AMCG00007667 (pkm,kpyk)


Basic Information

Item Value
gene id AMCG00007667
gene name pkm,kpyk
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24989512 ~ 25006830 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007667
ATGTTCAAGCTAGGGTCAAATAAACCTTCTCTGTTGAAATTGGATGCAAGGACAATTCCAGCAGTGACCACCAACATGCCGACTTCAAAGACCCAGGCCCATGACATGGGCACTGCATTCATCCAAACGCAGCAGCTCAACGCGGCCATGGCTGACACGTTCTTGGAACATCTGTGTCTGCTGGACATCGACTCCGAGCCCACCACTGCCCGCAACACTGGCATCATCTGCACCATTGGCCCTGTCTCTCGGTCTGTTGAGACTCTGAAGGAAATGATCAAGTCGGGAATGAACGTGGCACGGATGAACTTCTCTCATGGCACTCATGAGTACCATGCAGACACCATCAAGAATGTGCGAGAAGCCACGGAGAGCTTTGCTGCTAATCCCATCCTCTACAGACCAGTTGCTGTGGCTCTGGACACTAAGGGACCTGAGATCAGAACTGGCCTCATCAAGGGAAGTGGAACTGCTGAGGTCGAGCTGAAGAAAGGAGAGATGCTGAAGGTGACCCTTGATGATGCCTTCAAGGAGAAGTGTGATGAGACCATTATGTGGCTCGACTACAAGAACCTGCCCAAGGTGGTTGAGGTGGGCAGCAAGATCTATGTGGATGATGGGCTCATCTCCCTGTTGGTCAAAGAGATTGGATCTAACTACTGCATGTGTGAGGTGGAGAATGGTGGCTCTCTGGGCAGCAAGAAGGGAGTGAACCTGCCCGGGGCTGCAGTGGACCTGCCGGCCGTCTCGGAGAAGGACGTCCAAGATCTGGAGTTTGGTGTGGAGCAGAATGTAGACATTGTGTTTGCATCCTTCATCCGTAAGGCTGCTGATGTTCATGCTGTGAGGAAAGTGCTGGGAGAGAAGGGCAAGAATATCAAGATCATCAGCAAGATTGAGAACCACGAGGGCGTGCGCAGGTTTGATGAAATCCTGGAAGCCAGTGATGGAATCATGGTTGCCCGTGGAGATCTGGGCATTGAGATTCCTGCCGAAAAAGTCTTCCTTGCACAGAAGATGATGATTGGCCGCTGCAACCGAGCTGGGAAACCAGTCATCTGTGCCACTCAGATGCTGGAGAGCATGATTAAGAAGCCCCGCCCCACCCGTGCGGAGGGCAGTGATGTGGCCAATGCAGTGCTGGATGGAGCAGACTGCATCATGCTAAGTGGAGAGACCGCCAAGGGAGACTACCCCCTCGAGGCTGTGCGCATGCAGCACATGATTGCTCGAGAGGCCGAAGCAGCTATATTCCACCATCAGGTGTTTGCTGATCTTCGCCGCATAACGCCGCACTCCAATGACCCCACCGAGGCTATTGCCATCGGCGCTGTTGAGGCTTCCTTTAAGATCTTAGCTTCAGCTTTCTTAGTTCTGACCGGGTCTGGCAGgcagCCTGCCTTGAACTGCTTTGCCATTTTCAACCTCTGTCCATGTCGCAATGTATGCAATGCTGTGGGAGAGCCCAGGAGAGTTCTAACTAACCCCCTCACCTGCGGGCACTGGTGGCTGCAGATTGCTCGGGAAGCGGAGGCAGCCGTGTTCCACCGGCAGCTGTTCGAGGAGCTGCGCCGCCTTTCCCCCCTGACTCGTGATCCCACTGAAGCCGCTGCCATTGGCGCTGTAGAGTCTGCCTTCAAGTGCTGTGCCAGTGCCCTCATTGTGCTCACCAAGTCTGGCAGGTCCGCCCACCTGATCTCCAAGTACCGCCCCCGCGCCCCAATAATCGCTGTGACCCGTAACGGGCAGACGGCCCGCCAGGCTCACCTGTACCGCGGCGTGTTCCCCGTGCTCTTCACTCAACCTGCCCATGAAGTGTGGGCTGAGGATGTTGACCTGCGTGTCAACTTTGCTATGGAGATTGGCAAGACTCGAGGGTTCTTCAAGAGTGGCGATATGGTCATTGTGCTGACTGGGTGGCGCCCAGGTTCTGGTTACACCAACACCATGCGTGTTGTCCCTGTAGCCTAAACTGAGGGACTGCACTGCTCCCTTCTCTTGCAGCAGCTTGTGAGGCCCCAGTCCTTTCATTTCCTACTGTTCTGTCATGTCATGCTCACCCACTCCTTACAGTTAAGTTCTTTTGATCTAGATAAAAACACCACCAGGCCTTTTGAGGCTTGTGCATTTAAACTGTTTCTGGCCAAAACCCCtccaccattttgtttttctcatctaTGCTAGTCAACCAGGGCACTTGTACTTGTTGCCAGAAcctataatatttattaaaataaactttatctagaacacaaatgcaatttGCTGGGCTTCTGTTTTGGAAAGCAGTTAGGCTGCTGAGGAACAAGGCTCAGGCACCTGGttagaccaaaaaaaaatagtataaaTTTCTCATGATTTCACTGACTGGTGTAACTGTCATATAGAGTTTAACAACCGGTTTACCAATGAACAAATGATGGCTCTTGGAATAAGGGATATGATCAGTGTTGGACAGACCACTAAATAAAACTCCTTTCTCATTAGAGGATTACTACTTTGATTTTTAAAGGATTTGTGACCTATATGAATGTTCCTTGTTTCCAGCTGGGTCTCTCTGTCTAGTCTTGCATTAAAACAGTTGCCTGGGCCTCCTTGCTTACAGTAGTGTTACTCCGTGTCTTGTGTATCTGGCGTcttctgtactgtatttaaatgctgCACTCCACTTACTGTAATCttgcattgttttacattgtggCAATTAAGACAGTGGGCTAccaataactatatatttttaagataaatatttaatcttggACGGCTGAATTGCAGTGGTTTGACTGAAATATTTGAGAAGGGGAAGTAGGAGCCCTGTAAATTCTGTAAAtagccattttgttttcccaaaggATACTTCTCTGTTTTGAAAGCTTCAGTTGTGGGTTTATTCCACAGGGGGGCAGCAGTGACCAGCTTCACAGTTGAGCTGGTGTGGTGTGTGCAATTTTCTCCGTAAGCTTGCTGTAAACCATGGGCTCTTGTGGGGGTCTCGAGTCAACTGAACTTGGTTTCACTTAATGATCCTTTATAAATCTGATCTGGTTAAAGCCAAGAGCCATGAAAAACTAAGCTTATGGTTTGTGATTTTGCTTAACCCTGGAAAAAGGTTTTCAGCCTGTTCTGAGAACCACTTTAAAGTCGCAAAATAGTTAATATGAATGTTAGTCTGCCCTTTGTTGGAGTGCCTGTGGCCTTGGGTACTAAACTTGGGTCAGCACTTTAAGGGTTTCTATAAGGGGATGGTCTTTGCCTTCCCTCTCACCATCCTCTCCCCTGTCAGCTATTTTCAGGTGGAGCACTTGCAATTCTTCCTGTGCTAGAGCCTACACTGGTGTCCTGTCTCGGAGTGATTTagatctgtttttgtgtgttctgCTGTTCTCTGCTAGCTTTCTGATTTGTGGTAACGGTTAAAAATCAATATGGGGAAAAATGTAGAAACCTCTGGTGTATTGAGTTGTCCTGCTTGACTGTGGATTTTCCACCAATAAAGATGAGCACCTGA

