AMCG00007673


Basic Information

Item Value
gene id AMCG00007673
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25232890 ~ 25233495 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007673
ATGCCACCTGGGGGAATAGGCAAACTAGCACCAGGGAACTTTAAGAAAGTGTGCAAGACAGAGGAGCAGAGCCCCTCACCGTTCCCAGGACTTCCCCCTGATGTGGTGGAGATGCGGGTGAAGGAGGGCAGCAAAATCCGCAACTTGATGGGTTTTGCCATGACGCGGATGGAGAGTGGAGGGTCACGGCAGATCATGTTCAGTGGCTCAGGCCGCGCCGTCACGAAGACCATCACCTGCGTGGAGATCATGAAGCGCAAGATGGGTGGGCTCCACCAGATCACAAAGCTGAGGTACAAAGGCCTTCAGGAGGTGTGGGAGAGCCAAGAGGAAGGGCCTGGTCAGGCCTCAGAGATGACCGTCCACAGAAATGTGCCCTCTGTCTGCATCTTGCTCTCCAAAGACCCCCTGGACCCCCAGGAACATGGATACCAGCCCCCAGAGTCTCTAAGCACCCTCTGGGAAACCAAACAGGAGGAGATCAGAACTGAAAGCCCCTCCCCACAATGCGGCAAGCGTCCGCTCAGCTTTCTAGCAGATGTCAATGAGCCGGAAAGCAAGAGACTCAGTTTGGAGGGAGACCCTTCGAGGTACATGACTGACTGA

Function

GO: NA

KEGG:

id description
K14525 RPP25; ribonucleases P/MRP protein subunit RPP25

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007673 True 606 mRNA 0.56 1 25232890 25233495

Neighbor

gene id symbol gene type direction distance location
AMCG00007669 celf6,LOC103138107 coding upstream 62515 25140930 ~ 25170375 (+)
AMCG00007670 celf6,LOC104962849,LOC106911022 coding upstream 156192 25068061 ~ 25076698 (+)
AMCG00007663 parp6,LOC106587213 coding upstream 197202 25015676 ~ 25035688 (+)
AMCG00007664 NA coding upstream 244755 24984997 ~ 24988135 (+)
AMCG00007665 NA coding upstream 248867 24982673 ~ 24984023 (+)
AMCG00007672 LOC103046663,LOC107096723,LOC100697142,LOC101479677,LOC102219286 coding downstream 8459 25241954 ~ 25247349 (+)
AMCG00007671 NA coding downstream 14306 25247801 ~ 25256361 (+)
AMCG00007674 LOC107097412,LOC102790211 coding downstream 70784 25304279 ~ 25314909 (+)
AMCG00007680 LOC107661444,LOC108436947,LOC107696278 coding downstream 221185 25454680 ~ 25467236 (+)
AMCG00007681 NA coding downstream 301014 25534509 ~ 25534985 (+)
G25367 NA non-coding upstream 279562 24953125 ~ 24953328 (+)
G25302 NA non-coding upstream 291310 24934479 ~ 24941580 (+)
G25303 NA non-coding upstream 321519 24879365 ~ 24911371 (+)
G25300 NA non-coding upstream 371022 24817342 ~ 24861868 (+)
G25209 NA non-coding upstream 668038 24554268 ~ 24564852 (+)
G25405 NA non-coding downstream 82292 25315787 ~ 25321025 (+)
G25445 NA non-coding downstream 218038 25451533 ~ 25451793 (+)
G25531 NA non-coding downstream 820206 26053701 ~ 26061246 (+)
G25561 NA non-coding downstream 900866 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 903272 26136767 ~ 26142288 (+)
AMCG00007640 NA other upstream 733240 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 1038409 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1562811 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 2039369 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 2093369 23133811 ~ 23139521 (+)
G25822 NA other downstream 2850327 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3205149 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3448676 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 3666563 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 3769600 29003095 ~ 29006379 (+)

Expression


Co-expression Network