AMCG00007659


Basic Information

Item Value
gene id AMCG00007659
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24795449 ~ 24799006 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007659
CTCCACGACACGGAACCAGGCTTGACCAGCAGTGATGCTGACACAGTGAGAGTCCTGCTTCCAGTGAGACTCACTGGCTGTGCTGGCGACCATGAAACCCCGGAGCAGAGATTGGGTGGAAATGAGGATCAAAATccggggaaggagggagggaagccCTGCCCCCTGATCAAGGCGAGCTGGAGCCGCCGGGCTGCACTGGCGCAGGGAGGTGATGGGCACATCTGTCTGTCAGGTTTTGGGGCTAACCCAGCCAATCAGAAAGGCTGTAGCCATGTTTCTGGATCAGAAGGCTGCCAGGACGCCCTTATTAGTGAGAAATGCATGACTCTGGCCTTCACGGACAGAGTGGAATGCTGGGATGTTGAAGGAATGGAAGTCAAACCTGTCTGGAAGATGGAGCACTCTAGTGTGGATAAAGCAGGGTTTTCCTCCGCCCTGCCACTGGTTCCTGGCGGGTATGTCACTCAGAGTCCCCCTTTCTATCGGCCCCTGTCTCCAGAGCTCCGTGCCTGCAGCCTGGCCCTGGGCACAGACCACGCTGTCCTGCTGAGCGCCACTGGGACCGTGTACACCTGGGGCTCTGGGAGTCATGGCCAGCTGGGTCACGGTGGGCTGGACAGTCAGGCTGAGCCCCAGGCTGTGGAGGCGCTGTGGGGTCTGCCCATGGGAGGGGTGGCAGCGGGGGGATGGCACTCTGTCTGCGTCAGTGCGGGAGGAGACCTGTACGTGTGGGGCTGGAATGAGAGCGGTCAGCTGGGACTGCCCTCTAGGGCCCTGAGAGCAGAACTGCAGCTCAGAGTCCCCGACAGCACCAGTGGAACACAAGAACAGGGAGACACTTCAGAGGTGTTCATCTCAATCCAGGCCTTCCCTGCCCTAGTGGACCTGCctcaggggtcagaggtcaccaGGGTTGGCTGTGGGTCACGCCACACAGCAGCAGTCACATGTGAAGGAGATCTCTATACGTGGGGTTGGGGCAACTATGGGCAGCTGGGCCAGGGGGCTGCCAGCAGTTCAGACCGGCCTGTGCGTGTGCAGTATTTCCCCGATGGCCAGCTGTGTGTCGTGGATGTGGTGTGTGGGTCTTGGAACACCTTTGTGTGGGCGATACACGGAGACGCTGCTCTCTCCTGA

Function

GO:

id name namespace
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0033554 cellular response to stress biological_process
GO:0006281 DNA repair biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007659 True 1140 mRNA 0.60 8 24795449 24799006

Neighbor

gene id symbol gene type direction distance location
AMCG00007657 unc45a coding upstream 1708 24785292 ~ 24793741 (+)
AMCG00007660 NA coding upstream 12324 24781357 ~ 24783125 (+)
AMCG00007655 NA coding upstream 34160 24742934 ~ 24761289 (+)
AMCG00007654 NA coding upstream 57052 24716936 ~ 24738397 (+)
AMCG00007653 LOC106562248,LOC105016086,LOC106587394 coding upstream 90876 24694522 ~ 24704573 (+)
AMCG00007658 NA coding downstream 5502 24804508 ~ 24805488 (+)
AMCG00007665 NA coding downstream 183667 24982673 ~ 24984023 (+)
AMCG00007664 NA coding downstream 185991 24984997 ~ 24988135 (+)
AMCG00007663 parp6,LOC106587213 coding downstream 216670 25015676 ~ 25035688 (+)
AMCG00007670 celf6,LOC104962849,LOC106911022 coding downstream 269055 25068061 ~ 25076698 (+)
G25209 NA non-coding upstream 230597 24554268 ~ 24564852 (+)
G25203 LOC105015055 non-coding upstream 304701 24484286 ~ 24490748 (+)
G25197 LOC105908101 non-coding upstream 322302 24471039 ~ 24473147 (+)
G25196 NA non-coding upstream 325682 24441297 ~ 24469767 (+)
G25148 cdkn2aip,LOC107757748,LOC107695352,LOC107730231,LOC107596431,LOC107701282 non-coding upstream 539536 24254790 ~ 24255913 (+)
G25300 NA non-coding downstream 18336 24817342 ~ 24861868 (+)
G25303 NA non-coding downstream 80359 24879365 ~ 24911371 (+)
G25302 NA non-coding downstream 135473 24934479 ~ 24941580 (+)
G25367 NA non-coding downstream 154119 24953125 ~ 24953328 (+)
G25405 NA non-coding downstream 516781 25315787 ~ 25321025 (+)
AMCG00007640 NA other upstream 295799 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 600968 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1125370 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1601928 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1655928 23133811 ~ 23139521 (+)
G25822 NA other downstream 3284816 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3639638 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3883165 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 4101052 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4204089 29003095 ~ 29006379 (+)

Expression


Co-expression Network