AMCG00007658


Basic Information

Item Value
gene id AMCG00007658
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24804508 ~ 24805488 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007658
ATGGACCAAGGGCTGTTCCGATACTACCTCGGTGACTTGCCGACACGGATCTTACCGGGCCCACATCAATACGTGGCCCAGCTGAATATTCTTCGgggaaaagagagaagaaaaccaCAGGAAATACTGAGCATCCGCCAGGGCTTCGACGCGAAACAATTTaactttaacaaaatacatcCTTCTGAGATCATTTTTGAAATGCGTAAAGAAAACGCAGTTGATGCCATTGTAGGCAAGCCGTCTGCACAACCGCAGCAGTGTCCCGTCGCTGCAGAGGCCCATGGCAGAGCCCTGGTTGTGATTAACGTGAGCCCCCTGGAAATGGGCCACTGTCTGATAGTGCCCGAGCCCAGCAGCGGCCTCCCGCAGGTCCTCAGCGCGGCCGCCCTCCGAACTGGCATCGAGTCGGTTTTCTTGAGCGCCCTCCCTGCCTTTCGAGTCGGGTTCAATAGTCTGGGTGCCTTCGCTTCTGTAAACCATCTACATCTGCATGGCTATTACTTGAATCATAAACTCCGCATTGAATCCGCCCGCACCGAGCCCCTGGTTCCTCAAAAGGGTTTTCATCTCCTCCCAGATTTTCCGACTGGGTTTCTGTTTTATACAGAGGGCAGGGATTTGCAAACGATTGTCCACAGCATCTGTCGTCTCACGGACAGTCTGGTCGAGAGGAATATAGCTCATAATCTCTTTCTGACCCGAGGCTGCCCGCCGGGGGACTGCCCTGCTCCGGGGCCCACCTGGCCGGGGGTCCGTGTGGTTGTGTGGCCCCGGATCTCCTGCTTCGGTGCTAAAGAAGAAGCAGCATTTAACGTGGCTTTATGTGAACTTGCAGGACATTTGCCATTTAAGAACACGGAGGATTTCGAAACCATCACAGAGGACGACGTGAAACGCATAATCCAGAAGTACCTCCTTCCCGAGAAAGAATTTCTTAAACTGCAGTTAGAATTTATAAAGATGTTAAAAGAGTTTTAA

Function

GO: NA

KEGG:

id description
K15630 VTC2; GDP-D-glucose phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007658 True 981 mRNA 0.52 1 24804508 24805488

Neighbor

gene id symbol gene type direction distance location
AMCG00007659 NA coding upstream 5502 24795449 ~ 24799006 (+)
AMCG00007657 unc45a coding upstream 10767 24785292 ~ 24793741 (+)
AMCG00007660 NA coding upstream 21383 24781357 ~ 24783125 (+)
AMCG00007655 NA coding upstream 43219 24742934 ~ 24761289 (+)
AMCG00007654 NA coding upstream 66111 24716936 ~ 24738397 (+)
AMCG00007665 NA coding downstream 177185 24982673 ~ 24984023 (+)
AMCG00007664 NA coding downstream 179509 24984997 ~ 24988135 (+)
AMCG00007663 parp6,LOC106587213 coding downstream 210188 25015676 ~ 25035688 (+)
AMCG00007670 celf6,LOC104962849,LOC106911022 coding downstream 262573 25068061 ~ 25076698 (+)
AMCG00007669 celf6,LOC103138107 coding downstream 335442 25140930 ~ 25170375 (+)
G25209 NA non-coding upstream 239656 24554268 ~ 24564852 (+)
G25203 LOC105015055 non-coding upstream 313760 24484286 ~ 24490748 (+)
G25197 LOC105908101 non-coding upstream 331361 24471039 ~ 24473147 (+)
G25196 NA non-coding upstream 334741 24441297 ~ 24469767 (+)
G25148 cdkn2aip,LOC107757748,LOC107695352,LOC107730231,LOC107596431,LOC107701282 non-coding upstream 548595 24254790 ~ 24255913 (+)
G25300 NA non-coding downstream 11854 24817342 ~ 24861868 (+)
G25303 NA non-coding downstream 73877 24879365 ~ 24911371 (+)
G25302 NA non-coding downstream 128991 24934479 ~ 24941580 (+)
G25367 NA non-coding downstream 147637 24953125 ~ 24953328 (+)
G25405 NA non-coding downstream 510299 25315787 ~ 25321025 (+)
AMCG00007640 NA other upstream 304858 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 610027 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1134429 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1610987 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1664987 23133811 ~ 23139521 (+)
G25822 NA other downstream 3278334 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3633156 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3876683 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 4094570 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4197607 29003095 ~ 29006379 (+)

Expression


Co-expression Network