AMCG00007666


Basic Information

Item Value
gene id AMCG00007666
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24934308 ~ 24945796 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007666
ACTGAACATCGGCTGGTTAACAAGCTCTGCGATAGCGATCCCACCACACCAGAGCCTAAAATGGGAGCTTGTATGGAGGCCATGTCCGGCTTCTTTAACCGACCCAAGAACACCAATGTAAGGATTAGCCTGCCGGCGGTGTGTTTCGTCTGGCAGATCGTTATGATCATCCTCTTCGGTGTGTTCATGCGTTATGACAAGGAGTCCGATGCCCACTGGTTGGTAACCAAGAAAGAGGAGAATATCACCAGTGACATAGAAAACGACTTTTACTACAGATACCCAAGTTTCCAGGATGTCCACGTGATGATATTCGTGGGCTTTGGTTTCCTCATGACTTTTCTGAGGAAGTACAGCTTCAGTGCAGTCGGCTTCAACTTCCTGATTGCTGCCTTTGGTATCCAGTGGGCCCTTCTGATGCAAGGCTGGTTCCAGTCTCTCGACTACACGGATGGAAAGATCAAGATTGGAGTAGAGAACATGATCAATGCGGATTTCTGTGTGGCTTCCTGTCTGATTGCCTATGGAGCTGTGCTGGGGAAAGTCAGTCCTGTCCAGCTGATGGTGATGACACTGTTTGGAGTAACTCTGTATGCTGTGGAGGAGTACATCATCTCAAATCTCCTTCATGCTCGGGATGCGGGAGGCTCCATGATTATCCACACATTCGGTGCTTATTATGGTCTGACCATCTCCCGAATTCTCTATCGACCGAATctaaatcaaagtaaacaccTGCAAGGCTCTGTCTATCACTCGGATGTTTTTGCCATGGTTGGAACACTTTTCCTTTGGATGTTCTGGCCCAGTTTCAACTCTGCCACCTCAGCCCATGGTGATGGGCAGCACAGGGCCGCCCTCAACACTTACTTGACACTGACAGCAAGCGTCCTCACCACAGTGGCCATCTCCAGTCTGACACAAAAGAAGGGCAAATTGGACATGGTGCACATCCAGAATTCCACACTGGCCGGGGGTGTTGCCGTGGGAACTGCAGCTGAGTTCATGCTGATGCCCTATGGCTGCCTGATCGTGGGTTTCTTCTGTGGTATCATCTCCACGCTGGGCTACATCTATATAACACCTTTCCTGGAGTCTAAGCTCCATATTCAGGACACCTGTGGCATACACAACTTGCATGCCATGCCAGGCTTTATAGGAGGAGTTGTGGGTgctattactgctgctgctgccactgaGTCTGTCTACAGCGCGGAAGGGCTGGCAAACACTTTCAACTTTAACGGGGCCTTTGCGAACCGGCCTCCTACCATACAGGGTGGATACCAGGCAGCTGGGCTGGCTGTGGCACTCGCCTTCGGGTTAGTTGGAGGAACTGTGTTGCCAATCTGGGGTGATCCTGCAGACGAGAACTGCTTTGATGATGAGGTTTACTGGGAGGTGCCCGAAGACGAGGAGAGCATTCCGCCCGTTATGGGATACAACCACCACATGGCCAACAAATACACTGAACAGTCTGATTCGAACTTCACAGTGGAACAGAGCAGCAACTGAGTAGCCCACAGCCACTGTCCCGTCACCTGGCTCATCGCTGGACAGCCATCACCACATCCTCCTCTCCCCACGGCTACTCAGTGCTATGAGTAAGAACCTATAAAACAGGACTCTGTTAAAAACTGTCCTGGGACCAGAGCCAGTATTGTCTACTCCACATCCTCTTTTCAAATCATAAACCTAACCGAAGCCCCTTTTTGCTGACATCAAGCGTCCTGTGCAGATCGTTTGCAAAGCCTTGCAGAACAGGTGCAGTTGGAAGAAGCCCCGGTGTGTGAACTCCTGTGTACAGACAATCTTTATGTGACAGTTTTAATTGGTGTATAAATTTGATGGTCACCTCTGGGATCTGCAGCAACATCAGGTGCAACTTAAGGTGCATCTCCAGTCCCGGAACAAGATGCACCGCAGCATAACTGTGAAAGAGCACTttattgaagattttttttaagcttttgcTAACTAGTGTTAACATGAAGGATTGAAGTTGAAATTGTGCACTGCAATTAACATAGGAATGGAATATAATAagattgtttttgaaatttaacGTATGCTTTCAAAcaaaactttgcttttatttaatcgaggggggggaataaatagaaaaaatacaaatgcactcaatgaaaaagctttgaaatgccTTCTGTTCTTTGCTTTATAATCACCATGCATGTCTAgttaaagaataataaactaTGTTCAGTTTGTCTCTACGTGAACTCTTTCAACACTTCTATTTTCTTGATTGTTAAGCCTTTGTAGATTCCCTcttctacaaaataaaacaaatcctctttgtgttatttttcctGCACCCAACATGGAAGTGAGTACAGGAATGTGTACATCTTATAAGgtaattgattttgttattcagatttcagtaattgtttttatttttatatatatattgtaaataatttggttggtgttggaaaaaaatatgaagtgaTTGCTTTCACATTAGTGTGATGAAATTGTACTCCCTCCCCCGTTTAAAGAAACACTACATTGATGGATAATTAACTGCTTGCATAATGACCTCCGTCCATTTACAGCGTGGTGCATTATGGTACAAAGCAGGGAGACATTGTATTTATGCTGCAAATGCATCACAAAAGAGATCTTTGCACTTCTGGACTAAACTACAGAGCAGAGATGAAAGTATATACTACAAACAtaatttttctaaaatattagAAATCGTTAACACTGTGTTAAAGCTTAGCCGATTGTGAAAGCTGTGTGAAtctctgtttaatatttttctatgaTAATGAATGCACCGGTCATAAACCCTTTTGCTCTTTATGATAAAATGTTGATGTTCAATAATGATTTTTTCTCCTGAGAATACATTTAGGCCTGTATCAGTAATGGTTTGCAACACTTTAGATTGGAAGTTGAATTGTACATTCATAAATTCATTGCGGTCTGAACTATATGAATTGAATTTCATTAACTTGGTTGTAACTGATCTCTACTGCTGATcagttatgtattattattttttggcaatttgttcaatatattaacactttattttatcataCAATGTAAATACTTAGCTTACAgtctgtttaataaataaagtaatgccACAATAACATAAATTGTGTCCTTTTCTTCTCTTATCCATGACATGTAATTTCAGACCTgcatctgtttgtttgcttacaTTCCCTCCAAGGGTATAGATGTGTTCCTCCTGGAGATTAGAACTGCTTCTTTGGATTTATcaaattgtgtgtatatatatatatatatatatagtatttagtattaaatcttacatttgaatgtaaaacCTGTCTCTCCTTGTAAACATcaggtatatttaaaaaaaataaaagac

