AMCG00007639


Basic Information

Item Value
gene id AMCG00007639
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24572886 ~ 24574030 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007639
aCTAACTTCCCCTTGGCTGAGTTCATCATGGCGTCAGGCTTCTTCCTGGTACTGATTCTGGAGCGGCTTGTCCTGAACTTCAGTGTGCAGAGAAATGAGGAGACCACTCCCCTAATACACTCTGCAGACCACACCCACAGCCACCACCACGGTGACCCGGAGAGCAGCGGGCACCACGTGCACGTTGACTTCCACGCACACTCCTCCTTCCGGGCCTTCATGCTGTTCCTGTCCCTCTCGCTGCACTCTGTATTCGAGGGCCTGGCCATCGGGCTTCAGACTACCGAGTCTAAAGTGCTGGAAATCTGCACTGCGATCCTGGTCCACAAGAGCATCATCGTCTTCAGCCTGTCGGTGAAGCTGGTGCAGAGCGCTGTCAGGCCCCTGTGGGTGGCGGCCTATGTGGTAGTGTTTGCCTTGATGTCACCCCTGGGCATCGCCGTGGGGATCGGCGTGATAGAGGCACAGCTGGCGGCGGGCGCGCTGATTCAGGCCGTGCTGGAGGGGTTGGCAGCCGGCACCTTCATATACATCACCTTCCTGGAGATCCTGCCACATGAGCTCAACTCCCCTCAGTGGCAGCTGCTCAAGGTCGTCTTCATCCTGCTGGGGTTCACAGTGATGGCCGGCCTGTGCTTCCTGGGCTGA

Function

GO: NA

KEGG:

id description
K14709 SLC39A1_2_3, ZIP1_2_3; solute carrier family 39 (zinc transporter), member 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007639 True 648 mRNA 0.59 2 24572886 24574030

Neighbor

gene id symbol gene type direction distance location
AMCG00007641 LOC107733946,LOC107685211,LOC108428500,LOC107737001,LOC103353203,LOC107662289 coding upstream 36078 24522465 ~ 24536808 (+)
AMCG00007638 NA coding upstream 111481 24449322 ~ 24461405 (+)
AMCG00007636 map1a,LOC106584644 coding upstream 222939 24336561 ~ 24349947 (+)
AMCG00007632 tubgcp4,LOC107695351 coding upstream 310987 24256146 ~ 24261899 (+)
AMCG00007633 LOC106526729,LOC108249217,LOC107091076,LOC102219664 coding upstream 342301 24229522 ~ 24230585 (+)
AMCG00007650 NA coding downstream 5101 24579131 ~ 24586370 (+)
AMCG00007649 NA coding downstream 19266 24593296 ~ 24620644 (+)
AMCG00007653 LOC106562248,LOC105016086,LOC106587394 coding downstream 120492 24694522 ~ 24704573 (+)
AMCG00007654 NA coding downstream 142906 24716936 ~ 24738397 (+)
AMCG00007655 NA coding downstream 168904 24742934 ~ 24761289 (+)
G25209 NA non-coding upstream 8034 24554268 ~ 24564852 (+)
G25203 LOC105015055 non-coding upstream 82138 24484286 ~ 24490748 (+)
G25197 LOC105908101 non-coding upstream 99739 24471039 ~ 24473147 (+)
G25196 NA non-coding upstream 103119 24441297 ~ 24469767 (+)
G25148 cdkn2aip,LOC107757748,LOC107695352,LOC107730231,LOC107596431,LOC107701282 non-coding upstream 316973 24254790 ~ 24255913 (+)
G25300 NA non-coding downstream 243312 24817342 ~ 24861868 (+)
G25303 NA non-coding downstream 305335 24879365 ~ 24911371 (+)
G25302 NA non-coding downstream 360449 24934479 ~ 24941580 (+)
G25367 NA non-coding downstream 379095 24953125 ~ 24953328 (+)
G25405 NA non-coding downstream 741757 25315787 ~ 25321025 (+)
AMCG00007640 NA other upstream 73236 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 378405 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 902807 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1379365 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1433365 23133811 ~ 23139521 (+)
G25822 NA other downstream 3509792 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3864614 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 4108141 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 4326028 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4429065 29003095 ~ 29006379 (+)

Expression


Co-expression Network