AMCG00007634


Basic Information

Item Value
gene id AMCG00007634
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24251466 ~ 24256041 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007634
CTGGGATATGTAGTACTGTTGGCGGCGAAGGAACAGGCTGCAGTGTTAGCAGTGAAGCCACTGGCATTGTATATTAAAGGGGAGACCTAGTTGGAAATGTTCAATTCTGGCAACAAGGACAGCTGTTGGGAATCCCAGCAGAAGGGTACCAGGTGCTGATTAACACTAAAGCCTACATGGTGTTGCAGTGATGGCGGAGGGGAGGAGCGGAGAGGACATTGTAGCCGAGTTCCTCCGTCAGAACCCCCACCAGGCGCAGTGGGTGGAATCTCTCCGGGGGCATTGTGAGACGGACAAGCAGTGGAGCGCCAGGCGTGAGTTCATCCTGCGAAATATGGAGGTCTTTCCCACCATCCAGCCAGGCATCCCCAGCCCCAGCCTGGACCGCCTACTCGCGCTCTCTATGGCATGGGCTAACCACGTTTTCCTGGGTTGCCGGTATAGCCAGCCTGTAATGGACAAGATTATGGAGATGGCAGAAGGTGTCGTTGTTCAAGATGCTCCAGTTTTTAGGACAAGAGATGAGATAATGGGCAAAGGCGGGGAGACTGACGGCTCGGGAAAGAAGCTGAGGCCTGGCAGCAGTGGAGTCCGAGCCTCTGGACGAGGGGGGACCAAACCCGGACCCTCGCCGCAGGCACCCATCGAGCACCAGCCCTTTTTCAACCGCTTGTACAAGGCAGTGGCCTGGAAGCTAGTTTCGGCAGGAGGATTCGGACCCAACCTGGACCACTATGACATCCTGCGGGCCTGTGTGGAGGCGTCCAAGTCCAGCCTGAGCTGTGTGTTCGTGCCCCTGAAGGACATCCCCGACCTGCCTGCCAGCCGTGTCCAGAAGGAGGGCCAGGTGTGCGAGCTGCGCTGCCAGACAGTCTATTTGGGCACTGGCTACGGCCGCAGCGAAGATACCGCCAGGGCCATGGCTGCCAAGGAGGCCCTCAAGACCTTCCAGGGTCGCAAGGTCACAGTGAAGGTATGCCGGCGGAAGTACCGTGGGAAGGACGTGGAGGACTTGGTCCTGCAGGACGACCAGCTGAGGAACTCGGGCATCCCCCCTGCACTCGGCTACCCCTTCCTTCCTGAGCAGCAGGCAGCCACCCTTTAATACTGCAAAAGACTGCAAAGCATCTtgaattagttttgtttttgttttgaggcGGGGGGTTGTTGGCTTTCTTTCTCTGCTGCTCCTCTTAACTGCTCTGGTATCTCAGCAGGATTTATGTGAAAATCCcttagtagtttttttttttttttttaataaatatgtaaccCTGGTCTTGAAAGAGCTGTTCTAGAGCATTCTGACGACAATGCAGGCAGAAGAAACTGAATCGGTTGTGTCAGAATGCAGCCATCAGGTGGCACCATTTAGACATACAATTTCATTAGTGTTCGAGTTCAGATTCAGTGGAAAGGAAGAATCGGTTTAagtttgtgttgatttaatatatagaaataacattttgatgAATCTGACACTACAAAGCTTAATAGTTTACCCTTAAAATCTTGGGAATGTTCTTTTATTAGAATGTGGCATTTGATGAGGGTCATGTTGGACTGTGTCAAATCAATCTTCTACACTCTAGTTTTCAGTCAAAGCATTCTCGATAAGTACAAGGCAAATGGTTAATTTATAGTCTTTTAGttttaacacattaaattaTAGCCCTGTATAAGTTTATTGGAAATCCATGTATTACAAATCTCATAATGCTGATGTTACCAGTTtcaatattttttggtttgatttgtttgtaatGTGAAGATATAATAGAGATTAAGTGCATCTGAATTTCAAAGAACATGTCAAATGATCTTCCCAAGCAAAGCATAAAAGAGaatgcaagtttaaaaaaaaatggaagtgcATAAATGTCTGTTCGCATTGTGACGCACAGTATTTTGAAGGTGCAAGTACCACTAGGCCTATGTTTTCTGATTCTTTGAGTACGAATAACTTACTCCTCTGTTCACCATAAATCACAGCAGTTACCATTTCcaacttattttttcaaacactttAATCGTTTTGAGAGAAGGCAGCAGGTATAGTACTGTATTATGACCTGCTACTGCAGGGAAGTGCACTCACTGTCCAACAAACTGCTGAAATTCGTCTTGCTATAAGTTGGTACATTGATTTCAGGTATTACAATTAAAGCAGaagatttacacatttattagtTTAAATTTCAAAAGTTATAGAATCATTACAAATCAATAAGTTCAGTCCATTGCAATCAAAGAAAGGGATTGTTCAGGCACACCCAAAGGAGAGCTCTCTGAGTAGAGAGACAAAGGCAGCTTTGTTCTGTAATCGTGGTGAAGGGAACTGAATGCAGTCTAATGAGGTCATAAGATAGTGTCGTGCATGGGTAGAACTGAATAGCAAAAGATTGCTGTGGGGGCCGGTTAATACATGGAGTTGTCAACAGTTGTCTTGGCATGACTATTTGATCCAAAATACagtttatgttcttattttgttgTAAGTATAGtaggaataaaatatttttaaaagtatgtttGGTTTTGTTGCACTAGtgtattgtttcattgttttttatgttcatattacTAGACATGTGGCATCCTTGATCTCATCCTCTAAGTCTGTGGTCTTCAATCCCTGGAGGGccatgtgtatgctggttttcaatCCAATAGACTccttcaattacttaattggtctaattgtttaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007634 True 2710 mRNA 0.45 4 24251466 24256041

