AMCG00007660


Basic Information

Item Value
gene id AMCG00007660
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24781357 ~ 24783125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007660
ATGCCCTCTGCCAGTCTTCTTCAATGCCAGGCTCTGCTCAGGCTCTTACTTCTGCAGAGAGGTGTTCTCTGTGGGGCTGGGATGCTCTGTGAGGGATATTGGGACCCTGCGGGGCTCCACCACTCAGGGTTTTACTGTCCCCGCCTCTCAGATCCTCCTGACCAATCCTACTGCTGCCAGCAGGGAGAACACTCCCTTAAAGACTGCTGCAACCGGTCCGACTTCCAAAGCATCATGAATATCAACCTATCAAAGCATGACAGTGCAGAACTTGTTCACAGacgtcctctctctctcgtggCCGTCCTACTGTATGGGGCTCTGGTCCTGTTCCTGATATCGGTGGATTTCCTTTGGTTTTGCCGGGTGCGAGGGCTCACTGTCACAGCAGCTCTGAGAAAGTACTTCACCTGCCCCCACTGGGCCTCCAGCCTCATCGCTCCCCGTGGCAATCAGCCCCAGCGCTACCATGGCAACAGGAATCCAGATCTACGCAGGCAAAGGACCCCGCAGAGCCCGCCTCGTCTCCACGGCAACTGGAGCCGCAGAGCGCCCAACACAGACTTCAGTAGCAACCAGAATACAGAGCTCTCTCACCTGGACCCTGAAGTGAGCAGCAGAAGGACGGAGGATGATGTGAGGTGGCCAGAGGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007660 True 657 mRNA 0.57 3 24781357 24783125

Neighbor

gene id symbol gene type direction distance location
AMCG00007655 NA coding upstream 20068 24742934 ~ 24761289 (+)
AMCG00007654 NA coding upstream 42960 24716936 ~ 24738397 (+)
AMCG00007653 LOC106562248,LOC105016086,LOC106587394 coding upstream 76784 24694522 ~ 24704573 (+)
AMCG00007649 NA coding upstream 160713 24593296 ~ 24620644 (+)
AMCG00007650 NA coding upstream 194987 24579131 ~ 24586370 (+)
AMCG00007657 unc45a coding downstream 2167 24785292 ~ 24793741 (+)
AMCG00007659 NA coding downstream 12324 24795449 ~ 24799006 (+)
AMCG00007658 NA coding downstream 21383 24804508 ~ 24805488 (+)
AMCG00007665 NA coding downstream 199548 24982673 ~ 24984023 (+)
AMCG00007664 NA coding downstream 201872 24984997 ~ 24988135 (+)
G25209 NA non-coding upstream 216505 24554268 ~ 24564852 (+)
G25203 LOC105015055 non-coding upstream 290609 24484286 ~ 24490748 (+)
G25197 LOC105908101 non-coding upstream 308210 24471039 ~ 24473147 (+)
G25196 NA non-coding upstream 311590 24441297 ~ 24469767 (+)
G25148 cdkn2aip,LOC107757748,LOC107695352,LOC107730231,LOC107596431,LOC107701282 non-coding upstream 525444 24254790 ~ 24255913 (+)
G25300 NA non-coding downstream 34217 24817342 ~ 24861868 (+)
G25303 NA non-coding downstream 96240 24879365 ~ 24911371 (+)
G25302 NA non-coding downstream 151354 24934479 ~ 24941580 (+)
G25367 NA non-coding downstream 170000 24953125 ~ 24953328 (+)
G25405 NA non-coding downstream 532662 25315787 ~ 25321025 (+)
AMCG00007640 NA other upstream 281707 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 586876 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1111278 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1587836 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1641836 23133811 ~ 23139521 (+)
G25822 NA other downstream 3300697 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3655519 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3899046 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 4116933 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4219970 29003095 ~ 29006379 (+)

Expression


Co-expression Network