AMCG00007637


Basic Information

Item Value
gene id AMCG00007637
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24262690 ~ 24281564 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007637
CGGGGAGTTGCATTGTGGGGTGCATACCAAAGGCAGGGTCCAGGAGCCGAGTGCAACCAGTCTGTGTAGCTGCTGCCTGTACCTGCCCCTGAATGGAGCCCGGAGGCAGTGAGCTGGATCCCAGCCTCTCGCAGCAGGACAACCCTTGCTTGATAGTGGAGGACTCCCAGCCGGACAGCGCCGCCCTAGAGGAGGATCCGGAGAGCGGTTATCGCAGCTTACTGGCAAAGCGTCTCTCCAGCCTGCAGCCTCACACGCACAGCCCTGTGCTGGAGCTGATTTCATCTCCGCCAGGCAGCAAAGGCTCTGTGGGGGACAGCCAGTCAGAAGAGGGGCAGAATGACGGGCACCCCAGCTCAGCAACATTGGACTCCAACCAGACTTCTGGCCATGAGAAACACAGTCAGGTGTTTGAAGTGTGCTCTCCCACAAGTCAGAGGAGGGCCGCAGCTACCGTGAACAGCCAGTGTGCTGGCGAGGATGACGCTGACTCCACCACACACTGTGCCCAGTCTGAAGAGGCATCCCAGTTTGGTTTCCTGGAGCTGTCTGAGAGTCAGGGTCTGGGAGGGAAGATGGAGTGGAGCATGGAGAGCCAGGAAGAACCGACAGACGCCACAGAGGGACAGACTGACAGTCCCCAAAAGCAGACGAAGCaaaCCGGAGGGGAGAGTGCAACGGGAGGAAATAGCCAGTCTTCAGACAGACAAGATGACGTAGCCAAAAGGTCTGAGGTGACCTCCAGCTGTCCTGCAGAGCCACAGCCTGGGAAACCGTCTAGTGAGAAGAAGGAGATGAGCATTCACCACCTGTTGATGGGCCAGGGGTCTGAGGTAGAAGAGCACGAAGAGGACGAGGAGGTTCTCTCTACTCAGGAGGACATGTTTGACCAGGACAGGACAGCATCTACTCCTGCCAACAGCCTCCAATTGCTGCACCTCTCCGGGCAGACCACCCTGGTCCAGGAGAGCCTTTCCCAGAACTCAATTGAATTCGTAGCCCCCACTCAGGACACGTTTGGCCCGACGCCCATTATTGTGCCCAGCTCCCCCACGGTGCAGGACCATGAGCAAGCTGATGATGAACCTATGGATACTTCCCTCCCTCACGAAGAGGCTGATCAAGCACAGAAGAAGGAGGAAGAACCAATGGAAACTGACCAGCTTCCTGCCCCATCAGGAGACACTGCTCCTCAAGCTCCCCTGGCCTCAACTCCAGTATCCCAGAATTCCCCAGGTTTTGTGCTGGAGCGGTCTCTTCCGGTGCCAACCCAGCCTGAATTCTCCCACGACATATTTGTCCCCACACCGAGCTTGGAGGCaggcagcagtagcagcaggaGCAGAGGCACAGAGATGGACCGTAAGAAGACATCTCCCAAGGAGAGCCCCTCAAGGCCAGTGGAGGCTGAATGTAATGAAGACACTCAGGCAGAAGCCATGACGCAGGAGCAGCACAAAGAAACACTTCTCGGCCAATCAGAGCCTAGTGTTCCAGAGGAATCATTCCGGTTGGAGCTTTCCACAAACGGTGAGCATGCAACGCTTCCCCAACGAACACAAGAACCGGAGCAGGAGGAGGACGAAGAGGATAGTCAGTTAACACAGATAGAGGAGCTGGAGGGTGTCGTAGGCCCTGTTACCAATGACTCCACCCCCGCtccagagagacagaaacatgAGAGAGACTTGGCTGAAGTCCCTGTAACACTGGAGCCAAATAACACTACTAGTTCGCCAAAAGCTCTTGAGATAGCTGCCTTAGTTAAGGCTAGCGTTTTTTCTGACAGGCCTGAAGTGCACCCCCCCAAGAACACAAGTGCAGAGAATGCTTCAGACAAAGCTAACCCTGTGCCAGATGTTTCCACCACAGTTGCCTCATCCCAAGACAAGACTTTACAGAAACCACCAGAAATCATGGACCTGACTTTAACTGGAAGTTCCAAAAAAACAGAATCTGCAACCACAGCCAATACCACCAGTTCCCACCAGGAACTTGAAACCATAGACCTGACCAGTGCCAGTAGCTCCCTAGAAGTTCCTGCATCAGGAGCAGACATTCCTAACACCACCAGCAGCTTGCTGTCcacccctgcccctgcccctgcctcTGCCCCTGCAGAGTCCTCTGCTGTATCTCCAAAGGATGTGGATACAGACCCTGGGACCCCAGAAGAGGCTATGGAGGTCCAACCCAGGAGTGCTGAAGCTCCTGAAGAATCGGAGCCTAGAGAAGCGGTCTGCACCAAGGCTGCTTCACAGGAGTTGGGGCACGGGGTTGAGAACACTGAGAAGGATGAAGATGTGGTCGATGAGACCCCAGAGGAAGAGCAGGTGTTgatggaagagggagagaaagagaaggagaaggaggtggGGGGAGCTGAGGGTTCAGGTCTCTGCTTTGCCCTGTCCCAGAGCCAGGTATTTACCCCGGAACCAATGGAAGAAGGACATTCCTCCTCTGAACCTGAGGAGCAGAGCATCTTGAAGCAGGACAGTCCTACTAGGATGGAAGAGCAGAGTGTCAGAGAAGAGCCAGACCCCCCCAGCAGTGTGATTGTGGTGGAGGACAGTGAGAGAGACTCGCAGCTAAACAACAAGGACATTGCAGTCAAGGTGGTTGCTGCATCATCCCAGCCAGTCGTTGTTGACTCCACCCAGGACTCGGACAGTTTGCTTGGTGTTCCAGAAAGTTCTCGGGAAAAAGGGAATGTGGTGGAAATTACAGAAGAGAGGCCTGTACCTTCCAGTAATGGCACTGGGCCCCAGAAAGAGGATATGACCCCATCCACAGAGAAGTCCTCAAAACCAGAGGAAACGGCTGTACAGAACAACAAGGTTGTGGACACAGGCAGCCTGAAAGACTCTGAGGGTACGAATGTGGGGAACTCTTCTAGCAAAAGCCTGAGTGACAGCTCTGGGGAAATCCCATTTCACTTTACTCTTCCCAAGGAAGGAGAGCTGATTCGCCCAGCAGCAAGTGCTACACCTCCTCTGATTGGCCAGCTAAAGCTGACTCCCCGACACAGTACTCCTATCGAGGTGGGATCGTGCTCTGAGAGAACTATGGCTACTGGCGATGTCACCAGAGAGACTGCTATGGCTACCAGTGATATCATGGCTGAAGAGAGTGGAGGAGAGGGTGTCAAAAGTGACTCTGCCTACACCGCCGCAGCGCCTGATGGGAAGCTGAGCCTGAGGATGAAGCTGGTGACTCCAGTGAATGAGGGCAGTCCAGAGTCCCCTCGCTTCAGTCTGCAGAAACCGGCGTTATCTGAAGAGGAAAGCTCTGTTGCCACAGCTACCACTGTTGCTAAGGCTGTATCCAGTCCCCTGCACAGTGCATCAGTGTTCAGCCGGGTGTGCGAGGTGCGCCGACAGGTGGACGCCACAGGGAGGGGACAGCCCAGTACGCCCACCAGagggGACCTGTTCAGCTCACCCCTGCCTCAGGAGGGCGAGCCTGCAGGGGAGGGGCAGAGAATAGCACGGCTCAAAAACCCACCCTGCAGCCACACTCCCCTGGAGCCTGGCCAGCCAGAAGAACCGTCACCCAGCCCACGGAAGGAGAGGGCGGGCCCTGGTGgcctgctgagagagagggcACAGCGGCTCAGCGTCCGGGAGAAGGAGATCCAGACCGAGGCGCTGGTGCCCAAGTGGGCAGAAGAGGCCGCCACACAGACTGAAGGCAGACTGGGGATCGTTGTTGAGGAGGAGAGGTGCAGCGCTGGGGTACAGACTGAGGCTTCCTCTAGGGCCCAGCTGAGACAGAGAGCAGTGTCCCAGCAGACCAGCTTTGATGCCGGGAATGCCTCCAATGCTCCCAGCAAGCTTCGTCAGAGAGCCGTCTCCCAGCAGACCAGCTTCGACAGCAGTGGGCCCCAGAACCTGCTTGGCAAGGGAGATATGGAGTCTCCCCCACCACGCACCACCCCAGGGCAGTCTGTCCGCAGACACGTGCGCACGATCCGGGAGGTGCGGACCATAGTCACGCGCATCATCACGGATGTATATTACGAGGACGGGAGGGAGGTGGACCGCACTGTTACAGAGGAGTCCGAGGAACCGCTTGTGGATTGCCGTGTGGTGGAGAGCGATGTGTCCCCGTCACGCACCGCTGGCTCCATGACTTCCGGTGACCTGGGTGACGTcagctctctctcctccaaGACGCCCAGCCTGCAGCGCAGCTCCAGCGGGGCCAGCAGCATGGGGGCGGGACCTGCCAGGAGAGTGGGGTTTGAGGACACTCACATGGACTTCATCATGCCCCCCAGCCGTGGTGGTGCCTCCGCTAGGCTCGCTAGCCCTCGGAAGGCGTTTGGTCAGCAGCAGGGAGCCCCAAGTGGGCTGGGTGGGCCCGAGGGGACggtggacagagacagagcacCCCTGACCCCCCTGACACCCCGCGGAAGGGCGCGACGAGGCAGGCCTCCGTCCCGTACCCTTGTCTCCAGGGAATGTGGGACGCCCACATCGAGGGACGGTGCCCGAGGTCTGCCCAGCTCTTCCTCTGAGGAGGAGGTCTACACGCGAGTGTCTGCCCGTGTGTCGGAGAGCCCCCCTGAGCGCGGGACCCTGCGGCGCTCCGACTCCCCCGAGCTTGGCGTGCTTGCCCCCGTGTCCCCCGATGCCAGTGGAAGCTCCAGCAGCTTTGTGGGGCTGCGCGTTGTTGCCAAGTGGTCGTCCAACGGCTATTTTTACTCCGGCTGCATCACCCGTGACTCGGGCGCTGGCCGCTTCCGCCTGCTCTTCGATGACGGCTATGAGTGTGACGTGCTGGGCAAAGACATCCTGCTGTGTGACCCCATCCCCCTGGAGACCGAGGTCACTGCCCTGTCTGAGGACGAGTATTTCAGCGCAGGCGTGGTGAAGGGCCATAAGACAGAGGGCACGGACTTCTTTTACTGCGTGGAGAAGGACGGCCAGCGGAAGTGGTACCGAAGGATGGCTGTCATCCTGTCCCTGGAGCAGGGCAACCGACTGAGGGAGCAGTTTGGCCTAGGCCCCTATGAGCCCGTCACTCCCCTCACCAAGGGCTCCGACATCAGCCTGGATAACCTGGTGGAGGGGAAGCGGAAGCGCAGAGGGAACGCGGGGGGCAGTGGGACCCCCTCCCGAGGTCCCAATGACAGCCCTAGAGGCACGGGGAATATGGGCAAGCGGAAGCTGATTAACTCACCCGAGGAGGACAAGTGTCCCGCCAAGAGAGGGCGAAAGTTGGCCAGTCCTAAAACCGGTATGGACACCCCACCCGGGCGGCGTGCAGAGATATGCAACACCTCTGAGAGCGGCCCTGAGCTGCCCTCTGACCCCGCTGACCTGGTGGACTCCCACGGCCCCCTGCCTCGCAGCAGCTCGCTCTTCCTTGGCTACGCCTTTCTGTTGACGTCCTCCACAGACATTGACCGTGACACCAACCAGCTGGGcagtgagggagaggaggAGTATGTACAGACAGCCCCTTACAACAGGCGTTACACAGAGAGTCAGCTAAGAGCGGGAGGGGGCTACATCCTTCAGGACTTCAACGAGGGACAGTGTAATGCGGCCTATCAGAGCCTCTTGATCGCAGACCAGCACTGCCGCTCCAGGAAGTACCTACTCTGCGTGGCCAGCGGCATCCCCTGTGTCTCGCACATGTGGGTGCGGGATTGCTCCCATGACAACCAGCTGCTCAACTACAGGAACTACCTGTTGCCAGCAGGACTGGGGCTGCCGGAGAACCGCATCGTGGAGTGGCACCCTCGCCGCAGCCCATTCCAATCCCTGCAGGTCCTGCTGGTCTCTGACTGCCCTCTGGAGCTCTGGGCAGACCTCCTGATGATGGGCGGAGCCTCCTCGGTGCGTCAGCATAAAGTGGAGGCCAATAGCCAGGAGATTTCAGTGGGTGTGTTTGATTTGCTGGTGACGGACAGCTCGTGCCCAGCCTCGGTGCTGAAGTGTGCCTCGGCGCTGGACCTGCCCGTGGTGTCTCCCGAGTGGCTGATCCAGAGTCTGATTGCCGGGGAGCGCCTCGGCTATGACAGCCACCCCAAATACAGACACGACTACACCCCCACCTAACGCTGCCCTCTCCCTGCCCTTCACACCCTGCTTTCAGATATCCTTTTAGAGCCTTTTAAAACGTCCTGTGTTTGTAATAGTTCTGGTGCATGTCTTTCCTGTATATAGTTTTATCCCTc
>TU31562
gtctcctcAGCCCTCGGAAGGCGTTTGGTCAGCAGCAGGGAGCCCCAAGTGGGCTGGGTGGGCCCGAGGGGACggtggacagagacagagcacCCCTGACCCCCCTGACACCCCGCGGAAGGGCGCGACGAGGCAGGCCTCCGTCCCGTACCCTTGTCTCCAGGGAATGTGGGACGCCCACATCGAGGGACGGTGCCCGAGGTCTGCCCAGCTCTTCCTCTGAGGAGGAGGTCTACACGCGAGTGTCTGCCCGTGTGTCGGAGAGCCCCCCTGAGCGCGGGACCCTGCGGCGCTCCGACTCCCCCGAGCTTGGCGTGCTTGCCCCCGTGTCCCCCGATGCCAGTGGAAGCTCCAGCAGCTTTGTGGGGCTGCGCGTTGTTGCCAAGTGGTCGTCCAACGGCTATTTTTACTCCGGCTGCATCACCCGTGACTCGGGCGCTGGCCGCTTCCGCCTGCTCTTCGATGACGGCTATGAGTGTGACGTGCTGGGCAAAGACATCCTGCTGTGTGACCCCATCCCCCTGGAGACCGAGGTCACTGCCCTGTCTGAGGACGAGTATTTCAGCGCAGGCGTGGTGAAGGGCCATAAGACAGAGGGCACGGACTTCTTTTACTGCGTGGAGAAGGACGGCCAGCGGAAGTGGTACCGAAGGATGGCTGTCATCCTGTCCCTGGAGCAGGGCAACCGACTGAGGGAGCAGTTTGGCCTAGGCCCCTATGAGCCCGTCACTCCCCTCACCAAGGGCTCCGACATCAGCCTGGATAACCTGGTGGAGGGGAAGCGGAAGCGCAGAGGGAACGCGGGGGGCAGTGGGACCCCCTCCCGAGGTCCCAATGACAGCCCTAGAGGCACGGGGAATATGGGCAAGCGGAAGCTGATTAACTCACCCGAGGAGGACAAGTGTCCCGCCAAGAGAGGGCGAAAGTTGGCCAGTCCTAAAACCGGTATGGACACCCCACCCGGTGAGCAAGGAGATAGCTGACAATAAGCAagacccccccgccccctttaaatgtttcagtgtgGAGATTTTAATgggatgcattttaatgtttcttttataaCTACGTTTCATGCTTTTATCAATAAAATGAATTGGATTTTA

