AMCG00007629


Basic Information

Item Value
gene id AMCG00007629
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24078152 ~ 24100673 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007629
CTGAGGGGCTGCAGGAGACGCCTCTCCCATGACATCTCAGGGCGCACATTTCATTCAAAAGTTGGCAAACTTTCTAAAACAACACTATCCAGGTGACTTCCTTTTTATAATATAAGTATATCCCTTTTGCTTAACGTTAGTTGCCTCACCTGGAAGAGAAAGCGGTGGGGATAAGTGGACCCAATAAGTCatatttgcagaaaacaaagtaatgaaGGCATAGGCGGAAAAGACTGGGGCGAGGAAGCCGACCTGCACACCTGCACTGACAGACCTGCGTGATGCGGGAAGCGGCCTGCGCTGGACCCGGACTCCCGCGTCGGTCTGCACAGAGTAGAGGCGGCGGGTCCCGGCGCGCAGCGGCGCAGAGCTGCGGGGAAATGGAAACACATTGCGCTGTCAGCAGCCCTGCCCCCGCCCAGGTGGAAACACAGAGCCCGGCTTGAATTGCTCAACCAAAGGTTAACTTTGAACTTCCAAGGACAGTGCGGACGAAAATAAAGTTGAATGAACCACAGAACCTCATGGACAAGGAGGTGAATTTGAAAGCACCTTTGAAAATGTAGGTTTTAGTGTCTTCTTGTTCATTTACAGGCAACATTCCCTCATTGAAGCGGCATCTCCAGACACACTGAAAAGAAGAGAACACTGACTTTGAATATCATTTTAAGGATACCAAGAAGCTTTTGGAAAGTATTAGACTATATGTTGTTGAAATAGCAACAAAGAAGGGACGCTCTTCCACTCCTtgctaaattacttttttttcttttaatgcatcACACTTGCATGACGAAGAAGCCACAGTATCCTGTGTAGACGCTCACCTCTACACGTGTAGTTTTCATAATCCTGCACCTGGTACTATTTTGTGGAAAAAAGGGAAGAGAGTTAAGTAGAGATCTGTCTGGGCTCGTTTTCGATACAGTGATGTGGcgtgcggagagagagagaaaaaggaaatacagtatttgaagaaaaatgattaaacagTAATTATACCCTAGCCAGCGCTCGGAAGGCTCGGAGGTCTTCTCCAGGACCCTGGTGAGATACCTTACAGGCGCCAGGGGTTTGTCAAGGGAAAAAAACTGCACCCATCTCCCGCCCCccagtttttatttactgtatcaTTCCTGGAGAGTATTTGAAACCAGTAAACAAAGGATTTCCTTAGTTCAGGGGTTACAATGGGGTGATCCCACAATCATGTCTGGACTATGGGGGCTCCTGCAGTCTTACTGATGCTCACCCCGTTTGCAGAACTTTAATCCGCGGAAACTTTTTTATCCTTTTCATTATTGCTGTTCATTTGATATGCTATGTCTGCTGTGGATGTAGCCTATACCTGAAAGTACAGGAACACTATCCTAAAGCTGGGATTGGTTTTAATCTCCTCGTCGGCAACGAGTATGTCACTGCCAGCTACCAGGAGGCTGTCTCAATGCGCAGCTCTGACCTTCATCACTCTGCTGGTCTGCCCAGTTTGCCTGTCCTCCCGGCACGGCTCTCTGGGAAATCCATCCACCCTCCCAGGCCGCGCCCGTCGTCAGCTGCGCTACGTGAACGAGTGGAGCTCCTGGAGCGGCTGGTCTGCCTGCTCACGCACCTGCGGAGGGGGCGCCTCTGTCCGCAGTCGCACCTGCATTACCAGGAACCCACTTGGGGGGCCATGTTCGGGGGAACCCAGGCAGTACAAAATCTGCAATAGCAAGGAGTGTGCAGCGGGGTCGGTGGAGTTTCGGGAGCTGCAGTGCGCTGCCTTCAATGACAGGCCCATTCTGGGTGGAGGCACGTACAAGTGGACACCGTTTCATGGAGGTTCCAACCCCTGTGAGCTGAGCTGCCTGGCAGTTGGGAACAATTTCTACTATAACTTTGGGCGAGTTCTGGATGGAACACCTTGCCAGACAGAGCCCGGCGGAGTCTGTGTCAATGGACGCTGTTTGAAACCTGGCTGTGACCTCATCCTGGgctcagagcagaaggaagatGCCTGTATGGTGTGCGGGGGCCACAATTCCACCTGCCTGCACCACCACAGTGTGTACCAGAGCCACAGCCAGATTGCCGGCCCATTCGGATACAATGAGGTGACTATGATTCCTGCAGGGGCCACTCACATCCGAGTCACCGACAACAGCAAGAACTACCTGGCACTGCAGAACGGGCACGCCCAGTTCATCATCAACGGCAACTGGAAGATCAACGTACCTGGGGAGTACAGGGTGGCTGGGACCAAGCTACTGTACAAGCGCTCTGCAGACCTGTGGGAGAGCTTTGAGGCCATGGGGCCCACCCAGGAGGACCTGCACATCATGGTGTTGTCCACTGATAGGAATTCTGGGATTGAATATGAGTACTGGTTGCCCCCTGATCGCTACGCCCTGTACCACGGGAGGAAGAGCCCACTGCGGCAGCCACACCACACGGACAGTTTTCCACCATGGCAACCACCCACCACCACGCCTACTGTCACAACAACCACCACCTCCACAAccccaaccaccaccaccacgaCCAGGCCACCGCCCATTGGCTCCCGCCCACTGTGGGGGCCCAGGCCAggacaccccccccaccagcccCAGGCCCGGCTGGAGAGAGACGAGAACCGCAGCAACCTGCTCCCGCACCCGCCGCGCGCAGGGCATTGTGGGAAGTGCAGGAGAGTGCGGGGCAAAGGAGAACGCCAAAAACAGTACTGCCAAAAGGACTTCGTGTTCCGGGGAAAGGTCCTGGGGAAGCAGGACCGCGGGGAGGAGACACGCTACGACGTGCAGATCATCCACACGTACCGCAACCGTTTCCGCCTGGAGCACCGCGAGTTCCTGTGGGTGCCCAACGCGTGCGACTGCCCATCGTTGGACGTGGGGCACCACTACATCATGATGGCCCGGCGCCACGTCAACTATGAGCGGACACTCAACCGTATCCTGCTGGAGGCCGACAGCTACGTCCGCCCCTACCGCACCCGTGAGGACATGCTGCTGCGCCCCCTAGAGGAGAAGTGCAGTAACCAGGGACCCAAAGAGCCCTCCGAGCTGAGAGGCTAGCACTCCGAAGACGcaaaacacgcacacgcacacgcacagacaccTTCTCTCTTGGACAGCGCATCCTGGAGCCGCACACGCAACCAGAGGAGACCGGCCAAGGTGTTTGTAATGACCCACAGGGCCAACATCAGGGGGAGGGAGCTCGGAGAACTGTTTTGAGGACCATTTAATAGATATCCGGGAGGCATGATGCTCAGAATAGAGATCACGCTGAATGATgaaaatagaatttaaaaaaataacagaaaagagTCCAGGAAATCCATGAAGTTGCCAGTATGATTTGGAGGACATGCCCACctgaacaacagcaacagcacaaCTCTGAATCTCAATGGATGAACAGAGGAAGGTAGTCTGCTGAGGTTTACCACTTAACCACCACTTTAAAAGGTGCAATAAATAtctggggaagaaaaataaatcaatgcaaaaaaatgcctttgattataaataacaaagaTGTCAGTGGTGCATATTTAGTACTATGTTACTGTAAGGAAGTCTCATAAGTAACTCCTGCTgagctttttaattgtatgtcaGCCTGCATAGTAAACAGTACCGGTTCTCTTGCCAGGAGTCAGAGCACCTCCCACAGCTCAGCACCACAGACAGGGCCTGGGCCTTAAACAGCCCATCACCCTGAGTGTGTGTAGGATTTAGTTAGATCTTaaactctgtgtttgtgtttgattgcCTGCCCTTTGCCCACTAACCGAACCCCACCTCTTTAAGACAGCACTGTGTATTGGTCTGTGCCATATTTATGAAGCCAAAGGatagagagaagaaaaatcacTGGTTTATAAGCgataaatgcatttatacagGTGTATTGTTTCTAAAGTATTGCCACTATTTTTCAATCTaacaaagtgtattttattactatttgaatattataattattttgtattattgttgttattatcctttaataatataaaatgtacataatccTCCATGAAGCCATGATTCTTCTGTATCTTTACCTCCATTAGCAACCTGTCTGTAGATACAAGATACATGGGTGGtccacatggaaaaaaaaaaaaaaaatgggataATATCAAGACTGAACTTCATTTTCTATTTGGCCTCTTGTGAGTTTATCAAAACTAATCTTCTCAAGCCAAAACAGAATGTGTTCCAGACCAATTTCATCTTTTTGACTCATTCCCATGTCTGTAAGAGCTACCCGTGTCACTGCTGTGAGATTACTATATGAAATGAAGACAACTCTCATTGTTGTATCTTGGTAAAAGACCCAAACCGGTCCTTCTGGAATCGGCCGTTCTGGGCACATTCtcaggattcctgtgtgggaacGTCTAAGCCGTGCTATAAAACTGTAAGGCACATGCaagaacaaccaaaaaaactacatatttataataacaatgtatttaaaaaaaaaaaaccttcacatTAAATATGACTACTGCTGTATACTCTTAAAAGTTTCAAA

