AMCG00007664


Basic Information

Item Value
gene id AMCG00007664
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24984997 ~ 24988135 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007664
ATGAGGCGGATTAAGTGGATTGCAGATCATTGTGAATGTCGTCTTTCCCCCAGTGGCGTGTCCAGGAAGCGCCAGCTCAGTTTCAATAAGGCCGCTAATCTAAGAACCTGTGTCTCGGCAGATGTGCTTTACATCGGGACGATTCATCCGCAGCACGTCAAAGTGGGCCTGTTATTCCTGAAGTGCAAGAGGAACGTGTTGTGTGAGAAACCCATCGCCATGAATTCCCGAGAACTGCAGCAGCTCATAGCAGCAGCGAAGGAGAACAATGTGTTTTTGATGGAGGCGGTGTGGACACGGTACTTCCCCGCCTCCATCCAGATCAGTAATCTGCTGGCCCAGGAAGCGATAGGAGAAGTGAAAGTGGTGAAGGTTGATTTTGGGGTTCCCCTGCTGCACGTTCCTCGGACTGTGGAGAAGGAACTTGGGGGCAGTGCTCTGATGGATATCGGGGTGTACTGCTTGCAGTTTGTGTGCATGGTGTTCAGCGGAGAGAAACCCGAGTCGGTCACGGCCACAGGAGTCTGTCTGGATACAGGTGTTGATGAAGCGATGACTGTGGTTCTGAAGTATTCCAAGAATAGACTTGCCATATGCACCTGTTCCATTGCTGTACTGCTGCCCAATGATGCCACCATTGTAGGCACAAAAGGGACCATCAAGATCCCTGAGCACATGTGGAGCCCCACGTCTTTGATTGTGAACGGTGAAGAGACCGAGTACCCACTGCCCAAGCCTTCTCTGCCCCTGAACTTTCTCAACAGCACTGGCCTGCGCTATGAGGCTGAAGAAGTCCGTCAGTGTCTTCTGAAAGGCCTGAAGGAGAGCCCTCGGATGACGCTGGCTGACTCGACTCTGCTCATGGAGATCCTGGACGAATCGAGGCGCCAAGTGGGGGTTGTGTACAGGCAGGATTCTGTCTGAGCCTGGGATGCTACACACCCCTTGCCACAGCTGctctccatttttatttatttttaaatacaagacACTAGGCAGTGGTCATTTTCAGTCACACATACCTTTTCACAGTATAGTGAAATCACTCGAATGCCCTTTATTCCTCTACAGGCATATAGTCTTCATTATGTTTCTCATTTAGAGGGGTGTCTTAGTTCATTGTGAACAGTGTCAAAATGTTGTGCAAAGCCCAGAGGTTTTATCAAAGTTCAGAGTTTATAACGCTTACCCCCCCATGTCATCTTTCCTCAATAGTTGCTAGATGGCATCACATGTATTTATGAACATGAGATCATGGAATCAGTAGGTTGGCAAGGGTGGTGGagtttaaaacaattttgtCAATCGATAGGAGATGCAAAGCAGGTGTTTTCCCATCTGTTGATAATGGGTGTTGCATACTAATAAACCAAGAGAGAAAATTACTGTTTGTGATCATTTGCAaattcattgatttttttttttttaagtggggGAATAC

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0047837 D-xylose 1-dehydrogenase (NADP+) activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007664 True 1441 mRNA 0.48 5 24984997 24988135

Neighbor

gene id symbol gene type direction distance location
AMCG00007665 NA coding upstream 974 24982673 ~ 24984023 (+)
AMCG00007658 NA coding upstream 179509 24804508 ~ 24805488 (+)
AMCG00007659 NA coding upstream 185991 24795449 ~ 24799006 (+)
AMCG00007657 unc45a coding upstream 191256 24785292 ~ 24793741 (+)
AMCG00007660 NA coding upstream 201872 24781357 ~ 24783125 (+)
AMCG00007663 parp6,LOC106587213 coding downstream 27541 25015676 ~ 25035688 (+)
AMCG00007670 celf6,LOC104962849,LOC106911022 coding downstream 79926 25068061 ~ 25076698 (+)
AMCG00007669 celf6,LOC103138107 coding downstream 152795 25140930 ~ 25170375 (+)
AMCG00007673 NA coding downstream 244755 25232890 ~ 25233495 (+)
AMCG00007672 LOC103046663,LOC107096723,LOC100697142,LOC101479677,LOC102219286 coding downstream 253819 25241954 ~ 25247349 (+)
G25367 NA non-coding upstream 31669 24953125 ~ 24953328 (+)
G25302 NA non-coding upstream 43417 24934479 ~ 24941580 (+)
G25303 NA non-coding upstream 73626 24879365 ~ 24911371 (+)
G25300 NA non-coding upstream 123129 24817342 ~ 24861868 (+)
G25209 NA non-coding upstream 420145 24554268 ~ 24564852 (+)
G25405 NA non-coding downstream 327652 25315787 ~ 25321025 (+)
G25445 NA non-coding downstream 463398 25451533 ~ 25451793 (+)
G25531 NA non-coding downstream 1065566 26053701 ~ 26061246 (+)
G25561 NA non-coding downstream 1146226 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 1148632 26136767 ~ 26142288 (+)
AMCG00007640 NA other upstream 485347 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 790516 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1314918 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1791476 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1845476 23133811 ~ 23139521 (+)
G25822 NA other downstream 3095687 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3450509 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3694036 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 3911923 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4014960 29003095 ~ 29006379 (+)

Expression


Co-expression Network