AMCG00007635 (iqgap1,LOC106562619,LOC107730269)


Basic Information

Item Value
gene id AMCG00007635
gene name iqgap1,LOC106562619,LOC107730269
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24150344 ~ 24186890 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007635
ATGCACAGCGGCAGactacaaaaacacattgtaataAGCACGTCAGCCGGGGATCTCGGACCGGCCAGTGCCCAGGGCGGGCAGCAGGGGGCGCCGCTGGCCGGGCGGGCGAGACGAAGAGACGAAAAGACGAAAAGACACCCAGGCGCTGCAGTGGAAGAGCGAGGGGGCCAGGGCGCCTCCCAGACCGAAGCTTGTCGCAGGACACTGACCGACGCCAACCAACAGAAACCCGGACTGCGCTGGACAGGATCTTCAGCAAACATGTCAACTTCGGACGAGGCAGACGGGATCCGCCCGCGGTATGGGTCGGTCCTGGACGGGGTGGAGCGTCTCACGGCCGAGGAGATGGATGAGAGGCGCCAGCAAAACATGGCCTATGAGTACCTGTGTCACCTGGAAGAGGCCAAGCGGTGGATGGAGGCCTGTCTAGACGAGGAGCTGCCACCCACCACGGAGCTGGAGGAGGGTTTGCGCAATGGTGTCTACCTGGCCAAGCTGGGCAACTTCTTTGCCCCTCGCACAGTGTCCATCAAGAAGATTTATGATCGCGAGCAGACGCGTTACAAGGCGACCGGTCTCCatttcagacacacagacaatgtGATCCAGTGGTtgaacgccatgactgagattGGGCTGCCAAAGATCTTCTACCCGGAAACGACAGACATCTACGACAGGAAGAACATGCCCCGCTGCATCTACTGCATCCATGCTCTCAGTCTGTACCTCTTCAAGCTGGGTTTGGCCCCTCAGATCCAGGACCTGTATGGCAAGGTAGATTTCACAGAGGAGGAGATTAACAATATGAAGAGTGAGCTGGAGAAGTACGGCATTCAGATGCCCGCCTTCAGCAAGATTGGCGGGATCCTGGCCAATGAGCTCTCCGTGGATGAAGCTGCCTTGCATGCAGCAGTCATTGCCATTAACGACGCCATTGACCATGGGGTGCCGGAGGGGACTGTGGCCGCCATGCGCAACCCCAACGCCATGCTGCTCAACATCAACGAGAGCTTGGCCCAGCACTATCAAGACACGCTGCTCCAGGCCAAGCAGGAGAAAGTGTCGAATGCCAGGAACCGGATGGCAGGGGAGAATTCAGAGCAGGAGCGTGATGTGTACGAGGAGCTGCTGACCCAAGCCGAGATCCAGGGCAACATCAACAAAGTGAATGtGTCCAATGCCTTGGGTTTAGTGGAGCAGGGTCTGCTGAGTGGAGACGAGGACAAGCTGTATGACGCACTCCGCTCCCAGGCTTTGGGTCTGCGAGGTCTGCAGGTCCCAAACAAGCAGTGGTACCACAAGCAGCTCACTGGTGACCGGGAGAGCAAAGAGCAGAGTTACCCTGGAGAGTCGCTGACGAGGGATGAGCTACAGAGTGGAGTGGAGCTGGCCAATGAGGATGCAGCTAGCTATCAGAGACtgttgcAGGCAGTGCAGAGGATTAACGCTGCCATCCACGCGGGTGTGGCAGAGGACACGGTGTCAGAGCTGATGCACCCTGATGCGAAGCTGCCCCAGGTCTACCCCACAGCCTCGCAGCTGTACCAGCACGAGCTTGCCACCCTGCAGCTGCAGAgttcagagGGCACCCTGGCGCACGCAGAGTTGCAAGTTGCTGTGGAGATGCTGTCGTCCGTGGTGCTGATTAACAGAGGCCTGGATGTGGGCGACAGGCAGGCGGTGTGGAAGCAGCTGGAGAGCCCAGTCACAGGCCTCAGCAACGTGGAGGACGAGTGCGCCCAGAGGTACATGGATGAGCTGATGCGCTTGAAGGCGGCAGCACGGGCAGAGGGCAACGACTTCCTGACCTGGAATGACATCCAGGCGTGCGTGGACCTGGTCAACACCACCGTGCAGGAGGAGCACGAGAGGATTGTGGCGATTGGGCAGATCAATGAGGCTCTGGATGAGGGAGATGTCCAGAAGACCCTGGCAGCCCTGCAACACCCAGCGGCCAAGCTGTCGGATGTGGACCCAAGTGTGGCCCAGCACTACTATGACAAGCTGCTGGAGGCCCGCAGGGAGAAGGCACACGAGACCCAGGACACCTCAGCTGTGCTTTGGCTGGATGAGATTCAGGACACTGTGCACGCCTCCAACAAGGACACCCAAGATGCACTGCAGTtctctcaggcCATATTATCAATTAACGAGGCAGTGGAACAAGGAGAGGCCCCCGTGACCCTGGCCGCCCTGCGCAACCCCAGTGCAGGGCTGTACGGTGTGACCCCTGAGTGTGCCCCGACCTACCAGAATGACCTGGCCAATGTCAAGCAGGGCAAGAAAGTGGAAGGTGAAAACGGCAGCGAGTGGATGAAAAACTGGGTGAAGGGGGGACACAATTACTACTTCAACCTTAGCACAGGAGAGGGCACTTGGGATGAACCACCCAACTTCGTCCAGAACAACACCCAGCTGAGCAAGGAGGAGATCCAGTCCGTGGTGTCTGGCGTCACCAGCGCCTATAACCGGGAGCAGCTGTGGCTAGCCAATGAGAGTCTGATCAGCAAGCTGCAGGCACGCTGCCGGGGCTTCATGGTGAGGGATGGCCTGAAGAAGCGCCTCGACTTCCTGAAGGAGCAGGACCCCGCTATCACGTGCATCCAGGCTCACTGGAGAGGCCAGAAGCAGAGGAAGAACTTCCTGGAGAGGAAACAGTATCTGAAGGACCACACTGATGAGACTATCAAGATCCAGTCAATGGTGAGGATGCATCAGGCCCGCAAGAAGTACCAGGACCGGCTGAAGTATTACAGAGACCACATGGATGAAATTGTAAAAATCCAGGCGTTCATCCGGGCCAACAAAGCCAGGGACGACTACAAGACTTTGATCAGCGCAGAGGACCCCCCGATGTCGGTGGTTCGGAAGTTTGTCCACCTGCTGGACCACAGTGACCAGGACTtccaggaggagctggagcttATGGGGCTGCGAGAGGAAGTGGTCACCAATATCCGCTCCAATCAGCAGCTGGAGAACGACCTCAACCTCATGGACATCAAGATCGGCCTGCTGGTGAAGAACAAGATCACCCTGCAGGAAGTGGTGTCTCACAGCAAGAAGCTGACAAAGAAGAACAAGAGTCAGCTGTCagacatgatgatgatgaacaAGCAGGGGGGGCTGAAGGCTCTGAGCAAGGAGAAGAGAGACAAACTGGAGGCCTACCAGTATCTCTTCTACTTGTTGCAGACAAACCCCACCTACCTGGCTAAGCTGATCTTCCAGATGCCCCAGAACAAATCCACCAAGTTCATGGATTCAGTCATCTTCACTCTCTATAACTATGCTTCCAACCAGCGTGAGGAGTACCTGCTCCTCAAGCTCTTCAAAACTGCTCTGCAGGAGGAGATCAAGTCAAAGGTGGACCAGATCCAGGAGATTGTGACGGGCAACCCCACAGTCATAAAGATGGTGGTGAGCTTCAACCGGGGGGCGCGCGGGCAGAATGCTCTGCGCCAGATCCTGGCCCCCGTTGTCAAGGAGATCATGGACGACAAATCGCTGAACATCAAGACCGACCCTGTGGACATCTACAAGAGCTGGGTCAACCAGATGGAGTCGCAGACCGGCGAAGTCAGTAAGCTTCCATACGATGTGACTCCTGAGCAGGCCATGAGCCACGAGCAGGTGCGCAGCCGGCTGGATGCCTCCATCAAGAACATGAGGACCGTCACTGACAAGTTCATGTCGGCCATCATCGTTTCTGTGGACAAGATCCCGTATGGCATGCGGTTCATTGCCAAGGTGTTAAAGGACACTCTACACGAGAAGTTCCCCGATGCTACTGAGGATGAGCTGCTGAAGATCGTGGGGAACTTGCTGTATTACCGCTACATGAACCCTGCCATTGTGGCGCCGGATGCCTTCGACATTATCGATATGTCAGCAGGGGGGCAGCTGACCACTGACCAGCGCCGCAACTTGGGCTCTATCGCCAAGATGCTGCAACATGCGGCCTCCAACAAGATGTTCCTGGGAGACAATGCCCACCTCAACCCCATTAATGAGTACCTGAGTAACTCCTACCAGAAGTTCAGGCGATTCCTGCTGGCGGCCTGCGATGTGCCTTCCTTGGAGGACAAGTTCAACGTGGACGAGTACTCGGACCTGGTCAACCTGACCAAGCCCGTGATCTACATCTCCATTGGGGAGAtcatcaacacacacacgCTGTTACTGGATCATCAGGACGCCATCGCTCCAGAACACAACGACCCAATCCACGAGCTGCTGGAGGACCTGGGGGAGGTTCCCACCATAGAGTCCCTCATCGGCGAAGGCACACTGCCCGCCGGCGACCCCAACAAGGAGATGTTGGGCAAGACAGAAGTGTCCCTGACCCTTACCAACAAGTTTGACGTCCCAGGCAGCGAGAATGCAGAGATGGATGCCAGGACCATCCTACTGAACACCAAGCGCCTCATAGTGGATGTGATCCGGTTCCAGCCTGGGGAGACCCTCACCGAGATCCTGGATACCCCTGCCTCCCCCGACCAGGAAGCAGAATACCAGCGGGCCATGCAGAGGAGAGCCATCCGGGACGCGAAGACGCCTGAGAAGATGAAGCAGAAGAAGCCGGTGCAGGACGACACCCTCAGCCTGCAGGGCAAGAAGGAGAAGATCCAGGGCAACCTGAAGCGCCTGGGAGAGCTGGGCAAAGTCAACGCAGAGAACCGCTACCAGGACCTCATCAATGACATTGCCAAGGATATCCGGAATCAGCGGCGGTATCGTCAGCGACGGAAAGCTGAGCTGGTGAAGCTGCAGCAGACCAACGCCGCCCTCAACTCCAAAAGCAGCTTCTTCAACGTGCAGATTGACTACTACAACCAGTACATCAAGACCTGCATGGACAACCTGGCCAGCAAGGGCAAGGTGTCCAAGAAGCCCGGCGAGGTGAAGGCCAAGAAGAGTAAACAGGTGTCTCAGAAGTACACTGCCGCCCGGCTACACGAGAAAGGAGTGCTGATCGCCATCGAGGACCTGCAGGCCAATCAGTTTAAGAATGTCATCTTTGAGATCTCTCCATCAGAGGAGGTTGGAGATTTTGATGTGAAGGCCAAGTTCATGGGTGTGCAGATCGAGACAGTGGTGTTACATTACCAGgaccTCCTCCAGCTGCAGTACGAGGGGGTGGCCGTGATGAAGCTGTTCGATAAAGCCACCATCAACGTCAACTTGCTCATCTTCCTGCTAAACAAGAAATTCTACGGCAAATAAATGACcaagaaagagagtgagagggggGACATAGACACTGTACAAAGACCCACCCCAGCCCCCTTCACACACACCTGAAAGAAGACATTTCTGTCCTTGTCTTCAGCCCTTTGACCTCTCGGGCCGGCTCTCAGAGCACAGTGTCCACACTCTCCTCATTGGCTGACTACAAGACCTCGCCTGACCATTAAGCTTCTGGGACCTATGTGTCCCTCAGGTAGTGTTTAGATCTTATTTTAGATCTTACCAAGTTATGTAGGCTGAGCATGTTGTCTTGCGATACATGGCACCCAGGCATACCATGCTGGGAGCATATTAGCTATTAGCTAATGCGTTTGGCCTGAGCCTGCTTTTGGCTTTGGAGAGCTGCAGGCCAAACGCTGACCCCTGACCTTTGTAAGTGACTGGGCCCTGGGCCTGATTTGGTCCTAATAAGGTCCAACAACTGGGAAACTGCAGAGAGTGCAGCCCTAATGCAGTTGTTTCCGTTGTCACCCCTtctcgtctctctctccagtgagAGGGCTCAGGTGTGTGGAGGAGACTGGGTGTTGTGCAGTACGaatgccctctctctcctctctcctcctcttcagcCCCCACCCCTGCCCCCGTGATTCTTCTTTCACTCCTGATGTAAAGTATTGTCCAAGAGGAAGGTCCACAGGAAAAGGAAATGACCTTCCTCCTCGTGTTCCTGCTTCAGCAGACGCAACGTGTCTGTTTATCAGGCATTTTATTGTCCATTTTctaaatggattttttttttcttttttttgcttgtttacccatattatatataaaatgacacCACATTGTGTGagttggaaaagaaaaagaaactatTTTAAGAAACACTCTTAACTGTTCATTTTGCAGGccttttatatttatgaatttatgaatCTGGACGAACACCCAGAGAGCTGGACAGAAGTTTAATCTCGTGTGCTCAGGAGATGGATCATTAATTCTGAAATCTAGTGTAACATTGTTTGATAATATGCAAATGGTTATATACCCTgaaattccccccccccccaccagatTCTTTAGAATAGGAAATCGCCCCCATCCAGTGCAGGGGACTGACGGGCTGATCCAGCTGGTCCATTCCATGTCTTTGAGAGAGGCATCAAGGCAGAGCTGGCCGGTTCAGTGCTGTACAGAGCGATTACATGtcctttcttgttttcttcaaataaataaagtactgtcttaatttaaaacatttaatttttttttttttgcaaacatcCACACTTCTATGTATGACTTAAAGGGGAGTGGGATTCTTACCACTTAGTGGAAACCAGTTTCCTCTGTCCTCCTCATAGCTGAGAAGGGTTTAAACTAATGGGACTTGAGTTGTACAAAAATTGTGCACAGCTCACACTACCGCCCCCTCACTGATGCCACATTATTGCCTGGATTACTGTATCACTGTTGCAAAGCAGAAACTGTTTATCTTTCCTGTTCAACCCATTTTGCTGAGAACCATTCATAAACTTCAATACGTGTACAGTATTATAGCAAGAATGACTGCAGTTGCAACTATAGGCCACAAGGTGTCACCCTACGTGAAGTTTGCAAGGTGTTGCAGTTGTTTGGGTTCGCTGGGCTTCCAGGCAGTAATCTGATTTTTCTGTCAAAGGTGTTCACAATGAGCTGACGGACCAGTGTACCGCAGTCCTGAGGCGTTCTGGAAAAGTCTCCCTTGTATCACTCCATAGGATGTAGTTATATTCTTAAGAAATACGTTTGTTCTTTTGCACTGTTTTCACATTACCTGGCGTGCCTTCAGtataaaaatgaaacttttaACAGTaccaaataaaatatctggaaaaGA

