molecular_function

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007625 True 616 mRNA 0.49 2 24052472 24055090

Neighbor

gene id symbol gene type direction distance location
AMCG00007624 vps33b coding downstream 7100 24032553 ~ 24045372 (-)
AMCG00007626 NA coding downstream 21902 24022553 ~ 24030570 (-)
AMCG00007627 LOC106587701 coding downstream 30527 24017465 ~ 24021945 (-)
AMCG00007623 NA coding downstream 40844 24004839 ~ 24011628 (-)
AMCG00007628 NA coding downstream 55080 23996928 ~ 23997392 (-)
AMCG00007629 NA coding upstream 23062 24078152 ~ 24100673 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding upstream 59465 24114555 ~ 24148021 (-)
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding upstream 95254 24150344 ~ 24186890 (-)
AMCG00007634 NA coding upstream 196376 24251466 ~ 24256041 (-)
AMCG00007644 ppip5k1,LOC105015023 coding upstream 313541 24368631 ~ 24403122 (-)
G25079 mfap1 non-coding downstream 2036 24050148 ~ 24050436 (-)
G25078 NA non-coding downstream 2399 24049815 ~ 24050073 (-)
G25077 NA non-coding downstream 2688 24049553 ~ 24049784 (-)
G25076 mfap1,LOC102796914 non-coding downstream 3035 24049224 ~ 24049437 (-)
G25075 NA non-coding downstream 3992 24047660 ~ 24048480 (-)
G25175 NA non-coding upstream 292009 24347099 ~ 24347419 (-)
G25176 NA non-coding upstream 294940 24350030 ~ 24354310 (-)
G25177 NA non-coding upstream 313079 24368169 ~ 24368373 (-)
G25239 NA non-coding upstream 377990 24433080 ~ 24507819 (-)
G25248 NA non-coding upstream 443275 24498365 ~ 24542158 (-)
G25026 NA other downstream 79807 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 632169 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1476018 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1694026 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3579553 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 207600 24262690 ~ 24281564 (-)
G25422 NA other upstream 1209242 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1575702 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1998674 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3302641 27357731 ~ 27370519 (-)

Expression


Co-expression Network