Neighbor

gene id symbol gene type direction distance location
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding downstream 64576 24150344 ~ 24186890 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding downstream 103445 24114555 ~ 24148021 (-)
AMCG00007629 NA coding downstream 150793 24078152 ~ 24100673 (-)
AMCG00007625 NA coding downstream 196376 24052472 ~ 24055090 (-)
AMCG00007624 vps33b coding downstream 206094 24032553 ~ 24045372 (-)
AMCG00007644 ppip5k1,LOC105015023 coding upstream 112590 24368631 ~ 24403122 (-)
AMCG00007648 NA coding upstream 207686 24463727 ~ 24464347 (-)
AMCG00007643 NA coding upstream 214994 24471035 ~ 24479836 (-)
AMCG00007645 NA coding upstream 227971 24484012 ~ 24495209 (-)
AMCG00007647 rlbp1 coding upstream 290491 24546532 ~ 24550224 (-)
G25079 mfap1 non-coding downstream 201030 24050148 ~ 24050436 (-)
G25078 NA non-coding downstream 201393 24049815 ~ 24050073 (-)
G25077 NA non-coding downstream 201682 24049553 ~ 24049784 (-)
G25076 mfap1,LOC102796914 non-coding downstream 202029 24049224 ~ 24049437 (-)
G25075 NA non-coding downstream 202986 24047660 ~ 24048480 (-)
G25175 NA non-coding upstream 91058 24347099 ~ 24347419 (-)
G25176 NA non-coding upstream 93989 24350030 ~ 24354310 (-)
G25177 NA non-coding upstream 112128 24368169 ~ 24368373 (-)
G25239 NA non-coding upstream 177039 24433080 ~ 24507819 (-)
G25248 NA non-coding upstream 242324 24498365 ~ 24542158 (-)
G25026 NA other downstream 278801 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 831163 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1675012 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1893020 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3778547 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 6649 24262690 ~ 24281564 (-)
G25422 NA other upstream 1008291 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1374751 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1797723 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3101690 27357731 ~ 27370519 (-)

Expression


Co-expression Network