Function

symbol description
pkm Enables pyruvate kinase activity. Involved in positive regulation of sprouting angiogenesis and programmed cell death. Located in cytosol and nucleus.

NR:

description
PREDICTED: pyruvate kinase PKM isoform X1

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0016310 phosphorylation biological_process
GO:0030955 potassium ion binding molecular_function
GO:0000287 magnesium ion binding molecular_function
GO:0004743 pyruvate kinase activity molecular_function

KEGG:

id description
K00873 PK, pyk; pyruvate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007667 True 3508 mRNA 0.49 13 24989512 25006830

Neighbor

gene id symbol gene type direction distance location
AMCG00007668 NA coding downstream 10175 24966872 ~ 24979337 (-)
AMCG00007666 NA coding downstream 43716 24934308 ~ 24945796 (-)
AMCG00007661 NA coding downstream 179045 24805791 ~ 24810467 (-)
AMCG00007662 cib1 coding downstream 187134 24799840 ~ 24802378 (-)
AMCG00007656 man2a2 coding downstream 209895 24761918 ~ 24779617 (-)
AMCG00007677 NA coding upstream 316258 25323088 ~ 25334806 (-)
AMCG00007678 NA coding upstream 332532 25339362 ~ 25355884 (-)
AMCG00007679 NA coding upstream 352949 25359779 ~ 25362397 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding upstream 358207 25365037 ~ 25380395 (-)
AMCG00007676 LOC106587228 coding upstream 383359 25390189 ~ 25454403 (-)
G25387 NA non-coding downstream 458 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 7373 24981934 ~ 24982139 (-)
G25248 NA non-coding downstream 447354 24498365 ~ 24542158 (-)
G25239 NA non-coding downstream 481693 24433080 ~ 24507819 (-)
G25177 NA non-coding downstream 621139 24368169 ~ 24368373 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding upstream 200944 25207774 ~ 25247379 (-)
G25421 NA non-coding upstream 245886 25252716 ~ 25256361 (-)
G25446 NA non-coding upstream 444933 25451763 ~ 25452022 (-)
G25615 NA non-coding upstream 1992476 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 2022141 27028971 ~ 27029294 (-)
AMCG00007637 NA other downstream 707948 24262690 ~ 24281564 (-)
G25026 NA other downstream 1016847 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1569209 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2413058 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 2631066 22340599 ~ 22358446 (-)
G25422 NA other upstream 257502 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 623962 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 1046934 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 2350901 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3887863 28894693 ~ 28921123 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location