AMCG00007653 (LOC106562248,LOC105016086,LOC106587394)


Basic Information

Item Value
gene id AMCG00007653
gene name LOC106562248,LOC105016086,LOC106587394
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24694522 ~ 24704573 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007653
aTATTTGGGGATTATTATCATTTTCAGCACCATGCCGTGGCGAAAAGATCTCTTTCTCACCATCAGTCAAGACACGTGAGGCTGCATAAGGAACCACAGGTGAAGTGGGCTGAGCAACAGGTGGTAAAAAAGCGGAAGAAGAGAGATATTTACACTGAGCCCACGGACCCCAAATTTCCCCAGCAGTGGTACCTGTTTAACGCTAATCACAGAGACCTGAATGCTAAAGGCGCCTGGGAGCAGGGCTACACTGGGAAAGGCGTTGTTGTGTCTATCCTGGATGACGGGATTGAGAAGAATCATCCTGACCTGATCCAGAATTATGACCCAGAAGCCAGCTATGACGTCAATGACAAGGACCCAGATCCCCAGCCCCGCTACACACAGCTCAACGACAAC

Function

NR:

description
PREDICTED: furin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007653 True 399 mRNA 0.50 4 24694522 24704573

Neighbor

gene id symbol gene type direction distance location
AMCG00007649 NA coding upstream 73878 24593296 ~ 24620644 (+)
AMCG00007650 NA coding upstream 108152 24579131 ~ 24586370 (+)
AMCG00007639 NA coding upstream 120492 24572886 ~ 24574030 (+)
AMCG00007641 LOC107733946,LOC107685211,LOC108428500,LOC107737001,LOC103353203,LOC107662289 coding upstream 157714 24522465 ~ 24536808 (+)
AMCG00007638 NA coding upstream 233117 24449322 ~ 24461405 (+)
AMCG00007654 NA coding downstream 12363 24716936 ~ 24738397 (+)
AMCG00007655 NA coding downstream 38361 24742934 ~ 24761289 (+)
AMCG00007660 NA coding downstream 76784 24781357 ~ 24783125 (+)
AMCG00007657 unc45a coding downstream 80719 24785292 ~ 24793741 (+)
AMCG00007659 NA coding downstream 90876 24795449 ~ 24799006 (+)
G25209 NA non-coding upstream 129670 24554268 ~ 24564852 (+)
G25203 LOC105015055 non-coding upstream 203774 24484286 ~ 24490748 (+)
G25197 LOC105908101 non-coding upstream 221375 24471039 ~ 24473147 (+)
G25196 NA non-coding upstream 224755 24441297 ~ 24469767 (+)
G25148 cdkn2aip,LOC107757748,LOC107695352,LOC107730231,LOC107596431,LOC107701282 non-coding upstream 438609 24254790 ~ 24255913 (+)
G25300 NA non-coding downstream 112769 24817342 ~ 24861868 (+)
G25303 NA non-coding downstream 174792 24879365 ~ 24911371 (+)
G25302 NA non-coding downstream 229906 24934479 ~ 24941580 (+)
G25367 NA non-coding downstream 248552 24953125 ~ 24953328 (+)
G25405 NA non-coding downstream 611214 25315787 ~ 25321025 (+)
AMCG00007640 NA other upstream 194872 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 500041 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1024443 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1501001 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1555001 23133811 ~ 23139521 (+)
G25822 NA other downstream 3379249 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3734071 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3977598 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 4195485 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4298522 29003095 ~ 29006379 (+)

Expression


Co-expression Network