Function

GO: NA

KEGG:

id description
K24432 ADAMTSL5; ADAMTS-like protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007629 True 4530 mRNA 0.49 13 24078152 24100673

Neighbor

gene id symbol gene type direction distance location
AMCG00007625 NA coding downstream 23062 24052472 ~ 24055090 (-)
AMCG00007624 vps33b coding downstream 32780 24032553 ~ 24045372 (-)
AMCG00007626 NA coding downstream 47582 24022553 ~ 24030570 (-)
AMCG00007627 LOC106587701 coding downstream 56207 24017465 ~ 24021945 (-)
AMCG00007623 NA coding downstream 66524 24004839 ~ 24011628 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding upstream 13882 24114555 ~ 24148021 (-)
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding upstream 49671 24150344 ~ 24186890 (-)
AMCG00007634 NA coding upstream 150793 24251466 ~ 24256041 (-)
AMCG00007644 ppip5k1,LOC105015023 coding upstream 267958 24368631 ~ 24403122 (-)
AMCG00007648 NA coding upstream 363054 24463727 ~ 24464347 (-)
G25079 mfap1 non-coding downstream 27716 24050148 ~ 24050436 (-)
G25078 NA non-coding downstream 28079 24049815 ~ 24050073 (-)
G25077 NA non-coding downstream 28368 24049553 ~ 24049784 (-)
G25076 mfap1,LOC102796914 non-coding downstream 28715 24049224 ~ 24049437 (-)
G25075 NA non-coding downstream 29672 24047660 ~ 24048480 (-)
G25175 NA non-coding upstream 246426 24347099 ~ 24347419 (-)
G25176 NA non-coding upstream 249357 24350030 ~ 24354310 (-)
G25177 NA non-coding upstream 267496 24368169 ~ 24368373 (-)
G25239 NA non-coding upstream 332407 24433080 ~ 24507819 (-)
G25248 NA non-coding upstream 397692 24498365 ~ 24542158 (-)
G25026 NA other downstream 105487 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 657849 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1501698 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1719706 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3605233 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 162017 24262690 ~ 24281564 (-)
G25422 NA other upstream 1163659 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1530119 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1953091 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3257058 27357731 ~ 27370519 (-)

Expression


Co-expression Network