Function

GO:

id name namespace
GO:0072488 ammonium transmembrane transport biological_process
GO:0015695 organic cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016324 apical plasma membrane cellular_component
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG:

id description
K06580 SLC42A, RHAG, RHBG, RHCG, CD241; ammonium transporter Rh

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007666 True 3376 mRNA 0.42 11 24934308 24945796

Neighbor

gene id symbol gene type direction distance location
AMCG00007661 NA coding downstream 123841 24805791 ~ 24810467 (-)
AMCG00007662 cib1 coding downstream 131930 24799840 ~ 24802378 (-)
AMCG00007656 man2a2 coding downstream 154691 24761918 ~ 24779617 (-)
AMCG00007651 NA coding downstream 288944 24629506 ~ 24645364 (-)
AMCG00007652 ckmt1,LOC108418758,LOC105913433,LOC106584654,LOC105028550,LOC107661454,LOC107554962,LOC107753597 coding downstream 309835 24614500 ~ 24624473 (-)
AMCG00007668 NA coding upstream 21076 24966872 ~ 24979337 (-)
AMCG00007667 pkm,kpyk coding upstream 43716 24989512 ~ 25006830 (-)
AMCG00007677 NA coding upstream 377292 25323088 ~ 25334806 (-)
AMCG00007678 NA coding upstream 393566 25339362 ~ 25355884 (-)
AMCG00007679 NA coding upstream 413983 25359779 ~ 25362397 (-)
G25248 NA non-coding downstream 392150 24498365 ~ 24542158 (-)
G25239 NA non-coding downstream 426489 24433080 ~ 24507819 (-)
G25177 NA non-coding downstream 565935 24368169 ~ 24368373 (-)
G25176 NA non-coding downstream 579998 24350030 ~ 24354310 (-)
G25175 NA non-coding downstream 586889 24347099 ~ 24347419 (-)
G25375 NA non-coding upstream 36138 24981934 ~ 24982139 (-)
G25387 NA non-coding upstream 43049 24988845 ~ 24989054 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding upstream 261978 25207774 ~ 25247379 (-)
G25421 NA non-coding upstream 306920 25252716 ~ 25256361 (-)
G25446 NA non-coding upstream 505967 25451763 ~ 25452022 (-)
AMCG00007637 NA other downstream 652744 24262690 ~ 24281564 (-)
G25026 NA other downstream 961643 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1514005 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2357854 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 2575862 22340599 ~ 22358446 (-)
G25422 NA other upstream 318536 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 684996 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1107968 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 2411935 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3948897 28894693 ~ 28921123 (-)

Expression


Co-expression Network