Function

symbol description
iqgap1 Predicted to enable GTPase activator activity; actin filament binding activity; and calmodulin binding activity. Predicted to be involved in regulation of actin cytoskeleton organization. Predicted to act upstream of or within regulation of GTPase activity and signal transduction. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including cardiovascular system; ectoderm; gut; perichondrium; and pharyngeal arch. Orthologous to human IQGAP1 (IQ motif containing GTPase activating protein 1).

NR:

description
PREDICTED: ras GTPase-activating-like protein IQGAP1

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K16848 IQGAP1; Ras GTPase-activating-like protein IQGAP1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007635 True 7084 mRNA 0.53 39 24150344 24186890

Neighbor

gene id symbol gene type direction distance location
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding downstream 2323 24114555 ~ 24148021 (-)
AMCG00007629 NA coding downstream 49671 24078152 ~ 24100673 (-)
AMCG00007625 NA coding downstream 95254 24052472 ~ 24055090 (-)
AMCG00007624 vps33b coding downstream 104972 24032553 ~ 24045372 (-)
AMCG00007626 NA coding downstream 119774 24022553 ~ 24030570 (-)
AMCG00007634 NA coding upstream 64576 24251466 ~ 24256041 (-)
AMCG00007644 ppip5k1,LOC105015023 coding upstream 181741 24368631 ~ 24403122 (-)
AMCG00007648 NA coding upstream 276837 24463727 ~ 24464347 (-)
AMCG00007643 NA coding upstream 284145 24471035 ~ 24479836 (-)
AMCG00007645 NA coding upstream 297122 24484012 ~ 24495209 (-)
G25079 mfap1 non-coding downstream 99908 24050148 ~ 24050436 (-)
G25078 NA non-coding downstream 100271 24049815 ~ 24050073 (-)
G25077 NA non-coding downstream 100560 24049553 ~ 24049784 (-)
G25076 mfap1,LOC102796914 non-coding downstream 100907 24049224 ~ 24049437 (-)
G25075 NA non-coding downstream 101864 24047660 ~ 24048480 (-)
G25175 NA non-coding upstream 160209 24347099 ~ 24347419 (-)
G25176 NA non-coding upstream 163140 24350030 ~ 24354310 (-)
G25177 NA non-coding upstream 181279 24368169 ~ 24368373 (-)
G25239 NA non-coding upstream 246190 24433080 ~ 24507819 (-)
G25248 NA non-coding upstream 311475 24498365 ~ 24542158 (-)
G25026 NA other downstream 177679 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 730041 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1573890 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1791898 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3677425 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 75800 24262690 ~ 24281564 (-)
G25422 NA other upstream 1077442 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1443902 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1866874 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3170841 27357731 ~ 27370519 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035082 iqgap1 coding NC_007118.7 CM002891.2 50641919 ~ 50764714 (-)
grasscarp (Ctenopharyngodon idella) CI01000345_01642976_01686749 IQGAP1 coding CI01000345 null 1642976 ~ 1686749 (+)