Function

GO: NA

KEGG:

id description
K20915 TP53BP1, P202; tumor suppressor p53-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007637 True 6193 mRNA 0.58 29 24262690 24281564
TU31562 False 1106 TUCP 0.61 4 24265824 24267921

Neighbor

gene id symbol gene type direction distance location
AMCG00007634 NA coding downstream 6649 24251466 ~ 24256041 (-)
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding downstream 75800 24150344 ~ 24186890 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding downstream 114669 24114555 ~ 24148021 (-)
AMCG00007629 NA coding downstream 162017 24078152 ~ 24100673 (-)
AMCG00007625 NA coding downstream 207600 24052472 ~ 24055090 (-)
AMCG00007644 ppip5k1,LOC105015023 coding upstream 87067 24368631 ~ 24403122 (-)
AMCG00007648 NA coding upstream 182163 24463727 ~ 24464347 (-)
AMCG00007643 NA coding upstream 189471 24471035 ~ 24479836 (-)
AMCG00007645 NA coding upstream 202448 24484012 ~ 24495209 (-)
AMCG00007647 rlbp1 coding upstream 264968 24546532 ~ 24550224 (-)
G25079 mfap1 non-coding downstream 212254 24050148 ~ 24050436 (-)
G25078 NA non-coding downstream 212617 24049815 ~ 24050073 (-)
G25077 NA non-coding downstream 212906 24049553 ~ 24049784 (-)
G25076 mfap1,LOC102796914 non-coding downstream 213253 24049224 ~ 24049437 (-)
G25075 NA non-coding downstream 214210 24047660 ~ 24048480 (-)
G25175 NA non-coding upstream 65535 24347099 ~ 24347419 (-)
G25176 NA non-coding upstream 68466 24350030 ~ 24354310 (-)
G25177 NA non-coding upstream 86605 24368169 ~ 24368373 (-)
G25239 NA non-coding upstream 151516 24433080 ~ 24507819 (-)
G25248 NA non-coding upstream 216801 24498365 ~ 24542158 (-)
G25026 NA other downstream 290025 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 842387 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1686236 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1904244 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3789771 20462504 ~ 20472919 (-)
G25422 NA other upstream 982768 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1349228 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1772200 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3076167 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 4613129 28894693 ~ 28921123 (-)

Expression


Co-expression Network