AMCG00007661


Basic Information

Item Value
gene id AMCG00007661
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24805791 ~ 24810467 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007661
CTTCATATGATGTCCGTGCTGTGGTTTCTTTACTTTGTTTATagattttcacaaaataaatattatgagACATAATCTAATCAACAGAGATTCGAACCGAAAcgcagtaataataattgtagatGTTGTAATAGTTATAACAAAGAGAAAGAGGacagaacgagagagagagagggatgtcGTTTGTTgcttattaattgttattatttattttattaaaaagaatatGGAAGGGAGGGCAATCTGAGCTGTTCGATATATAGGAGAGAAAGAGTAGccatgttttacaaaatgttgtaGTGGATCTTAGtgtatttgtttactgtatatttctcaatcaaaataggaaaaataagaCCCGGCATGACAGCATttcagcaaaacacaacaaatagtAAGTACTGCTTttagtaacagtagtagtaatTATAATATAGACAGATATAATTTAAGGTCCCATGTAAGGCATCCAGTCGGTGTTCTCTTGATTTTGGACAGTCAAACCTCCCAGGCGCTGGGAAGGGCTGCTTGAACACATGCCAGTGAAGGCACTTTTGAGATGGGTGTGAAAACCTGACGGTCCTCCCCCTCATGGCGAGGCTTGTGTATCCAGGTGGCGGAGCTGCCTGGCGACCCAACAACAGTAACACTGGTGTAGAGGAGGACGCGCTCCGGGCATGGGGAGAATGCTTAAATCATCCATCAGACATAAGAAGCCACCTCTTAGCAGCCATTCCAGCACAGcCAGAGATGTAGGGAGCAGTCAGCCTGTGGTTTATCTCTCTCACTCCACTTCCAAAGGGAAGCCCTTCCACACAAAGTCTGGACATATAGATAGCCAGAGATACAGGGGACACCTGCTGCAGGGACAGAAGCAATGGGCTTCAGAGCAACGGGACAAAAAGCGGCAGTCACTactggagctggaggaggctgGGGGCCACAGGAACCCCTGGCAGCCCCTGGCACTGCAGGCCTCAAGTGGGAGTACAGGCCTGGTCCTGCAGAAGGATGCTACCCAGGGGAGTGTCTTCCAGGAAGCAGCAGAGATTCTTGAGGAGCAATTACAACAGGGCTACCAGGAGGAGGCACTGTTACTCAGAAGGTCTCTGGAGAGCATCAGACAGCAGTATGTCATCAGACTGCAGGGGCTGGAGTCCGAGGTGCGCACAGCGGAGCGGGAGAGGGAGCGTGCCCGGCGGGAGAGCAGGGCGGCCAGAGCGGAGCAGCAGGCTCTGCTGCAGGAGCATGGGCAGCTGCTCCACACGCTGCGCAGGGTCAGGGAGAAGCTGGAGCAGCAGGAGGTGCACAGGAGACAATACACCAGGAACCAGGAGGCTCCCCCAGCACTGCACAAAACCAGAGGGAAACAGGGGAAACATCACCCACCTCACTGACCAGGACACTGACCTGTACTTTATTCTGCTCAGTTAACTTGTCAAGTTCTGTATATTATGCATATAcactaattgtttgtttttacaactAGCAGCTCAGATGGATAGTGCACATTacatactgaaatatattatgTTGTACAATTTCATCCACTATTTTACACCCTGTCCCTTTTAAGAATTatgtttgttaaacaaaatatgaaaatagacccgacatttaaaacaatacaattcataataaataattcaccaAGAAGTTTAAATGGCActttaattttcatattttccccACTGTCCTGCTTTTTGTTCCAGttcagctctcaattacttaattgaaaccttaatttaactaataagtttgtttaatttgatggtTAAGCTTAAACCGTTTCAggattaaacttttaaaatctccaATTTATCAAAATTATTCATTAACTCTGAGTTAGGTTGAAACACAAATTAGAAGGACTCTGGTTCCCCAGGACAAGGATTGAGAACCACCGCTTTagaaagacaaaatcaaaaggCTTTGTTGCCTCCACTGGGCAATATTGTCTCTCATTTTCATTCTGGTTCAGTTACAAACAGAAGGCCAACAAGCAAAATCTTATGAATGCTATAGATCTATGttattactgcagcacactacgacgactactactactactactactact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007661 True 2080 mRNA 0.44 6 24805791 24810467

Neighbor

gene id symbol gene type direction distance location
AMCG00007662 cib1 coding downstream 3413 24799840 ~ 24802378 (-)
AMCG00007656 man2a2 coding downstream 26174 24761918 ~ 24779617 (-)
AMCG00007651 NA coding downstream 160427 24629506 ~ 24645364 (-)
AMCG00007652 ckmt1,LOC108418758,LOC105913433,LOC106584654,LOC105028550,LOC107661454,LOC107554962,LOC107753597 coding downstream 181318 24614500 ~ 24624473 (-)
AMCG00007646 pdia3,LOC107716732,LOC107753598,LOC107696263,LOC107661453 coding downstream 235494 24563795 ~ 24570297 (-)
AMCG00007666 NA coding upstream 123841 24934308 ~ 24945796 (-)
AMCG00007668 NA coding upstream 156405 24966872 ~ 24979337 (-)
AMCG00007667 pkm,kpyk coding upstream 179045 24989512 ~ 25006830 (-)
AMCG00007677 NA coding upstream 512621 25323088 ~ 25334806 (-)
AMCG00007678 NA coding upstream 528895 25339362 ~ 25355884 (-)
G25248 NA non-coding downstream 263633 24498365 ~ 24542158 (-)
G25239 NA non-coding downstream 297972 24433080 ~ 24507819 (-)
G25177 NA non-coding downstream 437418 24368169 ~ 24368373 (-)
G25176 NA non-coding downstream 451481 24350030 ~ 24354310 (-)
G25175 NA non-coding downstream 458372 24347099 ~ 24347419 (-)
G25375 NA non-coding upstream 171467 24981934 ~ 24982139 (-)
G25387 NA non-coding upstream 178378 24988845 ~ 24989054 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding upstream 397307 25207774 ~ 25247379 (-)
G25421 NA non-coding upstream 442249 25252716 ~ 25256361 (-)
G25446 NA non-coding upstream 641296 25451763 ~ 25452022 (-)
AMCG00007637 NA other downstream 524227 24262690 ~ 24281564 (-)
G25026 NA other downstream 833126 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1385488 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2229337 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 2447345 22340599 ~ 22358446 (-)
G25422 NA other upstream 453865 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 820325 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1243297 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 2547264 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 4084226 28894693 ~ 28921123 (-)

Expression


Co-expression Network