AMCG00007626


Basic Information

Item Value
gene id AMCG00007626
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24022553 ~ 24030570 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007626
CACGGTGAGGATAGCGAGAGCAGAAAACAGGTGAAAACAAGGGAAAATAGGCAGTATTGGAGAAGGAGGGGAGTCACAATGAGAAAAAGCGAGGTGCTTGCCGCAGAGTCTGTGGCCTGTCTGAATAAAGCACTGTGCCGACTGAAGGACATCTGGGAGGAAATTGGGATCCCAGAGGACCAGCGGCTGCAGAGGACAGATGTGGTAAAGAAGCACATTAAAGGTCTGTTGGACATGATGATCGCCGAAGAGGAAAACCTCAAGGAGCGGCTGATGAAGAGTATAGACATGTGCCGCAAGGAACTGGACGTGCTGTGCAGGGAGCTTAACCTGGCCCCCTTTGAGGAAGAGGAGGGCAACACAGTGCTGCAGCTGGAGAAAGATATCCGCACACGGCTGGAGGTGATGATGAAGCAGAAGAACCAGAGGATGCAGGAGCTGAAGGCCCTGAAGGAGCAGGACCAGGACCTGTGTGACATCCTGTGCACCAGCTCCTACTGCATCGACGGCGACGTGGTCCCCACCCTGGAGCAGCTAGAGCACTTCCGCCGCCATATCGCCAGTCTAAATGCAGAAAAGGAGCGAAGACGCAGTGAGTTTGTTGGCATTAAGAGGCAGATCATTGTATGTatggaggagctggagcagctgcCAGACACTAGCTTCGAGAGAGACGTGGTGTGTGAGGATGAGGAGgctttctgtctgtctgacgAGAACATTGCTGCTCTCAAACTGCTCCTGAGCCAGCTGGAGGATCGGAAGGCTCAGAATGAAGTGCTGTGTTCGGCCTTTCGTGGTCAGATTCAGGAGCTGTGGAACAGACTGCAGATTCcccaggaggagagagaagccTTCTCTGAGCACATGGTTATGTGCAGGAGGAGAAATATAGATGCTCTACAAAGAGAAGCCGACCGTCTGGAGGAGCTGAAGATGCAGAATATTCTAAGTGTTATAGAAGCGATCCGAGTGGAGGTGGCCGCCTACTGGGACAAATGCTTTTACAGCACCGAACAGCGCCAGGCCTTTGCTCCTTACTATGATGAGGATTACGGTGAGGAGCTGCTGCGCTTGCATGATGCTGAGATCCTGCACCTCAAGCAGCACTACGAGGATCACAGAGAGCTGTATGAGGGCgtgcacaaatggcaggagagCTGGACCCTCTATCTTGAGCTTGAGAAAAAAGCAACTGATCCCTCCCGGTTCACGAACAGGGGAGGAAACCTTCTGAAGGAGGAGAAACAGAGAGCTGATCTACACAAAAGTCTGCCCAAGCTGGAGAAGAAGCTCAAGCAGCAGATTGACCTGTGGGAACAGGAGCAGGGCCGGGAGTTCCTGGTTGGTGGACAGAAGTTCATGCAGTTTGTGGAGGAGCAGTGGGAGCTGCACCggctggagaaggagaaggagaaacagGAGAGGcaaCTGAAAAAAAGTAAGCAGATTGAGGAAGAAATGCTCTACGGCACTATTCCACGAACACCATCCAAAAGGAGACTTCAAGGAGCAAACACTCCTGGCAAATTGAGAAAGTTCAATTCCACTTCCATCTCTAGTGCCACTCCTAACAGCACCATGCGCTCTGCCTTCGGGGGAACCCTCTGCCACTCCCCAGTATCTCGCCCCCCTCTATCTGCACAAAAGCCAGCACAATCCATTCGCACGCCAGGACGAGGCAAGCCGCCCCGTGCTGGCCTGCTGGAGCGCAACAAGGAGAACATCTCCCATCTGAATGGAACTGCTATGAGTGGTGCGTTGAGGAGTGCAGCTAGTCCACAGCGTAACATCAGCATTAACTCAGTTGCCAGCACCTATTCTGAATTTGCGGAATTTGTCAACATTGATTCCACCACCCTTCTATCAAGCGAGAACTGTCAAAAGCATCCAAGTCTAATTGCCAGACAGGCATCTTAAACTCCACCATCACTCACAATTGCACTTGACTTGGAGACCTGTGTTCACAGCAGTGTTGGAGATCAGGGTGGCACCCTGGAGCGGCTGATGCGAACCCCTGTGTGCTCTGTGTAAATGCTCTCCTTGCCCTTTTACTGGCCTCTGGGTGTTTTAATGAAGGTAAACGTGTTAAATGCAGCAACATAACCAGCAACTGTGATCCCatccaaaataattaaataagcttGTATAAGAATTTGTAATATATTCCTATTGTGATTAACACTAAAGCTTTTTGGCACTACTCCAGAGTAAAGTATGTTTTCTAATGAACATAAGAGATGCATGTATTAATAGACTaacagatgtatatatttataccatTTCAAAATCATCCAAAAGATGTATGTGTAATGTCCAAGTTAACATCTACTCTTCAGAGCTGGTTATGTCTTTagctgtatatatagtataaaaaaaaaatgtttttagctTCTGCATAGTAATGCAAAAGTATGTAGTTTCTGAGTTGCATTTATGAGTATACTGAGTAGGTATGAGTTAATCATGAACATTTTGCACATTGTTGGCACTACCTTTCTGTCTTCTATTTTCCTATTTATTTCTTTTACTGTACCTTTCACCACTTACTGTTAAAGACTGTctttattcaaaatgtacaacTGGATTCACAGAACCTGATTAGCAATAATTTTGGACTACCCTACCTAAAATAGCACTGGATAGTCCCAAGACTCGTGCTAATCTGAGTCTGTGTTGTGTACTGGGTGGCCTGAAGCACAGTGACCAAGAACAACCAAGAGCAACCAAGAACAAGGTTTCCCTTTCCATTGGCTGTGGTTTATTGACCAGATCGTTTGGCAGTGTGTAGATGCATCTCTGCTTCTGTAATTCCAAACTGTTGTCTAGTCTGTGGAAGCTTTGCTATTTTTGGTGAGAAGGTATATTGAATATACATTCTATCAAAACTGTTGTATTATACTCTAAAGAAGATGGACTAGAATTAAGGTTTGCATGTACTTCAGAAGAAAGGTGTTATTTTACAGCTATTTCTTTCAAGGGTTCCATGAACACTTGTTTAAAAAGTGTCCTATCTAGAGAAATATGTGCTGTAAATTTGATATTATATTCAAATtgtatatatcaaataaatacaatcacttTCAGCTGTc

Function

GO: NA

KEGG:

id description
K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007626 True 3092 mRNA 0.46 15 24022553 24030570

Neighbor

gene id symbol gene type direction distance location
AMCG00007627 LOC106587701 coding downstream 608 24017465 ~ 24021945 (-)
AMCG00007623 NA coding downstream 10925 24004839 ~ 24011628 (-)
AMCG00007628 NA coding downstream 25161 23996928 ~ 23997392 (-)
AMCG00007615 spg21,LOC107594761,LOC107685233 coding downstream 55910 23961967 ~ 23966643 (-)
AMCG00007609 pcsk6,LOC107662249,LOC107742302 coding downstream 135886 23845592 ~ 23886667 (-)
AMCG00007624 vps33b coding upstream 1983 24032553 ~ 24045372 (-)
AMCG00007625 NA coding upstream 21902 24052472 ~ 24055090 (-)
AMCG00007629 NA coding upstream 47582 24078152 ~ 24100673 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding upstream 83985 24114555 ~ 24148021 (-)
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding upstream 119774 24150344 ~ 24186890 (-)
G25024 NA non-coding downstream 61710 23958476 ~ 23960843 (-)
G25021 NA non-coding downstream 64371 23957980 ~ 23958182 (-)
G25019 NA non-coding downstream 67141 23954421 ~ 23955412 (-)
G25014 NA non-coding downstream 96316 23924239 ~ 23926237 (-)
G24955 NA non-coding downstream 309259 23713039 ~ 23713294 (-)
G25058 NA non-coding upstream 465 24031035 ~ 24031304 (-)
G25075 NA non-coding upstream 17090 24047660 ~ 24048480 (-)
G25076 mfap1,LOC102796914 non-coding upstream 18654 24049224 ~ 24049437 (-)
G25077 NA non-coding upstream 18983 24049553 ~ 24049784 (-)
G25078 NA non-coding upstream 19245 24049815 ~ 24050073 (-)
G25026 NA other downstream 49888 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 602250 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1446099 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1664107 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3549634 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 232120 24262690 ~ 24281564 (-)
G25422 NA other upstream 1233762 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1600222 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2023194 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3327161 27357731 ~ 27370519 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000345_01787791_01792034 NA coding CI01000345 null 1787791 ~ 1792063 (+)